BLASTX nr result

ID: Cnidium21_contig00003064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003064
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242881.1| uncharacterized protein LOC100782843 [Glycin...   179   6e-43
ref|XP_002285704.2| PREDICTED: transcription initiation factor T...   178   1e-42
ref|XP_003544704.1| PREDICTED: transcription initiation factor T...   177   2e-42
ref|NP_001242342.1| uncharacterized protein LOC100806004 [Glycin...   176   4e-42
emb|CBI16511.3| unnamed protein product [Vitis vinifera]              170   3e-40

>ref|NP_001242881.1| uncharacterized protein LOC100782843 [Glycine max]
           gi|255628987|gb|ACU14838.1| unknown [Glycine max]
          Length = 200

 Score =  179 bits (454), Expect = 6e-43
 Identities = 90/121 (74%), Positives = 98/121 (80%), Gaps = 3/121 (2%)
 Frame = +2

Query: 2   DDGRSGTFSIGNDQFPASLLDLPGIVESYKTYDDSVLIKSADIGQMIMVREEGDSAPDTV 181
           +DGRSGTF IGN+QFPASLLDLP +VESYKTYDD+ LIK+ADIGQMIMVRE GD+APD +
Sbjct: 40  EDGRSGTFMIGNEQFPASLLDLPCVVESYKTYDDNSLIKTADIGQMIMVRESGDAAPDVI 99

Query: 182 EYRHGLTPPMXXXXXXXXXXEPDLNPELVKRVEKDLLKIMAGGTA---DVEVVEQDEGGR 352
           EYRHGLTPPM          EPDLNPELV RVEKDLLKIMAGGTA   DVE  EQ+EG  
Sbjct: 100 EYRHGLTPPMRDARKRRFRREPDLNPELVSRVEKDLLKIMAGGTADNLDVETAEQEEGDE 159

Query: 353 N 355
           N
Sbjct: 160 N 160


>ref|XP_002285704.2| PREDICTED: transcription initiation factor TFIID subunit 7-like
           [Vitis vinifera]
          Length = 205

 Score =  178 bits (451), Expect = 1e-42
 Identities = 94/141 (66%), Positives = 104/141 (73%), Gaps = 4/141 (2%)
 Frame = +2

Query: 2   DDGRSGTFSIGNDQFPASLLDLPGIVESYKTYDDSVLIKSADIGQMIMVREEGDSAPDTV 181
           +DGRSGTF IGND FPASLLDLP ++ESYKTYDDSVLIK+ADIGQMIMVREEGD+APD V
Sbjct: 48  EDGRSGTFVIGNDHFPASLLDLPCVLESYKTYDDSVLIKTADIGQMIMVREEGDTAPDVV 107

Query: 182 EYRHGLTPPMXXXXXXXXXXEPDLNPELVKRVEKDLLKIMAGGTADVEVVEQDEGG---- 349
           EYRHGLTPPM          EPDLNPELV+RVE+DLL IMAGGTA+  V EQ+E G    
Sbjct: 108 EYRHGLTPPMRDARKRRFRREPDLNPELVRRVERDLLNIMAGGTAE-NVAEQEEDGDEHA 166

Query: 350 RNTGXXXXXXXXXXXDLSEAG 412
           RN             D+ EAG
Sbjct: 167 RNASKKSAPAPIPKPDVPEAG 187


>ref|XP_003544704.1| PREDICTED: transcription initiation factor TFIID subunit 7-like
           [Glycine max]
          Length = 200

 Score =  177 bits (449), Expect = 2e-42
 Identities = 89/121 (73%), Positives = 98/121 (80%), Gaps = 3/121 (2%)
 Frame = +2

Query: 2   DDGRSGTFSIGNDQFPASLLDLPGIVESYKTYDDSVLIKSADIGQMIMVREEGDSAPDTV 181
           +DGRSGTF IGN+QFPASLLDLP +VESYKTYDD+ LIK+A+IGQMIMVRE GD+APD +
Sbjct: 40  EDGRSGTFMIGNEQFPASLLDLPCVVESYKTYDDNSLIKTANIGQMIMVRESGDAAPDVI 99

Query: 182 EYRHGLTPPMXXXXXXXXXXEPDLNPELVKRVEKDLLKIMAGGTA---DVEVVEQDEGGR 352
           EYRHGLTPPM          EPDLNPELV RVEKDLLKIMAGGTA   DVE  EQ+EG  
Sbjct: 100 EYRHGLTPPMRDARKRRFRREPDLNPELVSRVEKDLLKIMAGGTADNLDVETAEQEEGDE 159

Query: 353 N 355
           N
Sbjct: 160 N 160


>ref|NP_001242342.1| uncharacterized protein LOC100806004 [Glycine max]
           gi|255635493|gb|ACU18098.1| unknown [Glycine max]
          Length = 200

 Score =  176 bits (447), Expect = 4e-42
 Identities = 89/121 (73%), Positives = 97/121 (80%), Gaps = 3/121 (2%)
 Frame = +2

Query: 2   DDGRSGTFSIGNDQFPASLLDLPGIVESYKTYDDSVLIKSADIGQMIMVREEGDSAPDTV 181
           +DGRSGTF IGN+QFPASLLDLP +VESYKTYDD+ LIK+ADIGQMIMVRE GD+APD +
Sbjct: 40  EDGRSGTFMIGNEQFPASLLDLPCVVESYKTYDDNSLIKTADIGQMIMVRESGDAAPDVI 99

Query: 182 EYRHGLTPPMXXXXXXXXXXEPDLNPELVKRVEKDLLKIMAGGTA---DVEVVEQDEGGR 352
           EYRHGLTPPM          EPDLNP LV RVEKDLLKIMAGGTA   DVE  EQ+EG  
Sbjct: 100 EYRHGLTPPMRDARKRRFRREPDLNPGLVSRVEKDLLKIMAGGTADNLDVETAEQEEGDE 159

Query: 353 N 355
           N
Sbjct: 160 N 160


>emb|CBI16511.3| unnamed protein product [Vitis vinifera]
          Length = 148

 Score =  170 bits (431), Expect = 3e-40
 Identities = 83/106 (78%), Positives = 91/106 (85%)
 Frame = +2

Query: 2   DDGRSGTFSIGNDQFPASLLDLPGIVESYKTYDDSVLIKSADIGQMIMVREEGDSAPDTV 181
           +DGRSGTF IGND FPASLLDLP ++ESYKTYDDSVLIK+ADIGQMIMVREEGD+APD V
Sbjct: 39  EDGRSGTFVIGNDHFPASLLDLPCVLESYKTYDDSVLIKTADIGQMIMVREEGDTAPDVV 98

Query: 182 EYRHGLTPPMXXXXXXXXXXEPDLNPELVKRVEKDLLKIMAGGTAD 319
           EYRHGLTPPM          EPDLNPELV+RVE+DLL IMAGGTA+
Sbjct: 99  EYRHGLTPPMRDARKRRFRREPDLNPELVRRVERDLLNIMAGGTAE 144


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