BLASTX nr result

ID: Cnidium21_contig00003063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003063
         (982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285704.2| PREDICTED: transcription initiation factor T...   181   3e-43
ref|XP_004172889.1| PREDICTED: transcription initiation factor T...   177   3e-42
ref|XP_004142764.1| PREDICTED: transcription initiation factor T...   177   3e-42
gb|ABA81879.1| unknown [Solanum tuberosum]                            172   1e-40
ref|XP_003544704.1| PREDICTED: transcription initiation factor T...   172   1e-40

>ref|XP_002285704.2| PREDICTED: transcription initiation factor TFIID subunit 7-like
           [Vitis vinifera]
          Length = 205

 Score =  181 bits (458), Expect = 3e-43
 Identities = 98/181 (54%), Positives = 118/181 (65%), Gaps = 7/181 (3%)
 Frame = +3

Query: 3   SVAERIDRFXXXXXXXXXXXXXXXXXXXXGRSGTFAIGNDCFSASLLDLPAIVESYKTYD 182
           S+AERI+R                     GRSGTF IGND F ASLLDLP ++ESYKTYD
Sbjct: 21  SIAERIERLLNENSSSSEDKSLDLSFSEDGRSGTFVIGNDHFPASLLDLPCVLESYKTYD 80

Query: 183 DSVLIKTADIGQMIMVREESDSAPDAVDYRHGLTPPMXXXXXXXXXXEPDLNPELVKRID 362
           DSVLIKTADIGQMIMVREE D+APD V+YRHGLTPPM          EPDLNPELV+R++
Sbjct: 81  DSVLIKTADIGQMIMVREEGDTAPDVVEYRHGLTPPMRDARKRRFRREPDLNPELVRRVE 140

Query: 363 KDLCEMKNGGTAEIADVEVAEQDGSVRNTNKKAAPV------LAQVG-HAEEPERSDSDE 521
           +DL  +  GGTAE    +  + D   RN +KK+AP       + + G +A EP+RS+SDE
Sbjct: 141 RDLLNIMAGGTAENVAEQEEDGDEHARNASKKSAPAPIPKPDVPEAGANAGEPDRSESDE 200

Query: 522 S 524
           S
Sbjct: 201 S 201


>ref|XP_004172889.1| PREDICTED: transcription initiation factor TFIID subunit 7-like
           [Cucumis sativus]
          Length = 201

 Score =  177 bits (450), Expect = 3e-42
 Identities = 102/185 (55%), Positives = 117/185 (63%), Gaps = 11/185 (5%)
 Frame = +3

Query: 3   SVAERIDRFXXXXXXXXXXXXXXXXXXXXGRSGTFAIGNDCFSASLLDLPAIVESYKTYD 182
           SVAERI+R                     GRSGTFAIG+D F ASLLDLP +VESYKTYD
Sbjct: 12  SVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYD 71

Query: 183 DSVLIKTADIGQMIMVREESDSAPDAVDYRHGLTPPMXXXXXXXXXXEPDLNPELVKRID 362
           D+VLIK ADIGQMIMVRE SD APD+ +YRHGLTPPM          EPDLNPELV+R++
Sbjct: 72  DTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVE 131

Query: 363 KDLCEMKNGGTAEIADVEVAEQ----DGSVRNTNKKAA-------PVLAQVGHAEEPERS 509
           KDL  +  GGT E ADV VAEQ    D +  +TN K A        V+    +  EPERS
Sbjct: 132 KDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVMETETNVGEPERS 191

Query: 510 DSDES 524
           DSD+S
Sbjct: 192 DSDDS 196


>ref|XP_004142764.1| PREDICTED: transcription initiation factor TFIID subunit 7-like
           [Cucumis sativus]
          Length = 201

 Score =  177 bits (450), Expect = 3e-42
 Identities = 102/185 (55%), Positives = 117/185 (63%), Gaps = 11/185 (5%)
 Frame = +3

Query: 3   SVAERIDRFXXXXXXXXXXXXXXXXXXXXGRSGTFAIGNDCFSASLLDLPAIVESYKTYD 182
           SVAERI+R                     GRSGTFAIG+D F ASLLDLP +VESYKTYD
Sbjct: 12  SVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDLPCVVESYKTYD 71

Query: 183 DSVLIKTADIGQMIMVREESDSAPDAVDYRHGLTPPMXXXXXXXXXXEPDLNPELVKRID 362
           D+VLIK ADIGQMIMVRE SD APD+ +YRHGLTPPM          EPDLNPELV+R++
Sbjct: 72  DTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVE 131

Query: 363 KDLCEMKNGGTAEIADVEVAEQ----DGSVRNTNKKAA-------PVLAQVGHAEEPERS 509
           KDL  +  GGT E ADV VAEQ    D +  +TN K A        V+    +  EPERS
Sbjct: 132 KDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVMETETNVGEPERS 191

Query: 510 DSDES 524
           DSD+S
Sbjct: 192 DSDDS 196


>gb|ABA81879.1| unknown [Solanum tuberosum]
          Length = 197

 Score =  172 bits (436), Expect = 1e-40
 Identities = 97/184 (52%), Positives = 122/184 (66%), Gaps = 10/184 (5%)
 Frame = +3

Query: 3   SVAERIDRFXXXXXXXXXXXXXXXXXXXXGRSGTFAIGNDCFSASLLDLPAIVESYKTYD 182
           SVAERIDR                     G++G+F IG++ F ASLL+LP IVESYKTYD
Sbjct: 12  SVAERIDRLLSENSSSEDKLDLSFSED--GKTGSFVIGDEHFPASLLNLPCIVESYKTYD 69

Query: 183 DSVLIKTADIGQMIMVREESDSAPDAVDYRHGLTPPMXXXXXXXXXXEPDLNPELVKRID 362
           D+VLIK+ADIGQMIMVREE D  PD V+YRHGLTPPM          EPDLNPELV+R+D
Sbjct: 70  DNVLIKSADIGQMIMVREEGDPVPDVVEYRHGLTPPMRDARRRRFRREPDLNPELVRRVD 129

Query: 363 KDLCEMKNGGTAEIADVEVAEQ----DGSVRNTNKKAA-----PVLAQVGHA-EEPERSD 512
           KDL  + +GGTAE  D+EV EQ    + S R+ NKK A     P +++ G A E+P+R++
Sbjct: 130 KDLQNIMSGGTAENIDIEVVEQVEGGEASARHVNKKVAQPATKPDISEPGTAGEDPDRTE 189

Query: 513 SDES 524
           S++S
Sbjct: 190 SEDS 193


>ref|XP_003544704.1| PREDICTED: transcription initiation factor TFIID subunit 7-like
           [Glycine max]
          Length = 200

 Score =  172 bits (436), Expect = 1e-40
 Identities = 91/155 (58%), Positives = 110/155 (70%), Gaps = 10/155 (6%)
 Frame = +3

Query: 90  GRSGTFAIGNDCFSASLLDLPAIVESYKTYDDSVLIKTADIGQMIMVREESDSAPDAVDY 269
           GRSGTF IGN+ F ASLLDLP +VESYKTYDD+ LIKTA+IGQMIMVRE  D+APD ++Y
Sbjct: 42  GRSGTFMIGNEQFPASLLDLPCVVESYKTYDDNSLIKTANIGQMIMVRESGDAAPDVIEY 101

Query: 270 RHGLTPPMXXXXXXXXXXEPDLNPELVKRIDKDLCEMKNGGTAEIADVEVAEQ---DGSV 440
           RHGLTPPM          EPDLNPELV R++KDL ++  GGTA+  DVE AEQ   D + 
Sbjct: 102 RHGLTPPMRDARKRRFRREPDLNPELVSRVEKDLLKIMAGGTADNLDVETAEQEEGDENA 161

Query: 441 RNTNKKAAP-------VLAQVGHAEEPERSDSDES 524
           R  NKK+AP       +   + +A E +RSDS+ES
Sbjct: 162 RGANKKSAPKPAPKHDIPENLTNAGEADRSDSEES 196


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