BLASTX nr result

ID: Cnidium21_contig00003083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003083
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putativ...   248   9e-64
ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|2...   246   2e-63
emb|CBI15398.3| unnamed protein product [Vitis vinifera]              243   2e-62
ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   243   2e-62
ref|XP_004157478.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   231   1e-58

>ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 590

 Score =  248 bits (632), Expect = 9e-64
 Identities = 134/210 (63%), Positives = 147/210 (70%)
 Frame = +2

Query: 2   LYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYINVDCFDIHGQQKLKKRRSTFLDFCKAE 181
           LYSFLKR+ S+KVMVFFSS NSVKFHSELL+YI V+CFDIHG+QK +KR +TF DFCKAE
Sbjct: 341 LYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVECFDIHGKQKQQKRTTTFFDFCKAE 400

Query: 182 KGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGRTARGEGS 361
           KG                                               RVGRTARGEG 
Sbjct: 401 KGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIH-------------RVGRTARGEGG 447

Query: 362 KGNALLFLTPEELQFLSHLKAAKVPVKECEFPKKKLTNVQSRLEKLVANNYYLNRSAKEA 541
           KGNALLFL PEELQFL +LKAAKVPVKE EF  KKL NVQS LEKLVANNYYLN+SAK+A
Sbjct: 448 KGNALLFLIPEELQFLRYLKAAKVPVKEYEFDVKKLANVQSHLEKLVANNYYLNKSAKDA 507

Query: 542 YRAYVLAYNSHSCKDIFNVHRLDFRAVAAS 631
           YR+Y+LAYNSHS KDIFNVHRLD +AVAAS
Sbjct: 508 YRSYILAYNSHSMKDIFNVHRLDLQAVAAS 537


>ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|222845575|gb|EEE83122.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  246 bits (628), Expect = 2e-63
 Identities = 132/210 (62%), Positives = 149/210 (70%)
 Frame = +2

Query: 2   LYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYINVDCFDIHGQQKLKKRRSTFLDFCKAE 181
           LYSF KR+ S+KVMVFFSS NSVKFH++LL+YI V+CFDIHG+QK +KR STF DFCKAE
Sbjct: 325 LYSFFKRNLSKKVMVFFSSCNSVKFHADLLRYIQVECFDIHGKQKQQKRTSTFFDFCKAE 384

Query: 182 KGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGRTARGEGS 361
           KG                                               RVGRTARGEG+
Sbjct: 385 KGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIH-------------RVGRTARGEGA 431

Query: 362 KGNALLFLTPEELQFLSHLKAAKVPVKECEFPKKKLTNVQSRLEKLVANNYYLNRSAKEA 541
           KGNALLFL PEELQFL +LKAAKVPVKE EF +KKL NVQS+LEKLVANNYYLN+SAK+A
Sbjct: 432 KGNALLFLIPEELQFLRYLKAAKVPVKEYEFDQKKLANVQSQLEKLVANNYYLNKSAKDA 491

Query: 542 YRAYVLAYNSHSCKDIFNVHRLDFRAVAAS 631
           YR+Y+LAYNSHS KDIFNVHRLD +AVAAS
Sbjct: 492 YRSYMLAYNSHSMKDIFNVHRLDLQAVAAS 521


>emb|CBI15398.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  243 bits (621), Expect = 2e-62
 Identities = 131/210 (62%), Positives = 146/210 (69%)
 Frame = +2

Query: 2   LYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYINVDCFDIHGQQKLKKRRSTFLDFCKAE 181
           LYSFLKR+ S+KVMVFFSS NSVK+HSELL+YI VDC DIHG+QK +KR STF DFCKAE
Sbjct: 241 LYSFLKRNLSKKVMVFFSSCNSVKYHSELLRYIQVDCLDIHGKQKQQKRTSTFFDFCKAE 300

Query: 182 KGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGRTARGEGS 361
           KG                                               RVGRTARGEG 
Sbjct: 301 KGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIH-------------RVGRTARGEGK 347

Query: 362 KGNALLFLTPEELQFLSHLKAAKVPVKECEFPKKKLTNVQSRLEKLVANNYYLNRSAKEA 541
           KGNALLFL PEELQFL +LKAAKVPVKE E+  KKL NVQS LEKLV+NNYYLN+SAK+A
Sbjct: 348 KGNALLFLIPEELQFLRYLKAAKVPVKEYEYDVKKLANVQSHLEKLVSNNYYLNKSAKDA 407

Query: 542 YRAYVLAYNSHSCKDIFNVHRLDFRAVAAS 631
           YR+Y+LAYNSHS KDIFNVHRLD +AVA+S
Sbjct: 408 YRSYILAYNSHSMKDIFNVHRLDLQAVASS 437


>ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 1
           [Vitis vinifera]
          Length = 580

 Score =  243 bits (621), Expect = 2e-62
 Identities = 131/210 (62%), Positives = 146/210 (69%)
 Frame = +2

Query: 2   LYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYINVDCFDIHGQQKLKKRRSTFLDFCKAE 181
           LYSFLKR+ S+KVMVFFSS NSVK+HSELL+YI VDC DIHG+QK +KR STF DFCKAE
Sbjct: 329 LYSFLKRNLSKKVMVFFSSCNSVKYHSELLRYIQVDCLDIHGKQKQQKRTSTFFDFCKAE 388

Query: 182 KGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGRTARGEGS 361
           KG                                               RVGRTARGEG 
Sbjct: 389 KGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIH-------------RVGRTARGEGK 435

Query: 362 KGNALLFLTPEELQFLSHLKAAKVPVKECEFPKKKLTNVQSRLEKLVANNYYLNRSAKEA 541
           KGNALLFL PEELQFL +LKAAKVPVKE E+  KKL NVQS LEKLV+NNYYLN+SAK+A
Sbjct: 436 KGNALLFLIPEELQFLRYLKAAKVPVKEYEYDVKKLANVQSHLEKLVSNNYYLNKSAKDA 495

Query: 542 YRAYVLAYNSHSCKDIFNVHRLDFRAVAAS 631
           YR+Y+LAYNSHS KDIFNVHRLD +AVA+S
Sbjct: 496 YRSYILAYNSHSMKDIFNVHRLDLQAVASS 525


>ref|XP_004157478.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Cucumis
           sativus]
          Length = 592

 Score =  231 bits (588), Expect = 1e-58
 Identities = 124/210 (59%), Positives = 142/210 (67%)
 Frame = +2

Query: 2   LYSFLKRHQSQKVMVFFSSVNSVKFHSELLKYINVDCFDIHGQQKLKKRRSTFLDFCKAE 181
           LYSFLK++ S+KVMVFFSS NSVKFH++LL+YI VDC DIHG+QK +KR STF  F KA+
Sbjct: 347 LYSFLKKNLSKKVMVFFSSCNSVKFHADLLRYIKVDCMDIHGKQKQQKRTSTFFSFIKAQ 406

Query: 182 KGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGRTARGEGS 361
            G                                               RVGRTARGEGS
Sbjct: 407 TGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIH-------------RVGRTARGEGS 453

Query: 362 KGNALLFLTPEELQFLSHLKAAKVPVKECEFPKKKLTNVQSRLEKLVANNYYLNRSAKEA 541
           KGNALLFL PEE+QFL +LKAAKVPVKE EF  KKL NVQS LEKLV +NYYLN+SAK+A
Sbjct: 454 KGNALLFLIPEEIQFLRYLKAAKVPVKEYEFSDKKLANVQSHLEKLVGSNYYLNKSAKDA 513

Query: 542 YRAYVLAYNSHSCKDIFNVHRLDFRAVAAS 631
           YR+Y+LAYNSHS KDIFNVHRLD + +AAS
Sbjct: 514 YRSYILAYNSHSMKDIFNVHRLDLQGIAAS 543


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