BLASTX nr result

ID: Cnidium21_contig00003102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003102
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302481.1| predicted protein [Populus trichocarpa] gi|2...   230   8e-59
ref|XP_002265256.2| PREDICTED: nucleolar GTP-binding protein 1-l...   229   1e-58
emb|CBI39064.3| unnamed protein product [Vitis vinifera]              229   1e-58
ref|XP_002526509.1| nucleolar GTP-binding protein, putative [Ric...   226   1e-57
ref|XP_002889273.1| PDE318 [Arabidopsis lyrata subsp. lyrata] gi...   223   1e-56

>ref|XP_002302481.1| predicted protein [Populus trichocarpa] gi|222844207|gb|EEE81754.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  230 bits (587), Expect = 8e-59
 Identities = 112/136 (82%), Positives = 129/136 (94%)
 Frame = -1

Query: 409 ASLCAQSLTKREALERLDEGMKSLEEIFKSQGKAVDELLNIAKALRAMPVVDLETPTLCL 230
           ASLCA+S TKR+A ERL+EG++ LEE+FK +GKAVD+LLNIAK LRAMPVVDLETPTLCL
Sbjct: 103 ASLCAKSSTKRDAGERLNEGLEKLEEVFKCEGKAVDDLLNIAKTLRAMPVVDLETPTLCL 162

Query: 229 VGAPNVGKSSLVRLLSTGKPEICNYPFTTRGILMGHIHLSYQNFQVTDTPGILRRRDEDR 50
           VGAPNVGKSSLVR+LSTGKPE+CNYPFTTRGILMGHI L++Q+FQVTDTPG+L+R DEDR
Sbjct: 163 VGAPNVGKSSLVRVLSTGKPEVCNYPFTTRGILMGHIALNFQHFQVTDTPGLLKRCDEDR 222

Query: 49  NNLEKLTLSVLSYLPT 2
           NNLEKLTL+VLS+LPT
Sbjct: 223 NNLEKLTLAVLSHLPT 238


>ref|XP_002265256.2| PREDICTED: nucleolar GTP-binding protein 1-like [Vitis vinifera]
          Length = 445

 Score =  229 bits (585), Expect = 1e-58
 Identities = 112/136 (82%), Positives = 126/136 (92%)
 Frame = -1

Query: 409 ASLCAQSLTKREALERLDEGMKSLEEIFKSQGKAVDELLNIAKALRAMPVVDLETPTLCL 230
           ASLCA+SLTKREA ERL EGMK LE+IF  +GKAVD+LLNIAK LRAMPVVDLETPTLCL
Sbjct: 192 ASLCAKSLTKREAEERLGEGMKKLEDIFNHEGKAVDDLLNIAKTLRAMPVVDLETPTLCL 251

Query: 229 VGAPNVGKSSLVRLLSTGKPEICNYPFTTRGILMGHIHLSYQNFQVTDTPGILRRRDEDR 50
           VGAPNVGKSSLVR+LSTGKPE+CNYPFTTRGILMGHI  +Y++FQVTDTPG+L R D++R
Sbjct: 252 VGAPNVGKSSLVRVLSTGKPEVCNYPFTTRGILMGHIAFNYRHFQVTDTPGLLNRHDDER 311

Query: 49  NNLEKLTLSVLSYLPT 2
           NNLEKLTL+VLS+LPT
Sbjct: 312 NNLEKLTLAVLSHLPT 327


>emb|CBI39064.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score =  229 bits (585), Expect = 1e-58
 Identities = 112/136 (82%), Positives = 126/136 (92%)
 Frame = -1

Query: 409 ASLCAQSLTKREALERLDEGMKSLEEIFKSQGKAVDELLNIAKALRAMPVVDLETPTLCL 230
           ASLCA+SLTKREA ERL EGMK LE+IF  +GKAVD+LLNIAK LRAMPVVDLETPTLCL
Sbjct: 192 ASLCAKSLTKREAEERLGEGMKKLEDIFNHEGKAVDDLLNIAKTLRAMPVVDLETPTLCL 251

Query: 229 VGAPNVGKSSLVRLLSTGKPEICNYPFTTRGILMGHIHLSYQNFQVTDTPGILRRRDEDR 50
           VGAPNVGKSSLVR+LSTGKPE+CNYPFTTRGILMGHI  +Y++FQVTDTPG+L R D++R
Sbjct: 252 VGAPNVGKSSLVRVLSTGKPEVCNYPFTTRGILMGHIAFNYRHFQVTDTPGLLNRHDDER 311

Query: 49  NNLEKLTLSVLSYLPT 2
           NNLEKLTL+VLS+LPT
Sbjct: 312 NNLEKLTLAVLSHLPT 327


>ref|XP_002526509.1| nucleolar GTP-binding protein, putative [Ricinus communis]
           gi|223534184|gb|EEF35900.1| nucleolar GTP-binding
           protein, putative [Ricinus communis]
          Length = 443

 Score =  226 bits (576), Expect = 1e-57
 Identities = 110/136 (80%), Positives = 127/136 (93%)
 Frame = -1

Query: 409 ASLCAQSLTKREALERLDEGMKSLEEIFKSQGKAVDELLNIAKALRAMPVVDLETPTLCL 230
           AS+CA+SLTKREA E+L+EG + LEEIFK +GKAVD+LLNIAK LRAMPVV+LETPTLCL
Sbjct: 194 ASVCAKSLTKREAEEQLNEGREKLEEIFKCEGKAVDDLLNIAKTLRAMPVVNLETPTLCL 253

Query: 229 VGAPNVGKSSLVRLLSTGKPEICNYPFTTRGILMGHIHLSYQNFQVTDTPGILRRRDEDR 50
           VGAPNVGKSSLVR+LSTGKPE+CNYPFTTRGILMGHI   +Q+FQVTDTPG+L+R DEDR
Sbjct: 254 VGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHIAFDFQHFQVTDTPGLLKRCDEDR 313

Query: 49  NNLEKLTLSVLSYLPT 2
           NNLEKLTL+VL++LPT
Sbjct: 314 NNLEKLTLAVLTHLPT 329


>ref|XP_002889273.1| PDE318 [Arabidopsis lyrata subsp. lyrata]
           gi|297335114|gb|EFH65532.1| PDE318 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 449

 Score =  223 bits (568), Expect = 1e-56
 Identities = 109/136 (80%), Positives = 127/136 (93%)
 Frame = -1

Query: 409 ASLCAQSLTKREALERLDEGMKSLEEIFKSQGKAVDELLNIAKALRAMPVVDLETPTLCL 230
           ASLCA++L+K+EA ERL+EG++ LE +F+ QG+AVD+LL+IAK LRAMPVVDLE PTLCL
Sbjct: 199 ASLCAKALSKKEAEERLNEGVEKLELVFQQQGRAVDDLLSIAKVLRAMPVVDLEMPTLCL 258

Query: 229 VGAPNVGKSSLVRLLSTGKPEICNYPFTTRGILMGHIHLSYQNFQVTDTPGILRRRDEDR 50
           VGAPNVGKSSLVR+LSTGKPEICNYPFTTRGILMGHI L+YQ FQVTDTPG+LRR DEDR
Sbjct: 259 VGAPNVGKSSLVRILSTGKPEICNYPFTTRGILMGHIVLNYQRFQVTDTPGLLRRCDEDR 318

Query: 49  NNLEKLTLSVLSYLPT 2
           NNLEKLTL+VL++LPT
Sbjct: 319 NNLEKLTLAVLTHLPT 334


Top