BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003162
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Ni...    67   2e-09
emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Ni...    67   2e-09
ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum ly...    67   2e-09
emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [So...    67   2e-09
emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Ni...    66   3e-09

>emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Nicotiana
           benthamiana]
          Length = 615

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
 Frame = +3

Query: 93  HTLNGR--DESPAVTQTAPDDAYSFNQRPLETNSRNDDVFNHAAGGFVNIKLSNYTKAEL 266
           H  NGR  DESPAVTQTA DDAYSFNQRP+E +S N D  N   GG++   +++Y K EL
Sbjct: 52  HASNGRQNDESPAVTQTASDDAYSFNQRPIE-SSTNVDGLN--LGGYMTYNVASYNKTEL 108

Query: 267 KEVKRKL 287
            E++ +L
Sbjct: 109 HELRSRL 115


>emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
          Length = 617

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
 Frame = +3

Query: 93  HTLNGR--DESPAVTQTAPDDAYSFNQRPLETNSRNDDVFNHAAGGFVNIKLSNYTKAEL 266
           H  NGR  DESPAVTQTA DDAYSFNQRP+E +S N D  N   GG++   +++Y K EL
Sbjct: 52  HASNGRHNDESPAVTQTASDDAYSFNQRPIE-SSTNVDGLN--LGGYMTYNVASYNKTEL 108

Query: 267 KEVKRKL 287
            E++ +L
Sbjct: 109 HELRSRL 115


>ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
           gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding
           protein Virp1a [Solanum lycopersicum]
           gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding
           protein Virp1b [Solanum lycopersicum]
           gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding
           protein Virp1c [Solanum lycopersicum]
           gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding
           protein Virp1d [Solanum lycopersicum]
           gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein,
           Virp1 [Solanum lycopersicum] gi|13186134|emb|CAC33449.1|
           PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
           gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein,
           Virp1 [Solanum lycopersicum] gi|13186138|emb|CAC33451.1|
           PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
          Length = 602

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
 Frame = +3

Query: 93  HTLNGR--DESPAVTQTAPDDAYSFNQRPLETNSRNDDVFNHAAGGFVNIKLSNYTKAEL 266
           HT NGR  D+SPAVTQTA DDAYSFNQRP+E+ + N D  N   GG++   + +Y KAE+
Sbjct: 52  HTSNGRHMDDSPAVTQTASDDAYSFNQRPIESTT-NVDGLNF--GGYLTFNVVSYNKAEV 108

Query: 267 KEVKRKL 287
            E++ +L
Sbjct: 109 NELRSRL 115


>emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
          Length = 602

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/67 (53%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
 Frame = +3

Query: 93  HTLNGR--DESPAVTQTAPDDAYSFNQRPLETNSRNDDVFNHAAGGFVNIKLSNYTKAEL 266
           HT NGR  DESPAVTQTA DDAYSFNQRP+E+ + N D  N   GG++   + +Y K E+
Sbjct: 52  HTSNGRHIDESPAVTQTASDDAYSFNQRPIESTT-NVDGLNF--GGYLTFNVVSYNKGEV 108

Query: 267 KEVKRKL 287
            E++ +L
Sbjct: 109 NELRSRL 115


>emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Nicotiana tabacum]
          Length = 616

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
 Frame = +3

Query: 93  HTLNGR--DESPAVTQTAPDDAYSFNQRPLETNSRNDDVFNHAAGGFVNIKLSNYTKAEL 266
           H  NGR  DESPAVTQTA DDAYSFNQRP+E +S N D  N   GG++    ++Y K EL
Sbjct: 52  HASNGRLTDESPAVTQTASDDAYSFNQRPIE-SSTNVDGLN--LGGYMTYNXASYNKTEL 108

Query: 267 KEVKRKL 287
            E++ +L
Sbjct: 109 HELRSRL 115