BLASTX nr result
ID: Cnidium21_contig00003208
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00003208
(1435 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|2... 741 0.0
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi... 737 0.0
ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi... 725 0.0
ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arab... 714 0.0
ref|NP_190263.1| pentatricopeptide repeat-containing protein [Ar... 708 0.0
>ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|222849824|gb|EEE87371.1|
predicted protein [Populus trichocarpa]
Length = 650
Score = 741 bits (1912), Expect = 0.0
Identities = 360/477 (75%), Positives = 412/477 (86%)
Frame = +1
Query: 1 DRFTFTYVLKACVVGEGLSWGLSKGREIHAQILRHGYESHVHVMTTLVDMYARLRCVDDA 180
DRFT+TYVLKACV E L+KGREIHA ILRHGY+ +VH+MTTLVDMYA+ CV +A
Sbjct: 170 DRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNA 229
Query: 181 CFVFNEMTERSVVSWSAMIACYVKNGMSLEALELFREMMVENDDLLPNSVTMVSVLQACT 360
VFN+M ++VVSWSAMIACY KNG + EALELFRE+M+E DL PNSVTMVSVLQAC
Sbjct: 230 SCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACA 289
Query: 361 SLAALEQGKLIHAYVLRKGLDTVLPVTSALATMYARCGDLELGRRVFDQMDRRDVVSWNS 540
+LAALEQG+LIH Y+LRKGLD++LPV SAL TMYARCG LELG+RVFDQMD+RDVVSWNS
Sbjct: 290 ALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNS 349
Query: 541 MISSYGSHGFGRKAIDLFNEMVSSGTKPSLISFVSVLGACSHEGLVEEGKILFESIRKEH 720
+ISSYG HGFG+KAI +F EM +G +PS ISFVSVLGACSH GLV+EGK+LF S+ H
Sbjct: 350 LISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAH 409
Query: 721 GTSPSVEHYACLVDILGRANRLDEAAKVIADMRIEPGPEVWGSLLGSCRIHCNVEFAERA 900
G PSVEHYAC+VD+LGRANRL+EAAK+I +MRIEPGP+VWGSLLGSCRIHCNVE AERA
Sbjct: 410 GICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERA 469
Query: 901 FKRLIQLEPKNAGNYVLMAEIYAEAGMWDDVKRVKSLLETRGIQKLSGCSWIEVKRKIYS 1080
RL LEP NAGNYVL+A+IYAEAGMWD VKRVK LLE RG+QK+ G SWIEVKRKIYS
Sbjct: 470 SIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYS 529
Query: 1081 FMSADELNPQNEQIHALLLKLSTEMKEMGYVPQTKVVLYHLDEEEKERIVLGHSEKLALA 1260
F+S DE+NP+ EQ+HALL+KLS E+KE GYVPQTKVVLY L EKERIVLGHSEKLA+A
Sbjct: 530 FVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVA 589
Query: 1261 YGLINNSKGKTIRITKNLRLCEDCHSFTKFISKFVSREIVVRDVNRIHQFRDGVCSC 1431
+GLIN+SKG+ IRITK+LRLCEDCHSFTKFISKF ++EI+VRDVNR H FRDGVCSC
Sbjct: 590 FGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSC 646
Score = 58.5 bits (140), Expect = 4e-06
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 6/204 (2%)
Frame = +1
Query: 232 MIACYVKNGMSLEALELFREMMVENDDLLPNSV--TMVSVLQACTSLAALEQGKLIHAYV 405
+I K G +ALEL L PN T ++ +CT +L + +H ++
Sbjct: 45 LIQSLCKQGNLTQALELL--------SLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHL 96
Query: 406 LRKGLDTVLPVTSALATMYARCGDLELGRRVFDQMDRRDVVSWNSMISSYGSHGFGRKAI 585
L G D + + L MY+ ++ R+VFD+ R + +N++ + G G + +
Sbjct: 97 LENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVL 156
Query: 586 DLFNEMVSSGTKPSLISFVSVLGAC----SHEGLVEEGKILFESIRKEHGTSPSVEHYAC 753
+++ M S G ++ VL AC L+ +G+ + I + HG V
Sbjct: 157 NMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILR-HGYDGYVHIMTT 215
Query: 754 LVDILGRANRLDEAAKVIADMRIE 825
LVD+ + + A+ V M ++
Sbjct: 216 LVDMYAKFGCVSNASCVFNQMPVK 239
>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 737 bits (1903), Expect = 0.0
Identities = 361/477 (75%), Positives = 410/477 (85%)
Frame = +1
Query: 1 DRFTFTYVLKACVVGEGLSWGLSKGREIHAQILRHGYESHVHVMTTLVDMYARLRCVDDA 180
DRFT+TYVLKACV E L GREIH ILRHG+E HVH+MTTL+DMYAR CV +A
Sbjct: 178 DRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNA 237
Query: 181 CFVFNEMTERSVVSWSAMIACYVKNGMSLEALELFREMMVENDDLLPNSVTMVSVLQACT 360
VF++M ++VVSWSAMIACY KNG LEALELFR+MM+EN DLLPNSVTMVSVLQAC
Sbjct: 238 SRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACA 297
Query: 361 SLAALEQGKLIHAYVLRKGLDTVLPVTSALATMYARCGDLELGRRVFDQMDRRDVVSWNS 540
+LAALEQGKL+H Y+LR+GLD++LPV SAL T+YARCG+LELG RVF++M++RDVVSWNS
Sbjct: 298 ALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNS 357
Query: 541 MISSYGSHGFGRKAIDLFNEMVSSGTKPSLISFVSVLGACSHEGLVEEGKILFESIRKEH 720
+ISSYG HGFGRKAI +F EM+ G PS ISFVSVLGACSH GLVEEGK+LFES+ + H
Sbjct: 358 LISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGH 417
Query: 721 GTSPSVEHYACLVDILGRANRLDEAAKVIADMRIEPGPEVWGSLLGSCRIHCNVEFAERA 900
PSVEHYAC+VD+LGRANRLDEAAK+I DMRIEPGP+VWGSLLGSCRIHCNVE AERA
Sbjct: 418 KIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERA 477
Query: 901 FKRLIQLEPKNAGNYVLMAEIYAEAGMWDDVKRVKSLLETRGIQKLSGCSWIEVKRKIYS 1080
RL +LEP NAGNYVL+A+IYAEA MW++VKRVK LLE RG+QK+ G S IE++RKIYS
Sbjct: 478 TSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYS 537
Query: 1081 FMSADELNPQNEQIHALLLKLSTEMKEMGYVPQTKVVLYHLDEEEKERIVLGHSEKLALA 1260
FMS DE NPQ EQ+HALLLKLS EMKE GYVP TKVVLY LD EEKERIVLGHSEKLALA
Sbjct: 538 FMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALA 597
Query: 1261 YGLINNSKGKTIRITKNLRLCEDCHSFTKFISKFVSREIVVRDVNRIHQFRDGVCSC 1431
+GLIN+ KG+TIRITKNLRLCEDCHS TKFISKF +REI+VRDVNR H F+DGVCSC
Sbjct: 598 FGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRFHLFQDGVCSC 654
Score = 130 bits (326), Expect = 1e-27
Identities = 88/291 (30%), Positives = 153/291 (52%), Gaps = 7/291 (2%)
Frame = +1
Query: 64 LSKGREIHAQILRHGYESHVHVMTTLVDMYARLRCVDDACFVFNEMTERSVVSWSAMIAC 243
L +G ++H ++ G + + T L++MY+ L +D+A VF++ +R++ W+A+
Sbjct: 94 LPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRA 153
Query: 244 YVKNGMSLEALELFREMMVENDDLLPNSVTMVSVLQACTS----LAALEQGKLIHAYVLR 411
G E L+L+R M + + T VL+AC + ++ L G+ IH ++LR
Sbjct: 154 LTLAGYGREVLDLYRRM--NRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILR 211
Query: 412 KGLDTVLPVTSALATMYARCGDLELGRRVFDQMDRRDVVSWNSMISSYGSHGFGRKAIDL 591
G + + + + L MYAR G + RVFDQM ++VVSW++MI+ Y +G +A++L
Sbjct: 212 HGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALEL 271
Query: 592 FNEMV--SSGTKPSLISFVSVLGACSHEGLVEEGKILFESIRKEHGTSPSVEHYACLVDI 765
F +M+ + P+ ++ VSVL AC+ +E+GK++ I + G + + LV +
Sbjct: 272 FRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILR-RGLDSILPVVSALVTV 330
Query: 766 LGRANRLDEAAKVIADMRIEPGPEV-WGSLLGSCRIHCNVEFAERAFKRLI 915
R L+ +V R+E V W SL+ S IH A + FK +I
Sbjct: 331 YARCGNLELGHRVFE--RMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMI 379
Score = 67.0 bits (162), Expect = 1e-08
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Frame = +1
Query: 280 LFREMMVENDDLLPNSVTMVSVLQACTSLAALEQGKLIHAYVLRKGLDTVLPVTSALATM 459
L + + V + + P T ++ +CT +L QG +H +++ G D + + L M
Sbjct: 63 LNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINM 122
Query: 460 YARCGDLELGRRVFDQMDRRDVVSWNSMISSYGSHGFGRKAIDLFNEMVSSGTKPSLISF 639
Y+ ++ R+VFD+ +R + WN++ + G+GR+ +DL+ M G ++
Sbjct: 123 YSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTY 182
Query: 640 VSVLGAC----SHEGLVEEGKILFESIRKEHGTSPSVEHYACLVDILGRANRLDEAAKVI 807
VL AC + L+ G+ + I + HG V L+D+ R + A++V
Sbjct: 183 TYVLKACVASEAFVSLLLNGREIHGHILR-HGFEGHVHIMTTLLDMYARFGCVLNASRVF 241
Query: 808 ADMRIE 825
M ++
Sbjct: 242 DQMPVK 247
>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 725 bits (1871), Expect = 0.0
Identities = 352/477 (73%), Positives = 404/477 (84%)
Frame = +1
Query: 1 DRFTFTYVLKACVVGEGLSWGLSKGREIHAQILRHGYESHVHVMTTLVDMYARLRCVDDA 180
DRFT+TY+LKACV E L L KG+EIHA ILRHGY +HVHVMTTL+DMYAR CV A
Sbjct: 169 DRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYA 228
Query: 181 CFVFNEMTERSVVSWSAMIACYVKNGMSLEALELFREMMVENDDLLPNSVTMVSVLQACT 360
VF+EM ++VVSWSAMIACY KNG EALELFREMM+ D +PNSVTMVSVLQAC
Sbjct: 229 SAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACA 288
Query: 361 SLAALEQGKLIHAYVLRKGLDTVLPVTSALATMYARCGDLELGRRVFDQMDRRDVVSWNS 540
+ AALEQGKLIHAY+LR+GLD++LPV SAL TMYARCG LE G+ +FD+M ++DVV WNS
Sbjct: 289 AFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNS 348
Query: 541 MISSYGSHGFGRKAIDLFNEMVSSGTKPSLISFVSVLGACSHEGLVEEGKILFESIRKEH 720
+ISSYG HG+GRKAI +F EM+ G PS ISF+SVLGACSH GLVEEGK LFES+ KEH
Sbjct: 349 LISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEH 408
Query: 721 GTSPSVEHYACLVDILGRANRLDEAAKVIADMRIEPGPEVWGSLLGSCRIHCNVEFAERA 900
G PSVEHYAC+VD+LGRANRLDEAAK+I D+RIEPGP+VWGSLLG+CRIHC+VE AERA
Sbjct: 409 GIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERA 468
Query: 901 FKRLIQLEPKNAGNYVLMAEIYAEAGMWDDVKRVKSLLETRGIQKLSGCSWIEVKRKIYS 1080
KRL +LEP NAGNYVL+A+IYAEA MWD+VKRVK LL++R +QK+ G SWIEV+RKIYS
Sbjct: 469 SKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYS 528
Query: 1081 FMSADELNPQNEQIHALLLKLSTEMKEMGYVPQTKVVLYHLDEEEKERIVLGHSEKLALA 1260
F S DE NPQ EQ+HALL+ LS EMK+ GY PQTK+VLY LD+EEKERIVLGHSEKLA+A
Sbjct: 529 FTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVA 588
Query: 1261 YGLINNSKGKTIRITKNLRLCEDCHSFTKFISKFVSREIVVRDVNRIHQFRDGVCSC 1431
+GLIN SKG TIRITKNLRLCEDCHS TKFISKF REI+VRD+NR H F+DGVCSC
Sbjct: 589 FGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSC 645
Score = 134 bits (337), Expect = 6e-29
Identities = 91/332 (27%), Positives = 179/332 (53%), Gaps = 9/332 (2%)
Frame = +1
Query: 64 LSKGREIHAQILRHGYESHVHVMTTLVDMYARLRCVDDACFVFNEMTERSVVSWSAMIAC 243
LS ++H ++ G++ + T L++M++ L VD+A VF++ +R++ W+A+
Sbjct: 85 LSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRA 144
Query: 244 YVKNGMSLEALELFREMMVENDDLLPNSVTMVSVLQACTS----LAALEQGKLIHAYVLR 411
G + LEL+ M + + + T +L+AC + ++ L++GK IHA++LR
Sbjct: 145 LALAGRGNDVLELYPRMNMMG--VSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILR 202
Query: 412 KGLDTVLPVTSALATMYARCGDLELGRRVFDQMDRRDVVSWNSMISSYGSHGFGRKAIDL 591
G + V + L MYAR G + VFD+M ++VVSW++MI+ Y +G +A++L
Sbjct: 203 HGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALEL 262
Query: 592 FNEMV--SSGTKPSLISFVSVLGACSHEGLVEEGKILFESIRKEHGTSPSVEHYACLVDI 765
F EM+ + + P+ ++ VSVL AC+ +E+GK++ I + G + + L+ +
Sbjct: 263 FREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILR-RGLDSILPVISALITM 321
Query: 766 LGRANRLDEAAKVIADMRIEPGPEVWGSLLGSCRIHCNVEFAERAFKRLIQ--LEPKNAG 939
R +L E+ ++I D + +W SL+ S +H A + F+ +I P +
Sbjct: 322 YARCGKL-ESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHI- 379
Query: 940 NYVLMAEIYAEAGMWDDVKRV-KSLLETRGIQ 1032
+++ + + G+ ++ K++ +S+++ GIQ
Sbjct: 380 SFISVLGACSHTGLVEEGKKLFESMVKEHGIQ 411
>ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata] gi|297323351|gb|EFH53772.1| hypothetical protein
ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata]
Length = 657
Score = 714 bits (1842), Expect = 0.0
Identities = 345/477 (72%), Positives = 403/477 (84%)
Frame = +1
Query: 1 DRFTFTYVLKACVVGEGLSWGLSKGREIHAQILRHGYESHVHVMTTLVDMYARLRCVDDA 180
DRFT+TYVLKACV E + L+KG+EIHA + R GY SHV++MTTLVDMYAR CVD A
Sbjct: 177 DRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYA 236
Query: 181 CFVFNEMTERSVVSWSAMIACYVKNGMSLEALELFREMMVENDDLLPNSVTMVSVLQACT 360
+VFN M R+VVSWSAMIACY KNG + EAL FREMM E D PNSVTMVSVLQAC
Sbjct: 237 SYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACA 296
Query: 361 SLAALEQGKLIHAYVLRKGLDTVLPVTSALATMYARCGDLELGRRVFDQMDRRDVVSWNS 540
SLAALEQG+LIH Y+LR+GLD++LPV SAL TMY RCG L++G+RVFD+M RDVVSWNS
Sbjct: 297 SLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNS 356
Query: 541 MISSYGSHGFGRKAIDLFNEMVSSGTKPSLISFVSVLGACSHEGLVEEGKILFESIRKEH 720
+ISSYG HG+GRKAI +F EM+++G P+ ++FVSVLGACSHEGLVEEGK LFES+ ++H
Sbjct: 357 LISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDH 416
Query: 721 GTSPSVEHYACLVDILGRANRLDEAAKVIADMRIEPGPEVWGSLLGSCRIHCNVEFAERA 900
G P VEHYAC+VD+LGRANRLDEAAK++ DMR EPGP+VWGSLLGSCRIH NVE AERA
Sbjct: 417 GIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERA 476
Query: 901 FKRLIQLEPKNAGNYVLMAEIYAEAGMWDDVKRVKSLLETRGIQKLSGCSWIEVKRKIYS 1080
+RL LEPKNAGNYVL+A+IYAEA MWD+VKRVK LLE RG+QKL G W+EV+RK+YS
Sbjct: 477 SRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYS 536
Query: 1081 FMSADELNPQNEQIHALLLKLSTEMKEMGYVPQTKVVLYHLDEEEKERIVLGHSEKLALA 1260
F+S DE NP EQIHA L+KL+ +MKE GY+PQTK VLY L+ EEKERIVLGHSEKLALA
Sbjct: 537 FVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALA 596
Query: 1261 YGLINNSKGKTIRITKNLRLCEDCHSFTKFISKFVSREIVVRDVNRIHQFRDGVCSC 1431
+GLIN SKG+ IRITKNLRLCEDCH FTKFISKF+ +EI+VRDVNR H+F++GVCSC
Sbjct: 597 FGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSC 653
Score = 64.3 bits (155), Expect = 8e-08
Identities = 54/257 (21%), Positives = 112/257 (43%), Gaps = 8/257 (3%)
Frame = +1
Query: 217 VSWSAMIACYVKNGMSLEAL----ELFREMMVENDDLLPNSVTMVSVLQACTSLAALEQG 384
+S S+ + N +++L +L + + V + + P+ T ++ C ++L G
Sbjct: 37 LSISSGAGAKISNNQLIQSLCKEGKLKQALRVLSQESSPSQQTYELLILCCGHRSSLSDG 96
Query: 385 KLIHAYVLRKGLDTVLPVTSALATMYARCGDLELGRRVFDQMDRRDVVSWNSMISSYGSH 564
+H ++L G D + + L MY+ G ++ R+VFD+ +R + WN++ +
Sbjct: 97 LRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLA 156
Query: 565 GFGRKAIDLFNEMVSSGTKPSLISFVSVLGACSHEGL----VEEGKILFESIRKEHGTSP 732
G G + + L+ +M G + ++ VL AC + +GK + + + G +
Sbjct: 157 GHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTR-RGYNS 215
Query: 733 SVEHYACLVDILGRANRLDEAAKVIADMRIEPGPEVWGSLLGSCRIHCNVEFAERAFKRL 912
V LVD+ R +D A+ V M + W +++ + A R F+ +
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFNGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREM 274
Query: 913 IQLEPKNAGNYVLMAEI 963
+ ++ N V M +
Sbjct: 275 MTETKDSSPNSVTMVSV 291
>ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis
thaliana] gi|110741961|dbj|BAE98921.1| hypothetical
protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 708 bits (1828), Expect = 0.0
Identities = 343/477 (71%), Positives = 400/477 (83%)
Frame = +1
Query: 1 DRFTFTYVLKACVVGEGLSWGLSKGREIHAQILRHGYESHVHVMTTLVDMYARLRCVDDA 180
DRFT+TYVLKACV E L KG+EIHA + R GY SHV++MTTLVDMYAR CVD A
Sbjct: 177 DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYA 236
Query: 181 CFVFNEMTERSVVSWSAMIACYVKNGMSLEALELFREMMVENDDLLPNSVTMVSVLQACT 360
+VF M R+VVSWSAMIACY KNG + EAL FREMM E D PNSVTMVSVLQAC
Sbjct: 237 SYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACA 296
Query: 361 SLAALEQGKLIHAYVLRKGLDTVLPVTSALATMYARCGDLELGRRVFDQMDRRDVVSWNS 540
SLAALEQGKLIH Y+LR+GLD++LPV SAL TMY RCG LE+G+RVFD+M RDVVSWNS
Sbjct: 297 SLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNS 356
Query: 541 MISSYGSHGFGRKAIDLFNEMVSSGTKPSLISFVSVLGACSHEGLVEEGKILFESIRKEH 720
+ISSYG HG+G+KAI +F EM+++G P+ ++FVSVLGACSHEGLVEEGK LFE++ ++H
Sbjct: 357 LISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDH 416
Query: 721 GTSPSVEHYACLVDILGRANRLDEAAKVIADMRIEPGPEVWGSLLGSCRIHCNVEFAERA 900
G P +EHYAC+VD+LGRANRLDEAAK++ DMR EPGP+VWGSLLGSCRIH NVE AERA
Sbjct: 417 GIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERA 476
Query: 901 FKRLIQLEPKNAGNYVLMAEIYAEAGMWDDVKRVKSLLETRGIQKLSGCSWIEVKRKIYS 1080
+RL LEPKNAGNYVL+A+IYAEA MWD+VKRVK LLE RG+QKL G W+EV+RK+YS
Sbjct: 477 SRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYS 536
Query: 1081 FMSADELNPQNEQIHALLLKLSTEMKEMGYVPQTKVVLYHLDEEEKERIVLGHSEKLALA 1260
F+S DE NP EQIHA L+KL+ +MKE GY+PQTK VLY L+ EEKERIVLGHSEKLALA
Sbjct: 537 FVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALA 596
Query: 1261 YGLINNSKGKTIRITKNLRLCEDCHSFTKFISKFVSREIVVRDVNRIHQFRDGVCSC 1431
+GLIN SKG+ IRITKNLRLCEDCH FTKFISKF+ +EI+VRDVNR H+F++GVCSC
Sbjct: 597 FGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSC 653
Score = 123 bits (309), Expect = 1e-25
Identities = 92/305 (30%), Positives = 152/305 (49%), Gaps = 5/305 (1%)
Frame = +1
Query: 16 TYVLKACVVGEGLSWGLSKGREIHAQILRHGYESHVHVMTTLVDMYARLRCVDDACFVFN 195
TY L G S LS +H IL +G + + T L+ MY+ L VD A VF+
Sbjct: 79 TYELLILCCGHRSS--LSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFD 136
Query: 196 EMTERSVVSWSAMIACYVKNGMSLEALELFREMM---VENDDLLPNSVTMVSVLQACTSL 366
+ +R++ W+A+ G E L L+ +M VE+D V V CT +
Sbjct: 137 KTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT-V 195
Query: 367 AALEQGKLIHAYVLRKGLDTVLPVTSALATMYARCGDLELGRRVFDQMDRRDVVSWNSMI 546
L +GK IHA++ R+G + + + + L MYAR G ++ VF M R+VVSW++MI
Sbjct: 196 NHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMI 255
Query: 547 SSYGSHGFGRKAIDLFNEMV--SSGTKPSLISFVSVLGACSHEGLVEEGKILFESIRKEH 720
+ Y +G +A+ F EM+ + + P+ ++ VSVL AC+ +E+GK++ I +
Sbjct: 256 ACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR-R 314
Query: 721 GTSPSVEHYACLVDILGRANRLDEAAKVIADMRIEPGPEVWGSLLGSCRIHCNVEFAERA 900
G + + LV + GR +L+ +V D + W SL+ S +H + A +
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVF-DRMHDRDVVSWNSLISSYGVHGYGKKAIQI 373
Query: 901 FKRLI 915
F+ ++
Sbjct: 374 FEEML 378
Score = 65.5 bits (158), Expect = 3e-08
Identities = 62/302 (20%), Positives = 128/302 (42%), Gaps = 22/302 (7%)
Frame = +1
Query: 247 VKNGMSLEAL----ELFREMMVENDDLLPNSVTMVSVLQACTSLAALEQGKLIHAYVLRK 414
+ N +++L +L + + V + + P+ T ++ C ++L +H ++L
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDN 106
Query: 415 GLDTVLPVTSALATMYARCGDLELGRRVFDQMDRRDVVSWNSMISSYGSHGFGRKAIDLF 594
G D + + L MY+ G ++ R+VFD+ +R + WN++ + G G + + L+
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 595 NEMVSSGTKPSLISFVSVLGAC-SHEGLVE---EGKILFESIRKEHGTSPSVEHYACLVD 762
+M G + ++ VL AC + E V +GK + + + G S V LVD
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTR-RGYSSHVYIMTTLVD 225
Query: 763 ILGRANRLDEAAKVIADMRIEPGPEVWGSLLGSCRIHCNVEFAERAFKRLIQLEPKNAGN 942
+ R +D A+ V M + W +++ + A R F+ +++ ++ N
Sbjct: 226 MYARFGCVDYASYVFGGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPN 284
Query: 943 YVLMAEIY---AEAGMWDDVKRVKSLLETRGIQKL-----------SGCSWIEVKRKIYS 1080
V M + A + K + + RG+ + C +EV ++++
Sbjct: 285 SVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFD 344
Query: 1081 FM 1086
M
Sbjct: 345 RM 346