BLASTX nr result

ID: Cnidium21_contig00003127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003127
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526509.1| nucleolar GTP-binding protein, putative [Ric...   113   1e-23
ref|XP_003532225.1| PREDICTED: nucleolar GTP-binding protein 1-l...   111   7e-23
ref|XP_002302481.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_002265256.2| PREDICTED: nucleolar GTP-binding protein 1-l...   108   3e-22
emb|CBI39064.3| unnamed protein product [Vitis vinifera]              108   3e-22

>ref|XP_002526509.1| nucleolar GTP-binding protein, putative [Ricinus communis]
           gi|223534184|gb|EEF35900.1| nucleolar GTP-binding
           protein, putative [Ricinus communis]
          Length = 443

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/107 (55%), Positives = 81/107 (75%)
 Frame = +2

Query: 179 LDLIEKELAVSLRTYKENFPRKQHLHPYERSLIDLTLGDGNYEEVLKKVEALRKKVVSVG 358
           LD + KELA+ LR Y ENFP++++LHPYE+SLI+LTLGDGNYEEVL+KV+ALRKKVVS+G
Sbjct: 131 LDALMKELALPLREYLENFPKRKYLHPYEQSLIELTLGDGNYEEVLRKVDALRKKVVSIG 190

Query: 359 KEHASLCAQ*LVISSLLLKLAPCVSNCFSDRTLKLLKLEHRALDQVV 499
           KEHAS+CA+     SL  + A    N   ++  ++ K E +A+D ++
Sbjct: 191 KEHASVCAK-----SLTKREAEEQLNEGREKLEEIFKCEGKAVDDLL 232


>ref|XP_003532225.1| PREDICTED: nucleolar GTP-binding protein 1-like [Glycine max]
          Length = 435

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/69 (76%), Positives = 61/69 (88%)
 Frame = +2

Query: 179 LDLIEKELAVSLRTYKENFPRKQHLHPYERSLIDLTLGDGNYEEVLKKVEALRKKVVSVG 358
           LD + KE+AV LRTY ENFP K HLHPYERSLI+LTLGDG YE VL+KV++LRK+VVSVG
Sbjct: 124 LDALMKEIAVPLRTYVENFPNKMHLHPYERSLIELTLGDGYYEMVLRKVDSLRKRVVSVG 183

Query: 359 KEHASLCAQ 385
           KEHASLCA+
Sbjct: 184 KEHASLCAK 192


>ref|XP_002302481.1| predicted protein [Populus trichocarpa] gi|222844207|gb|EEE81754.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/69 (78%), Positives = 62/69 (89%)
 Frame = +2

Query: 179 LDLIEKELAVSLRTYKENFPRKQHLHPYERSLIDLTLGDGNYEEVLKKVEALRKKVVSVG 358
           LD + KELAV LR Y ENFP+K++LHPYERSLI+LTLGDGNYEEVL+KV+ALRKKVV VG
Sbjct: 40  LDALMKELAVPLREYMENFPKKKYLHPYERSLIELTLGDGNYEEVLRKVDALRKKVVGVG 99

Query: 359 KEHASLCAQ 385
           KE ASLCA+
Sbjct: 100 KECASLCAK 108


>ref|XP_002265256.2| PREDICTED: nucleolar GTP-binding protein 1-like [Vitis vinifera]
          Length = 445

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/69 (75%), Positives = 61/69 (88%)
 Frame = +2

Query: 179 LDLIEKELAVSLRTYKENFPRKQHLHPYERSLIDLTLGDGNYEEVLKKVEALRKKVVSVG 358
           LD + KELAV LR Y ENFP K+ LHPYE+SLI LTLGDGNYE+VL++V++LRKKVVSVG
Sbjct: 129 LDFLMKELAVPLRGYAENFPDKKQLHPYEQSLIQLTLGDGNYEQVLRRVDSLRKKVVSVG 188

Query: 359 KEHASLCAQ 385
           KEHASLCA+
Sbjct: 189 KEHASLCAK 197


>emb|CBI39064.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/69 (75%), Positives = 61/69 (88%)
 Frame = +2

Query: 179 LDLIEKELAVSLRTYKENFPRKQHLHPYERSLIDLTLGDGNYEEVLKKVEALRKKVVSVG 358
           LD + KELAV LR Y ENFP K+ LHPYE+SLI LTLGDGNYE+VL++V++LRKKVVSVG
Sbjct: 129 LDFLMKELAVPLRGYAENFPDKKQLHPYEQSLIQLTLGDGNYEQVLRRVDSLRKKVVSVG 188

Query: 359 KEHASLCAQ 385
           KEHASLCA+
Sbjct: 189 KEHASLCAK 197


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