BLASTX nr result

ID: Cnidium21_contig00003120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003120
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531849.1| lipoate-protein ligase, putative [Ricinus co...   192   3e-47
ref|XP_002281967.1| PREDICTED: probable lipoate-protein ligase A...   185   4e-45
ref|XP_002323867.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45
ref|XP_004137412.1| PREDICTED: putative lipoate-protein ligase A...   171   6e-41
ref|XP_002875485.1| predicted protein [Arabidopsis lyrata subsp....   171   7e-41

>ref|XP_002531849.1| lipoate-protein ligase, putative [Ricinus communis]
           gi|223528499|gb|EEF30527.1| lipoate-protein ligase,
           putative [Ricinus communis]
          Length = 267

 Score =  192 bits (487), Expect = 3e-47
 Identities = 88/111 (79%), Positives = 99/111 (89%)
 Frame = -1

Query: 334 RTSPHNWCIINDGTNFPSIVMGISGKPAELVEINSVLRDKVPVIRRFSGGGTVIVDSGTI 155
           RTS  NWCIINDGTN P+IVMGISGKP+EL+EI  VLRD +PVIRRF+GGGTVIVDSGT+
Sbjct: 37  RTSSDNWCIINDGTNVPNIVMGISGKPSELLEIEPVLRDHIPVIRRFTGGGTVIVDSGTV 96

Query: 154 FVTFICNKDDVPAVQPYPRPIMSWSSLLYSKVFQGVGDFVLRENDYAFGNR 2
           FVT ICNKDDVP VQPYPR IMSWS LLY++VFQG+GDF LRENDY FG++
Sbjct: 97  FVTLICNKDDVPGVQPYPRSIMSWSGLLYNEVFQGIGDFQLRENDYVFGDK 147


>ref|XP_002281967.1| PREDICTED: probable lipoate-protein ligase A [Vitis vinifera]
           gi|297733965|emb|CBI15212.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  185 bits (469), Expect = 4e-45
 Identities = 83/110 (75%), Positives = 99/110 (90%)
 Frame = -1

Query: 334 RTSPHNWCIINDGTNFPSIVMGISGKPAELVEINSVLRDKVPVIRRFSGGGTVIVDSGTI 155
           RTS  NWCIINDG N P+IVMGISGKPA+L++++SVL D++PVIRR++GGGTV+VD GT+
Sbjct: 36  RTSSENWCIINDGANDPTIVMGISGKPAQLLKLDSVLNDRIPVIRRYTGGGTVVVDCGTV 95

Query: 154 FVTFICNKDDVPAVQPYPRPIMSWSSLLYSKVFQGVGDFVLRENDYAFGN 5
           FVTFICNKD VP +QPYP+PIMSWSSLLY+ VF+G GDF LRENDYAFGN
Sbjct: 96  FVTFICNKDAVPGLQPYPQPIMSWSSLLYALVFRGFGDFSLRENDYAFGN 145


>ref|XP_002323867.1| predicted protein [Populus trichocarpa] gi|222866869|gb|EEF04000.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  184 bits (466), Expect = 8e-45
 Identities = 85/111 (76%), Positives = 96/111 (86%)
 Frame = -1

Query: 334 RTSPHNWCIINDGTNFPSIVMGISGKPAELVEINSVLRDKVPVIRRFSGGGTVIVDSGTI 155
           RTS  NWCI+NDGTN PSIVMG+SGK +EL+E+  VLRD+VPVIRRF+GGGTVIVD GTI
Sbjct: 37  RTSSDNWCIVNDGTNTPSIVMGLSGKASELLELGFVLRDEVPVIRRFTGGGTVIVDHGTI 96

Query: 154 FVTFICNKDDVPAVQPYPRPIMSWSSLLYSKVFQGVGDFVLRENDYAFGNR 2
           FVT ICNKDDVP VQPYPR IMSWS LLY +V +G+GDF LRENDY FG+R
Sbjct: 97  FVTLICNKDDVPGVQPYPRSIMSWSGLLYGQVLRGIGDFQLRENDYVFGDR 147


>ref|XP_004137412.1| PREDICTED: putative lipoate-protein ligase A-like [Cucumis sativus]
           gi|449518213|ref|XP_004166137.1| PREDICTED: putative
           lipoate-protein ligase A-like [Cucumis sativus]
          Length = 271

 Score =  171 bits (433), Expect = 6e-41
 Identities = 80/111 (72%), Positives = 95/111 (85%)
 Frame = -1

Query: 334 RTSPHNWCIINDGTNFPSIVMGISGKPAELVEINSVLRDKVPVIRRFSGGGTVIVDSGTI 155
           R S  NWCIINDGT+ P+IVMG+SGKP EL++I SVL D++PVIRRF+GGGTVIVD  T+
Sbjct: 36  RNSSDNWCIINDGTDNPAIVMGVSGKPDELLDIKSVLGDQIPVIRRFTGGGTVIVDHNTV 95

Query: 154 FVTFICNKDDVPAVQPYPRPIMSWSSLLYSKVFQGVGDFVLRENDYAFGNR 2
           FVTFICNKD V  ++P+P+PIMSWSSL+Y+KVFQG  DF LRENDY FGNR
Sbjct: 96  FVTFICNKDAVSGLKPFPQPIMSWSSLVYNKVFQGT-DFYLRENDYVFGNR 145


>ref|XP_002875485.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321323|gb|EFH51744.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score =  171 bits (432), Expect = 7e-41
 Identities = 74/111 (66%), Positives = 92/111 (82%)
 Frame = -1

Query: 334 RTSPHNWCIINDGTNFPSIVMGISGKPAELVEINSVLRDKVPVIRRFSGGGTVIVDSGTI 155
           RTS  NWCI+NDGTN P+IVMG+SGKP +L+E+  V+ D++PVI+RF+GGGTVIVD  T+
Sbjct: 36  RTSSDNWCIVNDGTNVPTIVMGMSGKPCQLIEVRPVMEDRIPVIKRFTGGGTVIVDKSTL 95

Query: 154 FVTFICNKDDVPAVQPYPRPIMSWSSLLYSKVFQGVGDFVLRENDYAFGNR 2
           FV+ ICNKDDVP VQPYPR +M+WS  LY +VF+GV  F LRENDY FG+R
Sbjct: 96  FVSLICNKDDVPNVQPYPRSVMAWSGSLYGEVFKGVNGFQLRENDYVFGDR 146


Top