BLASTX nr result

ID: Cnidium21_contig00003119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003119
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216...   167   4e-39
ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262...   160   4e-37
ref|XP_002516840.1| serine/arginine rich splicing factor, putati...   157   4e-36
gb|ACU20250.1| unknown [Glycine max]                                  157   6e-36
ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [M...   155   2e-35

>ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
           gi|449495419|ref|XP_004159835.1| PREDICTED:
           uncharacterized LOC101216537 [Cucumis sativus]
          Length = 248

 Score =  167 bits (423), Expect = 4e-39
 Identities = 80/92 (86%), Positives = 87/92 (94%)
 Frame = +1

Query: 142 SPGPTGLLVRNISLTARVEDLRVPFERFGPVKDVYLPKNYYTGEARGFGFVKFRFADDAA 321
           SP P+GLLVRN+ L AR EDLR+PFERFGPVKDVYLPKNYYTGE RGFGFVKFRFA+DAA
Sbjct: 46  SPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAA 105

Query: 322 EAKKRLNNTVIGGREIRIVFAEENRKTPQEMR 417
           EAK++LN+TVIGGREIRIVFAEENRKTPQEMR
Sbjct: 106 EAKQQLNHTVIGGREIRIVFAEENRKTPQEMR 137


>ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
           gi|298205010|emb|CBI34317.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  160 bits (406), Expect = 4e-37
 Identities = 79/92 (85%), Positives = 84/92 (91%)
 Frame = +1

Query: 142 SPGPTGLLVRNISLTARVEDLRVPFERFGPVKDVYLPKNYYTGEARGFGFVKFRFADDAA 321
           SP P+GLLVRNI+L AR EDLRVPFERFGPVKDVYLPKNYYTGE RGFGFVKFR A+DAA
Sbjct: 40  SPAPSGLLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAA 99

Query: 322 EAKKRLNNTVIGGREIRIVFAEENRKTPQEMR 417
           EAK  LN++VIGGREI IVFAEENRKTPQEMR
Sbjct: 100 EAKHHLNHSVIGGREIAIVFAEENRKTPQEMR 131


>ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223543928|gb|EEF45454.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 257

 Score =  157 bits (397), Expect = 4e-36
 Identities = 73/92 (79%), Positives = 85/92 (92%)
 Frame = +1

Query: 142 SPGPTGLLVRNISLTARVEDLRVPFERFGPVKDVYLPKNYYTGEARGFGFVKFRFADDAA 321
           SP P+GLLVRN+ L AR EDLR PFE++GPVKDVYLPKNYYTGE RGFGFVK+R+A+DAA
Sbjct: 48  SPAPSGLLVRNLPLDARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAA 107

Query: 322 EAKKRLNNTVIGGREIRIVFAEENRKTPQEMR 417
           EAK+R+N+ +IGGREIRIV+AEENRKTPQEMR
Sbjct: 108 EAKQRMNHKIIGGREIRIVYAEENRKTPQEMR 139


>gb|ACU20250.1| unknown [Glycine max]
          Length = 270

 Score =  157 bits (396), Expect = 6e-36
 Identities = 74/92 (80%), Positives = 84/92 (91%)
 Frame = +1

Query: 142 SPGPTGLLVRNISLTARVEDLRVPFERFGPVKDVYLPKNYYTGEARGFGFVKFRFADDAA 321
           SP P+GLLVRN+ L AR EDLR+PFER+GPVKDVYLPKNYYTGE RGFGFVK+R+ +DAA
Sbjct: 45  SPLPSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAA 104

Query: 322 EAKKRLNNTVIGGREIRIVFAEENRKTPQEMR 417
           EAK+ LN+T+IGGREIRIVFAEENRKT QEMR
Sbjct: 105 EAKQHLNHTIIGGREIRIVFAEENRKTSQEMR 136


>ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
           gi|355510621|gb|AES91763.1| Splicing factor,
           arginine/serine-rich 13A [Medicago truncatula]
          Length = 192

 Score =  155 bits (392), Expect = 2e-35
 Identities = 74/92 (80%), Positives = 84/92 (91%)
 Frame = +1

Query: 142 SPGPTGLLVRNISLTARVEDLRVPFERFGPVKDVYLPKNYYTGEARGFGFVKFRFADDAA 321
           SP P+GLLVRN+ L AR EDLR PFER+GPVKDVYLP+NYYTGE RGFGFVK+R  +DAA
Sbjct: 44  SPLPSGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAA 103

Query: 322 EAKKRLNNTVIGGREIRIVFAEENRKTPQEMR 417
           EAK++LN+T+IGGREIRIVFAEENRKTPQEMR
Sbjct: 104 EAKQQLNHTIIGGREIRIVFAEENRKTPQEMR 135


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