BLASTX nr result
ID: Cnidium21_contig00003168
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00003168
(1399 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3... 687 0.0
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera] 681 0.0
ref|XP_002533531.1| nonsense-mediated mRNA decay protein, putati... 670 0.0
ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|2... 663 0.0
ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|2... 662 0.0
>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
Length = 510
Score = 687 bits (1773), Expect = 0.0
Identities = 335/443 (75%), Positives = 379/443 (85%)
Frame = -1
Query: 1399 TWIKAQLESKELLTFCXXXXXXXXXXXXVDAGFIWTEPHSXXXXXXXXXXXXXLNGAVLE 1220
TWIKAQLESKELLTFC + A FIWTEPHS LNGA+LE
Sbjct: 69 TWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKEVLNGAILE 128
Query: 1219 QTCTVEYVVQDQMCESCTRVQANPDQWVAAVQLRQHVSHRRTFFFLEQLILKHDAAARAI 1040
Q VE+V Q+ MCESC+RVQANPDQWVA+VQLRQHV HRRTFF+LEQLIL+HDAA RAI
Sbjct: 129 QAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILRHDAAGRAI 188
Query: 1039 RISQMDQGIDFFFANRSHGVKFVEFLGKVAPIKSRSDKQLVSHDTKSNNYNYKHTFSVEL 860
+I QMDQGIDFFFANRSHGVKFVEF+GKV P +SR DKQLVSHDTKSNNYNYK+TFSVE+
Sbjct: 189 KIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNYKYTFSVEI 248
Query: 859 CPICREDLICLPPKVSASLGHLGPLVICTKVSNNIVLLDPFTLRHCFLDADQYWRSAFTS 680
CPICREDLICLPPKV+ SLG+LGPLVICTKVSNNI LLDPFTLRHCFLDADQYWRS+F +
Sbjct: 249 CPICREDLICLPPKVAVSLGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRSSFKA 308
Query: 679 LLSSRQLVEYIVLDIESCDSEVTIGGSKYLLADAQVARLSDFGKNDAIFFVKTHLGHLLS 500
LLSSRQLVEYIVLD+E SEV +GGSKY LADAQVAR+SDFGKND IF ++THLGHLL+
Sbjct: 309 LLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKNDTIFNIRTHLGHLLN 368
Query: 499 PGDYALGYDLHAANTNDMELNKYKGFVLPDVVLLKKSYEEKRMKKRGKPRAWKLKSLGME 320
PGD+ALGYD++AAN+NDMEL KY+GFVLP+ +L+KKSYEEKR +KRGKPR+WKLKSL ME
Sbjct: 369 PGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKSLNME 428
Query: 319 IDDSAKGKYDEEKMDAEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASVTDGEDAPTV 140
+DDS KG+ D+EKM+ EYE FLRDLEE+PELRFN+SLYRNKEYQPSEMAS+TDGED P+V
Sbjct: 429 VDDS-KGRADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSEMASMTDGEDLPSV 487
Query: 139 PLDELLGDLNLSEAETVYDDMKE 71
PL+ELL DL+LSE E M+E
Sbjct: 488 PLEELLADLDLSEEEDGDVSMRE 510
>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
Length = 594
Score = 681 bits (1757), Expect = 0.0
Identities = 329/434 (75%), Positives = 375/434 (86%)
Frame = -1
Query: 1399 TWIKAQLESKELLTFCXXXXXXXXXXXXVDAGFIWTEPHSXXXXXXXXXXXXXLNGAVLE 1220
TWIKAQLESKELLTFC + A FIWTEPHS LNGA+LE
Sbjct: 69 TWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKEVLNGAILE 128
Query: 1219 QTCTVEYVVQDQMCESCTRVQANPDQWVAAVQLRQHVSHRRTFFFLEQLILKHDAAARAI 1040
Q VE+V Q+ MCESC+RVQANPDQWVA+VQLRQHV HRRTFF+LEQLIL+HDAA RAI
Sbjct: 129 QAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILRHDAAGRAI 188
Query: 1039 RISQMDQGIDFFFANRSHGVKFVEFLGKVAPIKSRSDKQLVSHDTKSNNYNYKHTFSVEL 860
+I QMDQGIDFFFANRSHGVKFVEF+GKV P +SR DKQLVSHDTKSNNYNYK+TFSVE+
Sbjct: 189 KIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNYKYTFSVEI 248
Query: 859 CPICREDLICLPPKVSASLGHLGPLVICTKVSNNIVLLDPFTLRHCFLDADQYWRSAFTS 680
CPICREDLICLPPKV+ SLG+LGP+VICTKVSNNI LLDPFTLRHCFLDADQYWRS+F +
Sbjct: 249 CPICREDLICLPPKVAVSLGNLGPVVICTKVSNNIALLDPFTLRHCFLDADQYWRSSFKA 308
Query: 679 LLSSRQLVEYIVLDIESCDSEVTIGGSKYLLADAQVARLSDFGKNDAIFFVKTHLGHLLS 500
LLSSRQLVEYIVLD+E SEV +GGSKY LADAQVAR+SDFGKND IF ++THLGHLL+
Sbjct: 309 LLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKNDTIFNIRTHLGHLLN 368
Query: 499 PGDYALGYDLHAANTNDMELNKYKGFVLPDVVLLKKSYEEKRMKKRGKPRAWKLKSLGME 320
PGD+ALGYD++AAN+NDMEL KY+GFVLP+ +L+KKSYEEKR +KRGKPR+WKLKSL ME
Sbjct: 369 PGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKSLNME 428
Query: 319 IDDSAKGKYDEEKMDAEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASVTDGEDAPTV 140
+DDS KG+ D+EKM+ EYE FLRDLEE+PELRFN+SLYRNKEYQPSEMAS+TDGED P+V
Sbjct: 429 VDDS-KGRADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSEMASMTDGEDLPSV 487
Query: 139 PLDELLGDLNLSEA 98
PL+ELL DL+L+ +
Sbjct: 488 PLEELLADLDLTSS 501
>ref|XP_002533531.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223526598|gb|EEF28848.1| nonsense-mediated mRNA decay
protein, putative [Ricinus communis]
Length = 511
Score = 670 bits (1729), Expect = 0.0
Identities = 328/444 (73%), Positives = 373/444 (84%), Gaps = 1/444 (0%)
Frame = -1
Query: 1399 TWIKAQLESKELLTFCXXXXXXXXXXXXV-DAGFIWTEPHSXXXXXXXXXXXXXLNGAVL 1223
T IKAQLESKEL+TFC + A FIWTEPHS GAVL
Sbjct: 69 TRIKAQLESKELMTFCVRTLDLKHAGVTLVHAEFIWTEPHSKRIKLRCRVQKEVHRGAVL 128
Query: 1222 EQTCTVEYVVQDQMCESCTRVQANPDQWVAAVQLRQHVSHRRTFFFLEQLILKHDAAARA 1043
EQ+ VE+V Q+ MCESC+RVQANPDQWVA+VQLRQHVSHRRTFF+LEQLILKHDAAARA
Sbjct: 129 EQSYIVEFVQQESMCESCSRVQANPDQWVASVQLRQHVSHRRTFFYLEQLILKHDAAARA 188
Query: 1042 IRISQMDQGIDFFFANRSHGVKFVEFLGKVAPIKSRSDKQLVSHDTKSNNYNYKHTFSVE 863
I+I QMDQGIDFFF NRSHGVKFVEFLGKVAP++SR DKQLVSHD KSNNYNYK+TFSVE
Sbjct: 189 IKIKQMDQGIDFFFGNRSHGVKFVEFLGKVAPVRSRHDKQLVSHDPKSNNYNYKYTFSVE 248
Query: 862 LCPICREDLICLPPKVSASLGHLGPLVICTKVSNNIVLLDPFTLRHCFLDADQYWRSAFT 683
+ PICREDL+CLPPKV+ SLG+LGPLVICTKV+N+I LLDP TLRHC+LD DQYWRS+F
Sbjct: 249 ISPICREDLVCLPPKVAVSLGNLGPLVICTKVTNSIALLDPLTLRHCYLDGDQYWRSSFK 308
Query: 682 SLLSSRQLVEYIVLDIESCDSEVTIGGSKYLLADAQVARLSDFGKNDAIFFVKTHLGHLL 503
SLL+SRQLVEYIVLD++ EV IG SKY +A+ QVARLSDFGKND IFF+KTHLGH+L
Sbjct: 309 SLLTSRQLVEYIVLDVDIISPEVNIGSSKYAMAEVQVARLSDFGKNDTIFFIKTHLGHIL 368
Query: 502 SPGDYALGYDLHAANTNDMELNKYKGFVLPDVVLLKKSYEEKRMKKRGKPRAWKLKSLGM 323
PGD ALGYDL+ AN+ND+EL+KYKG VLP+ +L+KKSYEEKR +KRGKPRAWKLKSL M
Sbjct: 369 KPGDQALGYDLYGANSNDIELDKYKGLVLPEAILIKKSYEEKRQRKRGKPRAWKLKSLEM 428
Query: 322 EIDDSAKGKYDEEKMDAEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASVTDGEDAPT 143
E+DDS +G+ D+EKMD EYEQFLRDLEEN ELRFNVSLYRNKEYQPSEMASVTDGED P+
Sbjct: 429 EVDDS-RGRNDQEKMDTEYEQFLRDLEENAELRFNVSLYRNKEYQPSEMASVTDGEDVPS 487
Query: 142 VPLDELLGDLNLSEAETVYDDMKE 71
+PL+ELL DL++SE E DDM+E
Sbjct: 488 IPLEELLADLDISEMEDAADDMRE 511
>ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|222848846|gb|EEE86393.1|
predicted protein [Populus trichocarpa]
Length = 511
Score = 663 bits (1710), Expect = 0.0
Identities = 319/444 (71%), Positives = 375/444 (84%), Gaps = 1/444 (0%)
Frame = -1
Query: 1399 TWIKAQLESKELLTFCXXXXXXXXXXXXV-DAGFIWTEPHSXXXXXXXXXXXXXLNGAVL 1223
T I+AQLES+EL+ FC + +A FIWTEPHS L+GA+L
Sbjct: 69 TRIRAQLESRELMAFCLKKLKLKSTGVILVNAEFIWTEPHSKRIKLRVRVQKEVLHGAIL 128
Query: 1222 EQTCTVEYVVQDQMCESCTRVQANPDQWVAAVQLRQHVSHRRTFFFLEQLILKHDAAARA 1043
EQ +EYV QDQMC+SCTRVQANPDQWVA VQLRQHV+HRRTFF+LEQLILKHDAAARA
Sbjct: 129 EQAYVIEYVQQDQMCDSCTRVQANPDQWVAGVQLRQHVAHRRTFFYLEQLILKHDAAARA 188
Query: 1042 IRISQMDQGIDFFFANRSHGVKFVEFLGKVAPIKSRSDKQLVSHDTKSNNYNYKHTFSVE 863
I+I QMD GIDFFFANRSHGVKFV+F+GKVAP+KSR+DKQLVSHDTKSNNYNYKHTFSVE
Sbjct: 189 IKIKQMDHGIDFFFANRSHGVKFVDFVGKVAPVKSRNDKQLVSHDTKSNNYNYKHTFSVE 248
Query: 862 LCPICREDLICLPPKVSASLGHLGPLVICTKVSNNIVLLDPFTLRHCFLDADQYWRSAFT 683
+ PICREDL+CLPP+V+ SLG+LGPLVIC+KV+N+I LLDPFTLRHCFLDADQYWR+ F
Sbjct: 249 ISPICREDLVCLPPRVAVSLGNLGPLVICSKVTNSIALLDPFTLRHCFLDADQYWRTPFK 308
Query: 682 SLLSSRQLVEYIVLDIESCDSEVTIGGSKYLLADAQVARLSDFGKNDAIFFVKTHLGHLL 503
SLL+SRQLVEYIV D++ EV IGGS+Y LADA VAR+SDFGKND +F +KTHLGH+L
Sbjct: 309 SLLTSRQLVEYIVFDVDFVSPEVNIGGSRYALADATVARMSDFGKNDTMFNIKTHLGHIL 368
Query: 502 SPGDYALGYDLHAANTNDMELNKYKGFVLPDVVLLKKSYEEKRMKKRGKPRAWKLKSLGM 323
PGDYALGYDLH AN+NDMEL+KYK V+P+ +L+KKSYEEKR +KRGKPR+WKLKSL M
Sbjct: 369 KPGDYALGYDLHGANSNDMELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKSLNM 428
Query: 322 EIDDSAKGKYDEEKMDAEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASVTDGEDAPT 143
E+DD+ + + D+EKM++EYEQFLRDLEENPELRFNVSLYRNKEYQPSEMAS+TDGED P+
Sbjct: 429 EVDDT-RARGDQEKMNSEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASMTDGEDIPS 487
Query: 142 VPLDELLGDLNLSEAETVYDDMKE 71
+PL+ELL DL + +AE + M+E
Sbjct: 488 IPLEELLADLEIDDAEDEDEGMRE 511
>ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|222848999|gb|EEE86546.1|
predicted protein [Populus trichocarpa]
Length = 511
Score = 662 bits (1707), Expect = 0.0
Identities = 319/444 (71%), Positives = 375/444 (84%), Gaps = 1/444 (0%)
Frame = -1
Query: 1399 TWIKAQLESKELLTFCXXXXXXXXXXXXV-DAGFIWTEPHSXXXXXXXXXXXXXLNGAVL 1223
T I+AQLES+EL+ FC + +A FIWTEPHS L+GA+L
Sbjct: 69 TRIRAQLESRELMAFCLKKLKLKSTGVILVNAEFIWTEPHSKRIKLRVRVQKEVLHGAIL 128
Query: 1222 EQTCTVEYVVQDQMCESCTRVQANPDQWVAAVQLRQHVSHRRTFFFLEQLILKHDAAARA 1043
EQ +EYV QDQMC+SCTRVQANPDQWVA VQLRQHV+HRRTFF+LEQLILKHDAAARA
Sbjct: 129 EQAYVIEYVQQDQMCDSCTRVQANPDQWVAGVQLRQHVAHRRTFFYLEQLILKHDAAARA 188
Query: 1042 IRISQMDQGIDFFFANRSHGVKFVEFLGKVAPIKSRSDKQLVSHDTKSNNYNYKHTFSVE 863
I+I QMD GIDFFFANRSHGVKFV+F+GKVAP+KSR+DKQLVSHDTKSNNYNYKHTFSVE
Sbjct: 189 IKIKQMDHGIDFFFANRSHGVKFVDFVGKVAPVKSRNDKQLVSHDTKSNNYNYKHTFSVE 248
Query: 862 LCPICREDLICLPPKVSASLGHLGPLVICTKVSNNIVLLDPFTLRHCFLDADQYWRSAFT 683
+ PICREDL+CLPP+V+ SLG+LGPLVIC+KV+N+I LLDPFTLRHCFLDADQYWR+ F
Sbjct: 249 ISPICREDLVCLPPRVAVSLGNLGPLVICSKVTNSIALLDPFTLRHCFLDADQYWRTPFK 308
Query: 682 SLLSSRQLVEYIVLDIESCDSEVTIGGSKYLLADAQVARLSDFGKNDAIFFVKTHLGHLL 503
SLL+SRQLVEYIV D++ EV IGGS+Y LADA VAR+SDFGKND +F +KTHLGH+L
Sbjct: 309 SLLTSRQLVEYIVFDVDFVSPEVNIGGSRYALADATVARMSDFGKNDTMFNIKTHLGHIL 368
Query: 502 SPGDYALGYDLHAANTNDMELNKYKGFVLPDVVLLKKSYEEKRMKKRGKPRAWKLKSLGM 323
PGDYALGYDLH AN+NDMEL+KYK V+P+ +L+KKSYEEKR +KRGKPR+WKLKSL M
Sbjct: 369 KPGDYALGYDLHGANSNDMELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKSLNM 428
Query: 322 EIDDSAKGKYDEEKMDAEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASVTDGEDAPT 143
E+DD+ + + D+EKM++EYEQFLRDLEENPELRFNVSLYRNKEYQPSEMAS+TDGED P+
Sbjct: 429 EVDDT-RARGDQEKMNSEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASMTDGEDIPS 487
Query: 142 VPLDELLGDLNLSEAETVYDDMKE 71
+PL+ELL DL +++AE + M E
Sbjct: 488 IPLEELLADLEINDAEDEDEGMGE 511