BLASTX nr result

ID: Cnidium21_contig00003138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003138
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326121.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat ...   127   1e-27
ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|2235447...   125   4e-27
emb|CBI27815.3| unnamed protein product [Vitis vinifera]              122   2e-26
ref|XP_002278147.1| PREDICTED: uncharacterized protein LOC100244...   122   2e-26

>ref|XP_002326121.1| predicted protein [Populus trichocarpa] gi|222833314|gb|EEE71791.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/116 (61%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
 Frame = +2

Query: 2   IIKERGLNVNLQQKDLSSGKETP-QMTWVPKQEKNHKRSSLSVPLLQDLCMITLTKNADA 178
           II++R   +NLQQ+  +S KE    +TW+PK ++  K S   VP LQ+LCM  L KNADA
Sbjct: 422 IIRDRANRLNLQQRGSTSEKEKHVPITWMPKTDRACKPSKGLVPSLQELCMKILVKNADA 481

Query: 179 ITSLDYVPDVLRHKLSHMLCDMRRMNSHFLELLVRGSPTEIRIRDCSWLSEEDFTK 346
           I SL++VPD LRH+L  +LCD RRMN+HFL LLVRGSP EIRIRDCSWL+EE+FTK
Sbjct: 482 IASLEHVPDALRHRLCQLLCDSRRMNAHFLALLVRGSPMEIRIRDCSWLAEEEFTK 537


>ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat protein C02F5.7-like
           [Glycine max]
          Length = 541

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/116 (54%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
 Frame = +2

Query: 2   IIKERGLNVNLQQKDLSSGKETPQ-MTWVPKQEKNHKRSSLSVPLLQDLCMITLTKNADA 178
           II++RG    LQ  + SS     + + WVP  ++ +   ++SVP LQ++C+  L KN DA
Sbjct: 93  IIRDRGSK--LQNAEASSQASLCESIKWVPNAKRGNAGVNVSVPSLQEMCLKILVKNVDA 150

Query: 179 ITSLDYVPDVLRHKLSHMLCDMRRMNSHFLELLVRGSPTEIRIRDCSWLSEEDFTK 346
           I SL+ VPD LRH+LS +LCD RR+N HFLELLVRG+PTEIR+RDCSWL+EE FT+
Sbjct: 151 IASLESVPDALRHRLSQLLCDSRRINGHFLELLVRGTPTEIRLRDCSWLTEEQFTE 206


>ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|223544769|gb|EEF46285.1| rad7,
           putative [Ricinus communis]
          Length = 765

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/118 (55%), Positives = 85/118 (72%), Gaps = 3/118 (2%)
 Frame = +2

Query: 2   IIKERGLNVNLQQKDLSSGKETPQ---MTWVPKQEKNHKRSSLSVPLLQDLCMITLTKNA 172
           II++R    N QQ   +S  E PQ   +TWVP +   +++S   VP LQ+LCM  + KN 
Sbjct: 305 IIRDRANMRNSQQG--ASTLEKPQSVPITWVPTR---NRQSRTCVPSLQELCMRIIVKNV 359

Query: 173 DAITSLDYVPDVLRHKLSHMLCDMRRMNSHFLELLVRGSPTEIRIRDCSWLSEEDFTK 346
           DA+TSLD+VPD LRH+L  +LCD R+MNS FL+LLVRGSPTEIR++DCSW+SEE+  K
Sbjct: 360 DAVTSLDHVPDALRHRLCQLLCDCRKMNSSFLDLLVRGSPTEIRVKDCSWMSEEELVK 417


>emb|CBI27815.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/115 (50%), Positives = 76/115 (66%)
 Frame = +2

Query: 2   IIKERGLNVNLQQKDLSSGKETPQMTWVPKQEKNHKRSSLSVPLLQDLCMITLTKNADAI 181
           IIK+R    N QQ   S       + W P++ K+ +      P LQ++C+  L +N DAI
Sbjct: 393 IIKDREKKQNTQQNSSSDRNRPAHVIWSPRKVKSSECPKPLAPSLQEMCLEVLAQNGDAI 452

Query: 182 TSLDYVPDVLRHKLSHMLCDMRRMNSHFLELLVRGSPTEIRIRDCSWLSEEDFTK 346
           TSL+ +PD LRHKLS +LCD RRMNSH LELLV GSP E+ +RDCSWL+EE+F +
Sbjct: 453 TSLESIPDALRHKLSQLLCDSRRMNSHILELLVSGSPFEVCVRDCSWLTEEEFAR 507


>ref|XP_002278147.1| PREDICTED: uncharacterized protein LOC100244043 [Vitis vinifera]
          Length = 905

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/115 (50%), Positives = 76/115 (66%)
 Frame = +2

Query: 2   IIKERGLNVNLQQKDLSSGKETPQMTWVPKQEKNHKRSSLSVPLLQDLCMITLTKNADAI 181
           IIK+R    N QQ   S       + W P++ K+ +      P LQ++C+  L +N DAI
Sbjct: 466 IIKDREKKQNTQQNSSSDRNRPAHVIWSPRKVKSSECPKPLAPSLQEMCLEVLAQNGDAI 525

Query: 182 TSLDYVPDVLRHKLSHMLCDMRRMNSHFLELLVRGSPTEIRIRDCSWLSEEDFTK 346
           TSL+ +PD LRHKLS +LCD RRMNSH LELLV GSP E+ +RDCSWL+EE+F +
Sbjct: 526 TSLESIPDALRHKLSQLLCDSRRMNSHILELLVSGSPFEVCVRDCSWLTEEEFAR 580


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