BLASTX nr result

ID: Cnidium21_contig00003078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003078
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95763.1| unknown [Populus trichocarpa]                          205   2e-50
ref|XP_004169520.1| PREDICTED: uncharacterized protein At5g19025...   204   2e-50
ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containi...   204   4e-50
ref|XP_002277551.2| PREDICTED: uncharacterized protein At5g19025...   201   2e-49
emb|CBI26176.3| unnamed protein product [Vitis vinifera]              201   2e-49

>gb|ABK95763.1| unknown [Populus trichocarpa]
          Length = 229

 Score =  205 bits (521), Expect = 2e-50
 Identities = 104/181 (57%), Positives = 124/181 (68%), Gaps = 5/181 (2%)
 Frame = +3

Query: 201 DVIILILALFSGTFLISSYLSYIFHXXXXXXXXXXXXXYALDFSISIYYVSFSLFFVSTI 380
           D++ILIL LFSGTFL++SY SYIF+             +   FS   Y + F   F+ +I
Sbjct: 54  DLLILILVLFSGTFLLTSYFSYIFNSLSLLLSNSSLSLHFPPFS---YILGFFSLFILSI 110

Query: 381 LVFHLCFG--SRKCKRVGCKGLKRALEFDLQLQNEECLRLDGKSVREVDLLPWKGGKEGN 554
           L F  C G  SRKC + GCKG K+A+EFDLQLQ E+CL+    +  +VD LPWKGG   N
Sbjct: 111 LFFEFCCGPRSRKCHQPGCKGFKKAIEFDLQLQTEDCLK--STAANDVDKLPWKGGTVSN 168

Query: 555 PDYECLRGELRKMAPPNGRAVLIFRDKCGCPVAKLEGWSVKRSRKHKK---SITFNGGDH 725
           PDYECLR ELRKMAPPNGRAVL+FR KCGCPVAKLEGW  KR R+HK+   S+  NGGDH
Sbjct: 169 PDYECLRAELRKMAPPNGRAVLLFRSKCGCPVAKLEGWGPKRGRRHKRALASVAANGGDH 228

Query: 726 R 728
           R
Sbjct: 229 R 229


>ref|XP_004169520.1| PREDICTED: uncharacterized protein At5g19025-like isoform 3
           [Cucumis sativus]
          Length = 224

 Score =  204 bits (520), Expect = 2e-50
 Identities = 105/181 (58%), Positives = 125/181 (69%), Gaps = 6/181 (3%)
 Frame = +3

Query: 201 DVIILILALFSGTFLISSYLSYIFHXXXXXXXXXXXXXYALDFSISIYYVSFSLFFVSTI 380
           D++ILIL LFSGTFL++SY SYIF+                 F+   +   F LFF  TI
Sbjct: 49  DLLILILVLFSGTFLVTSYFSYIFNSLSILLSHSAPQLPQFPFT---FIAGFLLFFCVTI 105

Query: 381 LVFHLCFG--SRKCKRVGCKGLKRALEFDLQLQNEECLRLDGKSVREVDLLPWKGGKEGN 554
            VF +C G  SRKC + GCKGLK+A+EFDLQLQ EEC++   K   E+D LPWKGG E N
Sbjct: 106 GVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKSGSK---EIDKLPWKGGSEAN 162

Query: 555 PDYECLRGELRKMAPPNGRAVLIFRDKCGCPVAKLEGWSVKRSRKHKKSIT---FNGG-D 722
           PDYECLR ELRKMAPPNGRAVL+FR +CGCP+AKLEGW  KR R+HKK++     NGG D
Sbjct: 163 PDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKKALATLGLNGGRD 222

Query: 723 H 725
           H
Sbjct: 223 H 223


>ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like [Cucumis sativus]
          Length = 874

 Score =  204 bits (518), Expect = 4e-50
 Identities = 103/178 (57%), Positives = 123/178 (69%), Gaps = 5/178 (2%)
 Frame = +3

Query: 201 DVIILILALFSGTFLISSYLSYIFHXXXXXXXXXXXXXYALDFSISIYYVSFSLFFVSTI 380
           D++ILIL LFSGTFL++SY SYIF+                 F+   +   F LFF  TI
Sbjct: 49  DLLILILVLFSGTFLVTSYFSYIFNSLSILLSHSAPQLPQFPFT---FIAGFLLFFCVTI 105

Query: 381 LVFHLCFG--SRKCKRVGCKGLKRALEFDLQLQNEECLRLDGKSVREVDLLPWKGGKEGN 554
            VF +C G  SRKC + GCKGLK+A+EFDLQLQ EEC++   K   E+D LPWKGG E N
Sbjct: 106 GVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKSGSK---EIDKLPWKGGSEAN 162

Query: 555 PDYECLRGELRKMAPPNGRAVLIFRDKCGCPVAKLEGWSVKRSRKHKKSIT---FNGG 719
           PDYECLR ELRKMAPPNGRAVL+FR +CGCP+AKLEGW  KR R+HKK++     NGG
Sbjct: 163 PDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKKALATLGLNGG 220


>ref|XP_002277551.2| PREDICTED: uncharacterized protein At5g19025 [Vitis vinifera]
          Length = 216

 Score =  201 bits (512), Expect = 2e-49
 Identities = 105/180 (58%), Positives = 124/180 (68%), Gaps = 7/180 (3%)
 Frame = +3

Query: 201 DVIILILALFSGTFLISSYLSYIFHXXXXXXXXXXXXXYALDF--SISIYYVSFSLFFVS 374
           D++ILIL LFSGTFLI+SY SYI               ++L F  S   Y + F +FF  
Sbjct: 37  DILILILVLFSGTFLITSYFSYIVQSLSLILPSIILS-HSLSFRESPGPYILGFLVFFAV 95

Query: 375 TILVFHLCFG--SRKCKRVGCKGLKRALEFDLQLQNEECLRLDGKSVREVDLLPWKGGKE 548
            I+   LC G  SRKC   GCKGLK+A+EFDLQLQ EECL+    S +E+D+LPWKGG E
Sbjct: 96  FIVTIELCCGYRSRKCDNPGCKGLKKAMEFDLQLQTEECLK---SSSKEIDVLPWKGGSE 152

Query: 549 GNPDYECLRGELRKMAPPNGRAVLIFRDKCGCPVAKLEGWSVKRSRKHKK---SITFNGG 719
            NPDYECLR ELRKMAPPNGRAVL+FR +CGCP+AKLEGW  KR R+HKK   S+  NGG
Sbjct: 153 ANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGPKRGRRHKKALASLALNGG 212


>emb|CBI26176.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  201 bits (512), Expect = 2e-49
 Identities = 105/180 (58%), Positives = 124/180 (68%), Gaps = 7/180 (3%)
 Frame = +3

Query: 201 DVIILILALFSGTFLISSYLSYIFHXXXXXXXXXXXXXYALDF--SISIYYVSFSLFFVS 374
           D++ILIL LFSGTFLI+SY SYI               ++L F  S   Y + F +FF  
Sbjct: 105 DILILILVLFSGTFLITSYFSYIVQSLSLILPSIILS-HSLSFRESPGPYILGFLVFFAV 163

Query: 375 TILVFHLCFG--SRKCKRVGCKGLKRALEFDLQLQNEECLRLDGKSVREVDLLPWKGGKE 548
            I+   LC G  SRKC   GCKGLK+A+EFDLQLQ EECL+    S +E+D+LPWKGG E
Sbjct: 164 FIVTIELCCGYRSRKCDNPGCKGLKKAMEFDLQLQTEECLK---SSSKEIDVLPWKGGSE 220

Query: 549 GNPDYECLRGELRKMAPPNGRAVLIFRDKCGCPVAKLEGWSVKRSRKHKK---SITFNGG 719
            NPDYECLR ELRKMAPPNGRAVL+FR +CGCP+AKLEGW  KR R+HKK   S+  NGG
Sbjct: 221 ANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGPKRGRRHKKALASLALNGG 280


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