BLASTX nr result

ID: Cnidium21_contig00003159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003159
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN53690.1| acyl CoA ligase [Linum usitatissimum]                  118   4e-25
ref|XP_002877640.1| AMP-dependent synthetase and ligase family p...   114   6e-24
ref|XP_002322473.1| acyl:coa ligase [Populus trichocarpa] gi|222...   114   1e-23
ref|XP_002510783.1| AMP dependent CoA ligase, putative [Ricinus ...   113   1e-23
ref|XP_003534000.1| PREDICTED: putative peroxisomal-coenzyme A s...   111   5e-23

>gb|AFN53690.1| acyl CoA ligase [Linum usitatissimum]
          Length = 512

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/69 (81%), Positives = 67/69 (97%)
 Frame = -1

Query: 209 TLTGLLKQAAVKFPERRAISVSGEFDLTHARLDELIEQAASRLVAAGVKPGDVVALTFPN 30
           TLTGLLK+ A +FP+RRA+SVSG+FDLTHARLDEL+E+AASRLV+AG+KPGDVVALTFPN
Sbjct: 6   TLTGLLKRVAGEFPDRRALSVSGKFDLTHARLDELVERAASRLVSAGIKPGDVVALTFPN 65

Query: 29  TVEFIIMFL 3
           TVEF++MFL
Sbjct: 66  TVEFVVMFL 74


>ref|XP_002877640.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297323478|gb|EFH53899.1|
           AMP-dependent synthetase and ligase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 514

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/74 (78%), Positives = 68/74 (91%), Gaps = 1/74 (1%)
 Frame = -1

Query: 221 MENSTLTGLLKQAAVKFPERRAISVSGEFDLTHARLDELIEQAASRLV-AAGVKPGDVVA 45
           M++ TLTGLL+  A KFP+RRA+SVSG+FDLTHARL +LIE+AASRLV AAG+KPGDVVA
Sbjct: 1   MDSDTLTGLLENVARKFPDRRALSVSGKFDLTHARLHDLIERAASRLVSAAGIKPGDVVA 60

Query: 44  LTFPNTVEFIIMFL 3
           LTFPNTVEF+IMFL
Sbjct: 61  LTFPNTVEFVIMFL 74


>ref|XP_002322473.1| acyl:coa ligase [Populus trichocarpa] gi|222869469|gb|EEF06600.1|
           acyl:coa ligase [Populus trichocarpa]
          Length = 524

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/73 (76%), Positives = 65/73 (89%)
 Frame = -1

Query: 221 MENSTLTGLLKQAAVKFPERRAISVSGEFDLTHARLDELIEQAASRLVAAGVKPGDVVAL 42
           M   TLTGLLK+ A +FP RRA+SVSG+ DLTHARL E+IE+AASRLVA+G+KPGDVVAL
Sbjct: 1   MATLTLTGLLKRVAGEFPNRRAVSVSGKLDLTHARLHEIIERAASRLVASGIKPGDVVAL 60

Query: 41  TFPNTVEFIIMFL 3
           TFPNTVEF+IMFL
Sbjct: 61  TFPNTVEFVIMFL 73


>ref|XP_002510783.1| AMP dependent CoA ligase, putative [Ricinus communis]
           gi|223549898|gb|EEF51385.1| AMP dependent CoA ligase,
           putative [Ricinus communis]
          Length = 521

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/73 (72%), Positives = 69/73 (94%)
 Frame = -1

Query: 221 MENSTLTGLLKQAAVKFPERRAISVSGEFDLTHARLDELIEQAASRLVAAGVKPGDVVAL 42
           M++ TLTGLLK+ A++FP+ RA+SVSG+FDL+H++L+EL++QAASRLVAAG+KP DVVAL
Sbjct: 1   MDSLTLTGLLKRVALEFPDNRAVSVSGKFDLSHSQLNELVDQAASRLVAAGIKPSDVVAL 60

Query: 41  TFPNTVEFIIMFL 3
           TFPNTVEFII+FL
Sbjct: 61  TFPNTVEFIILFL 73


>ref|XP_003534000.1| PREDICTED: putative peroxisomal-coenzyme A synthetase-like [Glycine
           max]
          Length = 518

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/69 (73%), Positives = 63/69 (91%)
 Frame = -1

Query: 209 TLTGLLKQAAVKFPERRAISVSGEFDLTHARLDELIEQAASRLVAAGVKPGDVVALTFPN 30
           TLTGLL+  A KFP RRAISV+G+FDLTH+RL +L+E AA+RLVAAG+KPGDV+ALTFPN
Sbjct: 6   TLTGLLRDVAAKFPSRRAISVAGKFDLTHSRLHQLVESAAARLVAAGIKPGDVIALTFPN 65

Query: 29  TVEFIIMFL 3
           TVEF+++FL
Sbjct: 66  TVEFVVLFL 74


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