BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003109
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB28472.1| polyprotein [Ananas comosus]                           262   5e-68
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   253   2e-65
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   253   2e-65
gb|ABA95357.2| retrotransposon protein, putative, unclassified [...   248   5e-64
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   247   1e-63

>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  262 bits (669), Expect = 5e-68
 Identities = 120/216 (55%), Positives = 157/216 (72%)
 Frame = -3

Query: 650  VIGNQGSLRKQVFTELHSNGIGGHSGIKATIRRVGEYFFWTTLKQDIGRWVRECGVCQAV 471
            V+G+   L+ Q+    H++ IGGHSG++AT R++   F+W  L++D+ ++VREC VCQ  
Sbjct: 697  VVGSDPGLKLQLIHNFHASSIGGHSGMEATTRKLKGQFYWKGLRRDVEQFVRECSVCQQN 756

Query: 470  KGEHVKKPGLLQPLAVPQEPWRDIAMDFITGLPKSMGFEVIWVVMDRFSRYAHFVALQHP 291
            K E     GLLQPL +P+  W +I+MDFI GLP S G EVI VV+DR S+YAHF+AL HP
Sbjct: 757  KYETTAPAGLLQPLPIPEGIWTEISMDFIEGLPNSQGKEVIMVVVDRLSKYAHFIALSHP 816

Query: 290  LSAKTLAQTFFDHIYKLHGLPESIVSDRDSLFLSEFWQNLFKISGTRLCMSTAYHP*SDG 111
             +A ++AQ F D+IYKLHG+P SIVSDRD++F+S+FWQ LFK    ++ +STAYHP SDG
Sbjct: 817  YTASSVAQLFLDNIYKLHGMPRSIVSDRDTIFVSQFWQELFKRLQVKVNLSTAYHPQSDG 876

Query: 110  CTERVNQCLEQYLRSMTSQVPKNWANWLSAAEWWYN 3
             TE VN+CLE YLR M  + PK WA WL  AEWWYN
Sbjct: 877  QTEVVNRCLENYLRCMAGERPKEWAKWLPLAEWWYN 912


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  253 bits (646), Expect = 2e-65
 Identities = 114/215 (53%), Positives = 150/215 (69%)
 Frame = -3

Query: 647  IGNQGSLRKQVFTELHSNGIGGHSGIKATIRRVGEYFFWTTLKQDIGRWVRECGVCQAVK 468
            +G  G +R Q+    HS+  GGH GI+AT +R+ + F+W  LK+ +   +R C VCQ  K
Sbjct: 528  VGETGEIRGQLIQAYHSSTFGGHCGIRATYQRIKKLFYWPGLKKGVENHIRNCPVCQVTK 587

Query: 467  GEHVKKPGLLQPLAVPQEPWRDIAMDFITGLPKSMGFEVIWVVMDRFSRYAHFVALQHPL 288
             EHV  PGLL PL VP   W  I+MDF+ GLPKS G +VI VV+DR ++YAHF+AL HP 
Sbjct: 588  SEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKSKGKDVILVVVDRLTKYAHFIALSHPY 647

Query: 287  SAKTLAQTFFDHIYKLHGLPESIVSDRDSLFLSEFWQNLFKISGTRLCMSTAYHP*SDGC 108
            + + + Q F D+I+KLHG+P +IV+DRD +F S F+Q +FK    +L  STAYHP +DG 
Sbjct: 648  TVEEVVQVFMDNIHKLHGMPIAIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQ 707

Query: 107  TERVNQCLEQYLRSMTSQVPKNWANWLSAAEWWYN 3
            TERVNQCLE YLR MT Q P+NW +W++ AEWWYN
Sbjct: 708  TERVNQCLESYLRCMTFQEPQNWCSWIALAEWWYN 742


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  253 bits (646), Expect = 2e-65
 Identities = 118/215 (54%), Positives = 145/215 (67%)
 Frame = -3

Query: 647  IGNQGSLRKQVFTELHSNGIGGHSGIKATIRRVGEYFFWTTLKQDIGRWVRECGVCQAVK 468
            +G    LR  +   LH + +GGHSG  AT +RV   F+W  +K++I   VREC VCQ  K
Sbjct: 909  VGKDPELRLNIIHSLHMSAVGGHSGRVATYQRVKHLFYWPGMKKEIHTMVRECAVCQRSK 968

Query: 467  GEHVKKPGLLQPLAVPQEPWRDIAMDFITGLPKSMGFEVIWVVMDRFSRYAHFVALQHPL 288
             EH   PGLL+PL +P   W  I+MDFI GLP S G EVI+VV+DRF++YAH V L HP 
Sbjct: 969  AEHCHYPGLLEPLPIPDMAWTHISMDFIEGLPSSKGKEVIFVVVDRFTKYAHSVPLSHPY 1028

Query: 287  SAKTLAQTFFDHIYKLHGLPESIVSDRDSLFLSEFWQNLFKISGTRLCMSTAYHP*SDGC 108
            S + +AQ F D+I+KLHG P +IVSDRD +F S+ WQ LFK    +L  STAYHP +DG 
Sbjct: 1029 SVQLVAQAFIDNIFKLHGFPIAIVSDRDRIFTSKLWQELFKSMKVQLRFSTAYHPQTDGQ 1088

Query: 107  TERVNQCLEQYLRSMTSQVPKNWANWLSAAEWWYN 3
            TERVNQC+E YLR M  Q PK W +WL  AEWWYN
Sbjct: 1089 TERVNQCVESYLRCMAMQEPKKWVSWLPLAEWWYN 1123


>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2811

 Score =  248 bits (634), Expect = 5e-64
 Identities = 108/215 (50%), Positives = 154/215 (71%)
 Frame = -3

Query: 647  IGNQGSLRKQVFTELHSNGIGGHSGIKATIRRVGEYFFWTTLKQDIGRWVRECGVCQAVK 468
            IG+   L++++   LH+  +GGHSGI  T +RV + F W  +++D+  +V+ C +CQ  K
Sbjct: 2335 IGHNKLLQQKILANLHTAAVGGHSGILVTYQRVKQLFSWPGMRKDVQEFVQHCDICQRAK 2394

Query: 467  GEHVKKPGLLQPLAVPQEPWRDIAMDFITGLPKSMGFEVIWVVMDRFSRYAHFVALQHPL 288
             EHVK PGLLQPL VP + W+ I MDFI GLPKS  F+ I V++D+FS++AHF+ L+HP 
Sbjct: 2395 SEHVKYPGLLQPLEVPSQSWQVITMDFIEGLPKSASFDCILVIVDKFSKFAHFLPLKHPF 2454

Query: 287  SAKTLAQTFFDHIYKLHGLPESIVSDRDSLFLSEFWQNLFKISGTRLCMSTAYHP*SDGC 108
            +A  +AQ F +HI+ +HGLP++IVSDRD +F S  W+ LF+ +GT+L MS++YHP SDG 
Sbjct: 2455 TAFGVAQLFMEHIHSIHGLPQAIVSDRDRVFTSSLWKELFRRAGTQLRMSSSYHPQSDGQ 2514

Query: 107  TERVNQCLEQYLRSMTSQVPKNWANWLSAAEWWYN 3
            TERVNQC+E +LR      P  W +WL+ A++WYN
Sbjct: 2515 TERVNQCVEMFLRCFVHSCPSRWKHWLALAQYWYN 2549


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  247 bits (631), Expect = 1e-63
 Identities = 112/215 (52%), Positives = 147/215 (68%)
 Frame = -3

Query: 647  IGNQGSLRKQVFTELHSNGIGGHSGIKATIRRVGEYFFWTTLKQDIGRWVRECGVCQAVK 468
            +G    +R  +    H++  GGHSGI+AT  R+ + F+W  LK+ +  ++REC  CQ  K
Sbjct: 1184 VGETTEIRMLLLEAYHASYFGGHSGIRATYHRIKQLFYWPGLKKQVEHYIRECPTCQITK 1243

Query: 467  GEHVKKPGLLQPLAVPQEPWRDIAMDFITGLPKSMGFEVIWVVMDRFSRYAHFVALQHPL 288
             EH+  PGLL PL VP   W  I MDFI GLPKS G +VI VV+DR ++YAHF+AL HP 
Sbjct: 1244 AEHIHIPGLLNPLEVPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYAHFLALSHPY 1303

Query: 287  SAKTLAQTFFDHIYKLHGLPESIVSDRDSLFLSEFWQNLFKISGTRLCMSTAYHP*SDGC 108
            + + + Q F D+I+KLHG+P  IV+DRD +F S F+Q +FK    +L  STA+HP +DG 
Sbjct: 1304 TVEQVVQIFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQ 1363

Query: 107  TERVNQCLEQYLRSMTSQVPKNWANWLSAAEWWYN 3
            TERVNQCLE YLRSMT Q P+ W +WL+ AEWWYN
Sbjct: 1364 TERVNQCLESYLRSMTFQEPQKWFSWLALAEWWYN 1398