BLASTX nr result

ID: Cnidium21_contig00003187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003187
         (1642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   637   e-180
ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   637   e-180
emb|CBI34896.3| unnamed protein product [Vitis vinifera]              637   e-180
ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putativ...   633   e-179
ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   628   e-177

>ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 2
            [Vitis vinifera]
          Length = 828

 Score =  637 bits (1642), Expect = e-180
 Identities = 317/357 (88%), Positives = 338/357 (94%)
 Frame = +1

Query: 379  AGFPAPTPIQAQSWPIALQNRDIVAIAKTGSGKTLGYLIPAFMHLKRVRKNPQMGPTVLV 558
            AGF APTPIQAQSWP+ALQ+RDIVAIAKTGSGKTLGYLIP F+HLKR+R NPQMGPTVLV
Sbjct: 181  AGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNNPQMGPTVLV 240

Query: 559  LSPTRELATQIQDEAVKFGRSARISCTCLYGGAPKGPQLRDLSRGVDIVVATPGRLNDIL 738
            LSPTRELATQIQDEAVKFGRS+R+SCTCLYGGAPKGPQLRDL RG DIVVATPGRLNDIL
Sbjct: 241  LSPTRELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVVATPGRLNDIL 300

Query: 739  EMRRVSLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMYTATWPKEVRKIAAD 918
            EMRRVSL QVSYLVLDEADRMLDMGFEPQIRKIVKEVP RRQTLMYTATWPKEVRKIAAD
Sbjct: 301  EMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAAD 360

Query: 919  LLVNPVQVNIGNVNELVANKSITQNVEIVSPMEKQRRVEQIVRSQEPGSKIIIFCSTKKM 1098
            LLVNPVQVNIGNV+ELVANK+ITQ VE++  MEK +R+EQI+RSQEPGSKIIIFCSTKKM
Sbjct: 361  LLVNPVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKIIIFCSTKKM 420

Query: 1099 CDQLTRSLSRLFGTAAIHGDKSQGERDYVLNQFRTGRCPVLVATDVAARGLDIKDIRVVI 1278
            CDQL R+L+R FG AAIHGDKSQGERDYVLNQFRTGR PVLVATDVAARGLDIKDIRVVI
Sbjct: 421  CDQLARNLTRPFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDIRVVI 480

Query: 1279 NYDFPNGVEDYVHRIGRTGRAGASGIAYTFLGDKDAKHASDLIKVLEGANQRVPNEI 1449
            NYDFP GVEDYVHRIGRTGRAGA+G+AYTF  ++DAK+ASDL+KVLEGANQRVP EI
Sbjct: 481  NYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQRVPPEI 537


>ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 1
            [Vitis vinifera]
          Length = 863

 Score =  637 bits (1642), Expect = e-180
 Identities = 317/357 (88%), Positives = 338/357 (94%)
 Frame = +1

Query: 379  AGFPAPTPIQAQSWPIALQNRDIVAIAKTGSGKTLGYLIPAFMHLKRVRKNPQMGPTVLV 558
            AGF APTPIQAQSWP+ALQ+RDIVAIAKTGSGKTLGYLIP F+HLKR+R NPQMGPTVLV
Sbjct: 181  AGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNNPQMGPTVLV 240

Query: 559  LSPTRELATQIQDEAVKFGRSARISCTCLYGGAPKGPQLRDLSRGVDIVVATPGRLNDIL 738
            LSPTRELATQIQDEAVKFGRS+R+SCTCLYGGAPKGPQLRDL RG DIVVATPGRLNDIL
Sbjct: 241  LSPTRELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVVATPGRLNDIL 300

Query: 739  EMRRVSLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMYTATWPKEVRKIAAD 918
            EMRRVSL QVSYLVLDEADRMLDMGFEPQIRKIVKEVP RRQTLMYTATWPKEVRKIAAD
Sbjct: 301  EMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAAD 360

Query: 919  LLVNPVQVNIGNVNELVANKSITQNVEIVSPMEKQRRVEQIVRSQEPGSKIIIFCSTKKM 1098
            LLVNPVQVNIGNV+ELVANK+ITQ VE++  MEK +R+EQI+RSQEPGSKIIIFCSTKKM
Sbjct: 361  LLVNPVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKIIIFCSTKKM 420

Query: 1099 CDQLTRSLSRLFGTAAIHGDKSQGERDYVLNQFRTGRCPVLVATDVAARGLDIKDIRVVI 1278
            CDQL R+L+R FG AAIHGDKSQGERDYVLNQFRTGR PVLVATDVAARGLDIKDIRVVI
Sbjct: 421  CDQLARNLTRPFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDIRVVI 480

Query: 1279 NYDFPNGVEDYVHRIGRTGRAGASGIAYTFLGDKDAKHASDLIKVLEGANQRVPNEI 1449
            NYDFP GVEDYVHRIGRTGRAGA+G+AYTF  ++DAK+ASDL+KVLEGANQRVP EI
Sbjct: 481  NYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQRVPPEI 537


>emb|CBI34896.3| unnamed protein product [Vitis vinifera]
          Length = 1180

 Score =  637 bits (1642), Expect = e-180
 Identities = 317/357 (88%), Positives = 338/357 (94%)
 Frame = +1

Query: 379  AGFPAPTPIQAQSWPIALQNRDIVAIAKTGSGKTLGYLIPAFMHLKRVRKNPQMGPTVLV 558
            AGF APTPIQAQSWP+ALQ+RDIVAIAKTGSGKTLGYLIP F+HLKR+R NPQMGPTVLV
Sbjct: 40   AGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNNPQMGPTVLV 99

Query: 559  LSPTRELATQIQDEAVKFGRSARISCTCLYGGAPKGPQLRDLSRGVDIVVATPGRLNDIL 738
            LSPTRELATQIQDEAVKFGRS+R+SCTCLYGGAPKGPQLRDL RG DIVVATPGRLNDIL
Sbjct: 100  LSPTRELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVVATPGRLNDIL 159

Query: 739  EMRRVSLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMYTATWPKEVRKIAAD 918
            EMRRVSL QVSYLVLDEADRMLDMGFEPQIRKIVKEVP RRQTLMYTATWPKEVRKIAAD
Sbjct: 160  EMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAAD 219

Query: 919  LLVNPVQVNIGNVNELVANKSITQNVEIVSPMEKQRRVEQIVRSQEPGSKIIIFCSTKKM 1098
            LLVNPVQVNIGNV+ELVANK+ITQ VE++  MEK +R+EQI+RSQEPGSKIIIFCSTKKM
Sbjct: 220  LLVNPVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKIIIFCSTKKM 279

Query: 1099 CDQLTRSLSRLFGTAAIHGDKSQGERDYVLNQFRTGRCPVLVATDVAARGLDIKDIRVVI 1278
            CDQL R+L+R FG AAIHGDKSQGERDYVLNQFRTGR PVLVATDVAARGLDIKDIRVVI
Sbjct: 280  CDQLARNLTRPFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDIRVVI 339

Query: 1279 NYDFPNGVEDYVHRIGRTGRAGASGIAYTFLGDKDAKHASDLIKVLEGANQRVPNEI 1449
            NYDFP GVEDYVHRIGRTGRAGA+G+AYTF  ++DAK+ASDL+KVLEGANQRVP EI
Sbjct: 340  NYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQRVPPEI 396


>ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223539345|gb|EEF40936.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 781

 Score =  633 bits (1632), Expect = e-179
 Identities = 313/357 (87%), Positives = 341/357 (95%)
 Frame = +1

Query: 379  AGFPAPTPIQAQSWPIALQNRDIVAIAKTGSGKTLGYLIPAFMHLKRVRKNPQMGPTVLV 558
            AGF  PTPIQAQSWPIALQ++DIVAIAKTGSGKTLGYL+P F+HLKR R +PQ+GPTVLV
Sbjct: 181  AGFSVPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPGFIHLKRCRNDPQLGPTVLV 240

Query: 559  LSPTRELATQIQDEAVKFGRSARISCTCLYGGAPKGPQLRDLSRGVDIVVATPGRLNDIL 738
            LSPTRELATQIQDEAVKFGRS+RISCTCLYGGAPKGPQL++L RGVDIVVATPGRLNDIL
Sbjct: 241  LSPTRELATQIQDEAVKFGRSSRISCTCLYGGAPKGPQLKELDRGVDIVVATPGRLNDIL 300

Query: 739  EMRRVSLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMYTATWPKEVRKIAAD 918
            EMRR+SLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVP+RRQTLMYTATWP+EVRKIAAD
Sbjct: 301  EMRRISLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPSRRQTLMYTATWPREVRKIAAD 360

Query: 919  LLVNPVQVNIGNVNELVANKSITQNVEIVSPMEKQRRVEQIVRSQEPGSKIIIFCSTKKM 1098
            LLVNPVQVNIGNV+ELVANKSITQ +E+++PMEK RR+EQI+RSQEPGSKIIIFCSTKKM
Sbjct: 361  LLVNPVQVNIGNVDELVANKSITQYIEVLAPMEKHRRLEQILRSQEPGSKIIIFCSTKKM 420

Query: 1099 CDQLTRSLSRLFGTAAIHGDKSQGERDYVLNQFRTGRCPVLVATDVAARGLDIKDIRVVI 1278
            CDQL R+L+R FG AAIHGDKSQ ERD+VL+QFRTGR PVLVATDVAARGLDIKDIRVVI
Sbjct: 421  CDQLARNLTRTFGAAAIHGDKSQSERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVI 480

Query: 1279 NYDFPNGVEDYVHRIGRTGRAGASGIAYTFLGDKDAKHASDLIKVLEGANQRVPNEI 1449
            NYDFP GVEDYVHRIGRTGRAGA+G+AYTF GD+DAK+ASDLIKVLEGA+QRVP EI
Sbjct: 481  NYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGDQDAKYASDLIKVLEGASQRVPPEI 537


>ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Cucumis
            sativus]
          Length = 778

 Score =  628 bits (1620), Expect = e-177
 Identities = 309/357 (86%), Positives = 340/357 (95%)
 Frame = +1

Query: 379  AGFPAPTPIQAQSWPIALQNRDIVAIAKTGSGKTLGYLIPAFMHLKRVRKNPQMGPTVLV 558
            AGF APTPIQAQSWPIALQ+RDIVAIAKTGSGKTLGYLIP F+HLKR+R +P++GPTVLV
Sbjct: 179  AGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNDPKLGPTVLV 238

Query: 559  LSPTRELATQIQDEAVKFGRSARISCTCLYGGAPKGPQLRDLSRGVDIVVATPGRLNDIL 738
            LSPTRELATQIQDEAVKFG+S+RISC CLYGGAPKG QLRD+ RGVDIVVATPGRLNDIL
Sbjct: 239  LSPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGLQLRDIDRGVDIVVATPGRLNDIL 298

Query: 739  EMRRVSLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMYTATWPKEVRKIAAD 918
            EMRR+SL QVSYLVLDEADRMLDMGFEPQIRKIVKEVP RRQTLMYTATWPKEVRKIA+D
Sbjct: 299  EMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIASD 358

Query: 919  LLVNPVQVNIGNVNELVANKSITQNVEIVSPMEKQRRVEQIVRSQEPGSKIIIFCSTKKM 1098
            LLVNP+QVNIGNV+ELVANKSITQ++E ++P+EK RR+EQI+RSQEPGSK+IIFCSTKKM
Sbjct: 359  LLVNPIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSKVIIFCSTKKM 418

Query: 1099 CDQLTRSLSRLFGTAAIHGDKSQGERDYVLNQFRTGRCPVLVATDVAARGLDIKDIRVVI 1278
            CDQL R+L+R FG AAIHGDKSQGERD+VL QFRTGR PVLVATDVAARGLDIKDIRVVI
Sbjct: 419  CDQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARGLDIKDIRVVI 478

Query: 1279 NYDFPNGVEDYVHRIGRTGRAGASGIAYTFLGDKDAKHASDLIKVLEGANQRVPNEI 1449
            NYDFP+GVEDYVHRIGRTGRAGA+GIAYTF G++DAK+ASDLIK+LEGANQRVP E+
Sbjct: 479  NYDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPPEL 535


Top