BLASTX nr result
ID: Cnidium21_contig00003136
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00003136
(743 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520064.1| U3 small nucleolar RNA-associated protein, p... 400 e-109
emb|CBI26489.3| unnamed protein product [Vitis vinifera] 399 e-109
ref|XP_002272675.1| PREDICTED: transducin beta-like protein 3-li... 399 e-109
ref|XP_002319254.1| predicted protein [Populus trichocarpa] gi|2... 399 e-109
ref|XP_002325374.1| predicted protein [Populus trichocarpa] gi|2... 394 e-107
>ref|XP_002520064.1| U3 small nucleolar RNA-associated protein, putative [Ricinus
communis] gi|223540828|gb|EEF42388.1| U3 small nucleolar
RNA-associated protein, putative [Ricinus communis]
Length = 876
Score = 400 bits (1028), Expect = e-109
Identities = 194/249 (77%), Positives = 216/249 (86%), Gaps = 2/249 (0%)
Frame = -1
Query: 743 VLSLDTCVSTSGRTLIVTGSKDNTVRLWETDSRGCIXXXXXXXXXXXXXAFSKKSRNFFV 564
VL LDTCVS SGR LIVTGSKD+TVRLW+++SR C+ AFSKK +NFFV
Sbjct: 395 VLCLDTCVSRSGRALIVTGSKDHTVRLWDSESRNCVGVGTGHMGGVGAVAFSKKLKNFFV 454
Query: 563 SGSTDCTLKVWSFDGLLNEGDS--NLKVKAAAASHDKDINAIAIAPNDSLVCSGSQDRTA 390
SGS+D T+KVWS DG+ + D NLK KA A+HDKDIN++AIAPNDSLVCSGSQDRTA
Sbjct: 455 SGSSDRTIKVWSLDGISEDADQFVNLKAKAVVAAHDKDINSLAIAPNDSLVCSGSQDRTA 514
Query: 389 CIRRLPDLVSVTVLRGHKRGIWSVEFSPVDQCVITASGDKTVKIWAISDGSCLKTFEGHT 210
C+ RLPDLVSV VL+GHKRGIWSVEFSPVDQCVITASGDKT+KIWAI+DGSCLKTFEGHT
Sbjct: 515 CVWRLPDLVSVVVLKGHKRGIWSVEFSPVDQCVITASGDKTIKIWAIADGSCLKTFEGHT 574
Query: 209 SSVLRAFFVTRGSQFVSCGADGLVKLWTVKTNECIATYDQHEDKIWALAVGKKTEMLATG 30
SSVLRA F+TRG+QFVSCGADGLVKLWTVKTNECIATYDQHEDK+WALAVGK+TEM ATG
Sbjct: 575 SSVLRASFLTRGTQFVSCGADGLVKLWTVKTNECIATYDQHEDKVWALAVGKQTEMFATG 634
Query: 29 GGDAVVNLW 3
GGDA+VNLW
Sbjct: 635 GGDALVNLW 643
Score = 75.9 bits (185), Expect = 8e-12
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Frame = -1
Query: 500 SNLKVKAAAASHDKDINAIAIAPNDSLVCSGSQDRTACIRRLPDLVSVTVLRGHKRGIWS 321
+N V+A + A+ ++P+D L+ S R + L + V +GH+ +
Sbjct: 43 ANGAVRATIEGDTEAATALTLSPDDKLMFSAGHSRQIRVWDLSTMKCVRSWKGHEGPVMG 102
Query: 320 VEFSPVDQCVITASGDKTVKIWAISDGSCLKTFEGHTSSVLRAFFVTRGSQFV--SCGAD 147
+ + TA D+ V +W + G C F+GH V F ++ + S D
Sbjct: 103 MACHASGGLLATAGADRKVLVWDVDGGFCTHFFKGHKGVVSSVMFHPDANKMLLFSGSDD 162
Query: 146 GLVKLWTVKTNECIATYDQHEDKIWALAVGKKTEMLATGGGDAVVNLW 3
V++W + + +CIAT ++H + +L V + L + G D VVNLW
Sbjct: 163 ATVRVWNLASKKCIATLERHFTTVTSLEVSEDGWTLLSAGRDKVVNLW 210
>emb|CBI26489.3| unnamed protein product [Vitis vinifera]
Length = 876
Score = 399 bits (1024), Expect = e-109
Identities = 194/249 (77%), Positives = 217/249 (87%), Gaps = 2/249 (0%)
Frame = -1
Query: 743 VLSLDTCVSTSGRTLIVTGSKDNTVRLWETDSRGCIXXXXXXXXXXXXXAFSKKSRNFFV 564
VL LDTCVS+SGRT +VTGSKDN+VRLWE++SR CI AFSKK RNFFV
Sbjct: 390 VLCLDTCVSSSGRTFVVTGSKDNSVRLWESESRCCIGVGTGHTGAVGAVAFSKKLRNFFV 449
Query: 563 SGSTDCTLKVWSFDGLLNEGDS--NLKVKAAAASHDKDINAIAIAPNDSLVCSGSQDRTA 390
SGS+D TLKVWS DGL ++ + +LK KA A+HDKDIN++A+APNDSLVCSGSQDRTA
Sbjct: 450 SGSSDRTLKVWSLDGLSDDTEQPISLKAKAVVAAHDKDINSLAVAPNDSLVCSGSQDRTA 509
Query: 389 CIRRLPDLVSVTVLRGHKRGIWSVEFSPVDQCVITASGDKTVKIWAISDGSCLKTFEGHT 210
C+ RLPDLVSV VL+GHKRG+WSVEFSPVDQCV+TASGDKT+KIWAISDGSCLKTFEGHT
Sbjct: 510 CVWRLPDLVSVVVLKGHKRGVWSVEFSPVDQCVMTASGDKTIKIWAISDGSCLKTFEGHT 569
Query: 209 SSVLRAFFVTRGSQFVSCGADGLVKLWTVKTNECIATYDQHEDKIWALAVGKKTEMLATG 30
SSVLRA F+TRG+Q VSCGADGLVKLWT+KTNECIATYDQHEDK+WALAVGKKTEMLATG
Sbjct: 570 SSVLRASFLTRGTQVVSCGADGLVKLWTIKTNECIATYDQHEDKVWALAVGKKTEMLATG 629
Query: 29 GGDAVVNLW 3
G DAVVNLW
Sbjct: 630 GSDAVVNLW 638
Score = 75.1 bits (183), Expect = 1e-11
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 2/162 (1%)
Frame = -1
Query: 500 SNLKVKAAAASHDKDINAIAIAPNDSLVCSGSQDRTACIRRLPDLVSVTVLRGHKRGIWS 321
SN +++ + + A+A++P+D L+ S S R + L L + +GH+ +
Sbjct: 48 SNASIRSVVEGDSQTVTALALSPDDRLLFSSSHSRQIRVWELSSLKCIRSWKGHEGPVMG 107
Query: 320 VEFSPVDQCVITASGDKTVKIWAISDGSCLKTFEGHTSSVLRAFFVTRGSQ--FVSCGAD 147
+ + TA D+ V +W + G C F+GH V F ++ VS D
Sbjct: 108 MACDASGGVLATAGADRKVLVWDVDGGYCTHYFKGHKGVVTSIIFHPDVNRLLLVSGSDD 167
Query: 146 GLVKLWTVKTNECIATYDQHEDKIWALAVGKKTEMLATGGGD 21
V++W + + +C+AT ++H + +LAV + L + G D
Sbjct: 168 ATVRVWDLMSKKCVATLERHFSAVTSLAVSEDGWTLLSAGRD 209
>ref|XP_002272675.1| PREDICTED: transducin beta-like protein 3-like [Vitis vinifera]
Length = 887
Score = 399 bits (1024), Expect = e-109
Identities = 194/249 (77%), Positives = 217/249 (87%), Gaps = 2/249 (0%)
Frame = -1
Query: 743 VLSLDTCVSTSGRTLIVTGSKDNTVRLWETDSRGCIXXXXXXXXXXXXXAFSKKSRNFFV 564
VL LDTCVS+SGRT +VTGSKDN+VRLWE++SR CI AFSKK RNFFV
Sbjct: 401 VLCLDTCVSSSGRTFVVTGSKDNSVRLWESESRCCIGVGTGHTGAVGAVAFSKKLRNFFV 460
Query: 563 SGSTDCTLKVWSFDGLLNEGDS--NLKVKAAAASHDKDINAIAIAPNDSLVCSGSQDRTA 390
SGS+D TLKVWS DGL ++ + +LK KA A+HDKDIN++A+APNDSLVCSGSQDRTA
Sbjct: 461 SGSSDRTLKVWSLDGLSDDTEQPISLKAKAVVAAHDKDINSLAVAPNDSLVCSGSQDRTA 520
Query: 389 CIRRLPDLVSVTVLRGHKRGIWSVEFSPVDQCVITASGDKTVKIWAISDGSCLKTFEGHT 210
C+ RLPDLVSV VL+GHKRG+WSVEFSPVDQCV+TASGDKT+KIWAISDGSCLKTFEGHT
Sbjct: 521 CVWRLPDLVSVVVLKGHKRGVWSVEFSPVDQCVMTASGDKTIKIWAISDGSCLKTFEGHT 580
Query: 209 SSVLRAFFVTRGSQFVSCGADGLVKLWTVKTNECIATYDQHEDKIWALAVGKKTEMLATG 30
SSVLRA F+TRG+Q VSCGADGLVKLWT+KTNECIATYDQHEDK+WALAVGKKTEMLATG
Sbjct: 581 SSVLRASFLTRGTQVVSCGADGLVKLWTIKTNECIATYDQHEDKVWALAVGKKTEMLATG 640
Query: 29 GGDAVVNLW 3
G DAVVNLW
Sbjct: 641 GSDAVVNLW 649
Score = 85.9 bits (211), Expect = 8e-15
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 2/168 (1%)
Frame = -1
Query: 500 SNLKVKAAAASHDKDINAIAIAPNDSLVCSGSQDRTACIRRLPDLVSVTVLRGHKRGIWS 321
SN +++ + + A+A++P+D L+ S S R + L L + +GH+ +
Sbjct: 48 SNASIRSVVEGDSQTVTALALSPDDRLLFSSSHSRQIRVWELSSLKCIRSWKGHEGPVMG 107
Query: 320 VEFSPVDQCVITASGDKTVKIWAISDGSCLKTFEGHTSSVLRAFFVTRGSQ--FVSCGAD 147
+ + TA D+ V +W + G C F+GH V F ++ VS D
Sbjct: 108 MACDASGGVLATAGADRKVLVWDVDGGYCTHYFKGHKGVVTSIIFHPDVNRLLLVSGSDD 167
Query: 146 GLVKLWTVKTNECIATYDQHEDKIWALAVGKKTEMLATGGGDAVVNLW 3
V++W + + +C+AT ++H + +LAV + L + G D VVNLW
Sbjct: 168 ATVRVWDLMSKKCVATLERHFSAVTSLAVSEDGWTLLSAGRDKVVNLW 215
>ref|XP_002319254.1| predicted protein [Populus trichocarpa] gi|222857630|gb|EEE95177.1|
predicted protein [Populus trichocarpa]
Length = 913
Score = 399 bits (1024), Expect = e-109
Identities = 193/249 (77%), Positives = 215/249 (86%), Gaps = 2/249 (0%)
Frame = -1
Query: 743 VLSLDTCVSTSGRTLIVTGSKDNTVRLWETDSRGCIXXXXXXXXXXXXXAFSKKSRNFFV 564
VL LDTCVS+SGR L+ TGSKDN+VRLW ++SR CI AFSKK +NFFV
Sbjct: 446 VLCLDTCVSSSGRPLLATGSKDNSVRLWNSESRNCIGVGTGHMGGVGAVAFSKKWKNFFV 505
Query: 563 SGSTDCTLKVWSFDGLLNEGDS--NLKVKAAAASHDKDINAIAIAPNDSLVCSGSQDRTA 390
SGS+D T+KVWS DG+ ++ D NLK KA A+HDKDIN++AIAPNDSLVCSGSQDRTA
Sbjct: 506 SGSSDRTIKVWSLDGISDDADQPINLKAKAVVAAHDKDINSLAIAPNDSLVCSGSQDRTA 565
Query: 389 CIRRLPDLVSVTVLRGHKRGIWSVEFSPVDQCVITASGDKTVKIWAISDGSCLKTFEGHT 210
C+ RLPDLVSV VL+GHKRGIWSVEFSPVDQCVITASGDKT+K+WAI+DGSCLKTFEGHT
Sbjct: 566 CVWRLPDLVSVVVLKGHKRGIWSVEFSPVDQCVITASGDKTIKMWAIADGSCLKTFEGHT 625
Query: 209 SSVLRAFFVTRGSQFVSCGADGLVKLWTVKTNECIATYDQHEDKIWALAVGKKTEMLATG 30
SSVLRA F+TRGSQFVSCGADGLVKLWTVKTNEC ATYDQHEDK+WALA+GKKTEM ATG
Sbjct: 626 SSVLRASFLTRGSQFVSCGADGLVKLWTVKTNECTATYDQHEDKVWALAIGKKTEMFATG 685
Query: 29 GGDAVVNLW 3
GGDAVVNLW
Sbjct: 686 GGDAVVNLW 694
Score = 72.8 bits (177), Expect = 7e-11
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 3/167 (1%)
Frame = -1
Query: 500 SNLKVKAAA-ASHDKDINAIAIAPNDSLVCSGSQDRTACIRRLPDLVSVTVLRGHKRGIW 324
SN +KA+ D + A+A+ PND + S R + L + +GH +
Sbjct: 48 SNASIKASIEVDTDSGLTALALDPNDRFLFSAGHSRLIRVWDLSTFKCIRSWKGHDGPVM 107
Query: 323 SVEFSPVDQCVITASGDKTVKIWAISDGSCLKTFEGHTSSVLRAFF--VTRGSQFVSCGA 150
S+ + TA D+ V +W + G C F+GH V F T + S A
Sbjct: 108 SMACHASGGLLATAGADRKVLVWDVDGGFCTHYFKGHKDVVTSIMFHPDTNKTLLFSGSA 167
Query: 149 DGLVKLWTVKTNECIATYDQHEDKIWALAVGKKTEMLATGGGDAVVN 9
D V++W + +CIAT ++H + ++AV + L T G D ++
Sbjct: 168 DATVRVWDLLAKKCIATLERHFSALTSMAVSEDGWTLLTAGRDKTLD 214
Score = 57.4 bits (137), Expect = 3e-06
Identities = 30/149 (20%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Frame = -1
Query: 443 AIAPNDSLVCSGSQDRTACIRRLPDLVSVTVLRGHKRGIWSVEFSPVDQCVITASGDKTV 264
A++ + S + + D + + ++ G+ ++ P D+ + +A + +
Sbjct: 26 AVSSDGSFIACANGDAIKILDSSNASIKASIEVDTDSGLTALALDPNDRFLFSAGHSRLI 85
Query: 263 KIWAISDGSCLKTFEGHTSSVLRAFFVTRGSQFVSCGADGLVKLWTVKTNECIATYDQHE 84
++W +S C+++++GH V+ G + GAD V +W V C + H+
Sbjct: 86 RVWDLSTFKCIRSWKGHDGPVMSMACHASGGLLATAGADRKVLVWDVDGGFCTHYFKGHK 145
Query: 83 DKIWALAVGKKTE--MLATGGGDAVVNLW 3
D + ++ T +L +G DA V +W
Sbjct: 146 DVVTSIMFHPDTNKTLLFSGSADATVRVW 174
>ref|XP_002325374.1| predicted protein [Populus trichocarpa] gi|222862249|gb|EEE99755.1|
predicted protein [Populus trichocarpa]
Length = 853
Score = 394 bits (1011), Expect = e-107
Identities = 190/249 (76%), Positives = 216/249 (86%), Gaps = 2/249 (0%)
Frame = -1
Query: 743 VLSLDTCVSTSGRTLIVTGSKDNTVRLWETDSRGCIXXXXXXXXXXXXXAFSKKSRNFFV 564
VL LDTCVS+SGR L+VTGSKDN+VRLW ++S CI AFSKK +NFFV
Sbjct: 378 VLCLDTCVSSSGRPLLVTGSKDNSVRLWNSESINCIGVGMGHMGGVGAVAFSKKWKNFFV 437
Query: 563 SGSTDCTLKVWSFDGLLNEGDS--NLKVKAAAASHDKDINAIAIAPNDSLVCSGSQDRTA 390
SGS+D T+KVWS DG+ ++ D NLK KA A+HDKDIN++AIAPND+LVCSGSQDRTA
Sbjct: 438 SGSSDRTIKVWSIDGISDDADQPINLKAKAVVAAHDKDINSLAIAPNDTLVCSGSQDRTA 497
Query: 389 CIRRLPDLVSVTVLRGHKRGIWSVEFSPVDQCVITASGDKTVKIWAISDGSCLKTFEGHT 210
C+ RLPDLVSV VL+GHKRGIWSVEFSPVDQCVITASGDKT+K+WAI++GSCLKTFEGHT
Sbjct: 498 CVWRLPDLVSVVVLKGHKRGIWSVEFSPVDQCVITASGDKTIKMWAIANGSCLKTFEGHT 557
Query: 209 SSVLRAFFVTRGSQFVSCGADGLVKLWTVKTNECIATYDQHEDKIWALAVGKKTEMLATG 30
SSVLRA F+TRG+QFVSCGADGLVKLWTVKTNECIATYDQHEDK+WALA+G+KTEM ATG
Sbjct: 558 SSVLRASFLTRGTQFVSCGADGLVKLWTVKTNECIATYDQHEDKVWALAIGRKTEMFATG 617
Query: 29 GGDAVVNLW 3
GGDAVVNLW
Sbjct: 618 GGDAVVNLW 626
Score = 74.7 bits (182), Expect = 2e-11
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
Frame = -1
Query: 497 NLKVKAAA-ASHDKDINAIAIAPNDSLVCSGSQDRTACIRRLPDLVSVTVLRGHKRGIWS 321
N +KA+ D + A+A++P+D + S R + R+ DL T GH + +
Sbjct: 38 NASIKASIEVDTDAGVTALALSPDDKFLFSAGHSR---LIRVWDLS--TFKCGHDGPVMA 92
Query: 320 VEFSPVDQCVITASGDKTVKIWAISDGSCLKTFEGHTSSVLRAFFV--TRGSQFVSCGAD 147
+ + TA D+ V +W + G C F+GH V F T + S AD
Sbjct: 93 MACHASGGLLATAGADRKVLVWDVDGGFCTHYFKGHKDVVTTLMFHPDTNKTLLFSGSAD 152
Query: 146 GLVKLWTVKTNECIATYDQHEDKIWALAVGKKTEMLATGGGDAVVNLW 3
V++W + +C AT ++H + ++AV + L T G D VVNLW
Sbjct: 153 ATVRVWDLLAKKCFATLERHFSSLTSMAVSEDGWTLLTAGRDKVVNLW 200