BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003140
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containi...   394   e-107
emb|CBI29931.3| unnamed protein product [Vitis vinifera]              387   e-105
ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|2...   386   e-105
ref|NP_193101.2| pentatricopeptide repeat-containing protein [Ar...   347   3e-93
emb|CAB36829.1| putative protein [Arabidopsis thaliana] gi|72680...   347   3e-93

>ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 989

 Score =  394 bits (1013), Expect = e-107
 Identities = 181/217 (83%), Positives = 203/217 (93%)
 Frame = -1

Query: 844  ARKFIEEMPIEPDAMAWRTLLSACTAHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAI 665
            AR+FIEEMPIEPDAM WRTLLSACT HKNIEIGEFAARHLLELEPEDSATYVLLSNMYA+
Sbjct: 773  AREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAV 832

Query: 664  SGKWDYRDHTRQLMKNRGVKKEPGRSWIEVKNSVHAFFVGDRLHPLAGKIYEHLDDLNKR 485
            SGKWDYRD TRQ+MK+RGVKKEPGRSWIEVKNS+HAFFVGDRLHPLA +IYE++DDLN+R
Sbjct: 833  SGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNER 892

Query: 484  ATAVGYVQDRISLWNDIEQGQKDPTTYIHSEKLAITFGLLSLSDTIPLRVIKNLRVCNDC 305
            A  +GYVQDR +L ND+EQ QKDPT YIHSEKLA+ FGLLSL++T+P+RVIKNLRVCNDC
Sbjct: 893  AGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDC 952

Query: 304  HNWIKCVSKVTNRSIIVRDSYRFHHFEDGGCSCKDYW 194
            HNWIK VSK++NR+I+VRD+YRFHHFE G CSCKDYW
Sbjct: 953  HNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989


>emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  387 bits (995), Expect = e-105
 Identities = 177/214 (82%), Positives = 199/214 (92%)
 Frame = -1

Query: 835  FIEEMPIEPDAMAWRTLLSACTAHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAISGK 656
            F+ EMPIEPDAM WRTLLSACT HKNIEIGEFAARHLLELEPEDSATYVLLSNMYA+SGK
Sbjct: 625  FVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGK 684

Query: 655  WDYRDHTRQLMKNRGVKKEPGRSWIEVKNSVHAFFVGDRLHPLAGKIYEHLDDLNKRATA 476
            WDYRD TRQ+MK+RGVKKEPGRSWIEVKNS+HAFFVGDRLHPLA +IYE++DDLN+RA  
Sbjct: 685  WDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGE 744

Query: 475  VGYVQDRISLWNDIEQGQKDPTTYIHSEKLAITFGLLSLSDTIPLRVIKNLRVCNDCHNW 296
            +GYVQDR +L ND+EQ QKDPT YIHSEKLA+ FGLLSL++T+P+RVIKNLRVCNDCHNW
Sbjct: 745  IGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNW 804

Query: 295  IKCVSKVTNRSIIVRDSYRFHHFEDGGCSCKDYW 194
            IK VSK++NR+I+VRD+YRFHHFE G CSCKDYW
Sbjct: 805  IKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 838


>ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|222857540|gb|EEE95087.1|
            predicted protein [Populus trichocarpa]
          Length = 989

 Score =  386 bits (991), Expect = e-105
 Identities = 179/218 (82%), Positives = 198/218 (90%)
 Frame = -1

Query: 847  RARKFIEEMPIEPDAMAWRTLLSACTAHKNIEIGEFAARHLLELEPEDSATYVLLSNMYA 668
            RARKFIEEMPIEPDA  WRTLLSACT HKN+E+GEFAA+HLLELEPEDSATYVLLSNMYA
Sbjct: 772  RARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYA 831

Query: 667  ISGKWDYRDHTRQLMKNRGVKKEPGRSWIEVKNSVHAFFVGDRLHPLAGKIYEHLDDLNK 488
            +SGKWD RD TRQ+M+NRGVKKEPGRSWIEVKNSVHAF+VGDRLHPLA KIYE L +LNK
Sbjct: 832  VSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNK 891

Query: 487  RATAVGYVQDRISLWNDIEQGQKDPTTYIHSEKLAITFGLLSLSDTIPLRVIKNLRVCND 308
            +A  +GY QDR SL ND+EQ QKDPT YIHSEKLAITFGLLSLSDT+P+ V+KNLRVC D
Sbjct: 892  KAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKD 951

Query: 307  CHNWIKCVSKVTNRSIIVRDSYRFHHFEDGGCSCKDYW 194
            CH+WIK VSK++NR+IIVRD+YRFHHFE G CSCKDYW
Sbjct: 952  CHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989


>ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g13650 gi|332657909|gb|AEE83309.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  347 bits (889), Expect = 3e-93
 Identities = 159/218 (72%), Positives = 188/218 (86%)
 Frame = -1

Query: 847  RARKFIEEMPIEPDAMAWRTLLSACTAHKNIEIGEFAARHLLELEPEDSATYVLLSNMYA 668
            RA++FI+EMPI+PDA+ WRTLLSAC  HKN+EIGEFAA HLLELEPEDSATYVLLSN+YA
Sbjct: 847  RAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 906

Query: 667  ISGKWDYRDHTRQLMKNRGVKKEPGRSWIEVKNSVHAFFVGDRLHPLAGKIYEHLDDLNK 488
            +S KWD RD TRQ MK +GVKKEPG+SWIEVKNS+H+F+VGD+ HPLA +I+E+  DL K
Sbjct: 907  VSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTK 966

Query: 487  RATAVGYVQDRISLWNDIEQGQKDPTTYIHSEKLAITFGLLSLSDTIPLRVIKNLRVCND 308
            RA+ +GYVQD  SL N+++  QKDP  +IHSEKLAI+FGLLSL  T+P+ V+KNLRVCND
Sbjct: 967  RASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCND 1026

Query: 307  CHNWIKCVSKVTNRSIIVRDSYRFHHFEDGGCSCKDYW 194
            CH WIK VSKV+NR IIVRD+YRFHHFE G CSCKDYW
Sbjct: 1027 CHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064


>emb|CAB36829.1| putative protein [Arabidopsis thaliana] gi|7268069|emb|CAB78407.1|
            putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  347 bits (889), Expect = 3e-93
 Identities = 159/218 (72%), Positives = 188/218 (86%)
 Frame = -1

Query: 847  RARKFIEEMPIEPDAMAWRTLLSACTAHKNIEIGEFAARHLLELEPEDSATYVLLSNMYA 668
            RA++FI+EMPI+PDA+ WRTLLSAC  HKN+EIGEFAA HLLELEPEDSATYVLLSN+YA
Sbjct: 807  RAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 866

Query: 667  ISGKWDYRDHTRQLMKNRGVKKEPGRSWIEVKNSVHAFFVGDRLHPLAGKIYEHLDDLNK 488
            +S KWD RD TRQ MK +GVKKEPG+SWIEVKNS+H+F+VGD+ HPLA +I+E+  DL K
Sbjct: 867  VSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTK 926

Query: 487  RATAVGYVQDRISLWNDIEQGQKDPTTYIHSEKLAITFGLLSLSDTIPLRVIKNLRVCND 308
            RA+ +GYVQD  SL N+++  QKDP  +IHSEKLAI+FGLLSL  T+P+ V+KNLRVCND
Sbjct: 927  RASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCND 986

Query: 307  CHNWIKCVSKVTNRSIIVRDSYRFHHFEDGGCSCKDYW 194
            CH WIK VSKV+NR IIVRD+YRFHHFE G CSCKDYW
Sbjct: 987  CHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024