BLASTX nr result

ID: Cnidium21_contig00003061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003061
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23872.3| unnamed protein product [Vitis vinifera]              277   1e-72
ref|XP_002276384.1| PREDICTED: 3-isopropylmalate dehydrogenase, ...   275   4e-72
ref|XP_002530452.1| 3-isopropylmalate dehydrogenase, putative [R...   259   2e-67
ref|XP_002298230.1| predicted protein [Populus trichocarpa] gi|2...   259   4e-67
sp|P29102.1|LEU3_BRANA RecName: Full=3-isopropylmalate dehydroge...   254   1e-65

>emb|CBI23872.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  277 bits (708), Expect = 1e-72
 Identities = 155/200 (77%), Positives = 167/200 (83%), Gaps = 5/200 (2%)
 Frame = -3

Query: 586 QIYNQKPVSQVSKMAVASVQVNNLGAFKP--QQRHLINSTPKRLATISCSAA---KRYTI 422
           QI+ +K   Q + MA AS+Q++    FKP  Q + L   +  RLATI CSAA   KRY+I
Sbjct: 91  QIWQKKV--QTTPMA-ASLQLS-ARPFKPHFQSKSLSKPSSIRLATIRCSAATPPKRYSI 146

Query: 421 TLLPGDGIGPEVISVAKNVLQLAASFHGIEFGFKEMPVGGAALDLTGVPLPEETLSQATN 242
           TLLPGDGIGPEVISVAKNVL+LA S  GIEFGF+EMPVGG ALDLTGVPLPEETL  A  
Sbjct: 147 TLLPGDGIGPEVISVAKNVLKLAGSLEGIEFGFQEMPVGGCALDLTGVPLPEETLLVAKQ 206

Query: 241 SDAVLLGAIGGYKWDNNEKHLKPETGLLQLREGLKVFANLRPASVLPQLVDASTLKKEVA 62
           SDAVLLGAIGGYKWD+NEKHLKPETGLLQLR GLKVFANLRPASVLPQLVDASTLKKEVA
Sbjct: 207 SDAVLLGAIGGYKWDSNEKHLKPETGLLQLRSGLKVFANLRPASVLPQLVDASTLKKEVA 266

Query: 61  EGVDLMVVRELTGGIYFGKP 2
           EGVDLMVVRELTGGIYFGKP
Sbjct: 267 EGVDLMVVRELTGGIYFGKP 286


>ref|XP_002276384.1| PREDICTED: 3-isopropylmalate dehydrogenase, chloroplastic [Vitis
           vinifera]
          Length = 405

 Score =  275 bits (704), Expect = 4e-72
 Identities = 146/174 (83%), Positives = 152/174 (87%), Gaps = 5/174 (2%)
 Frame = -3

Query: 508 FKP--QQRHLINSTPKRLATISCSAA---KRYTITLLPGDGIGPEVISVAKNVLQLAASF 344
           FKP  Q + L   +  RLATI CSAA   KRY+ITLLPGDGIGPEVISVAKNVL+LA S 
Sbjct: 12  FKPHFQSKSLSKPSSIRLATIRCSAATPPKRYSITLLPGDGIGPEVISVAKNVLKLAGSL 71

Query: 343 HGIEFGFKEMPVGGAALDLTGVPLPEETLSQATNSDAVLLGAIGGYKWDNNEKHLKPETG 164
            GIEFGF+EMPVGG ALDLTGVPLPEETL  A  SDAVLLGAIGGYKWD+NEKHLKPETG
Sbjct: 72  EGIEFGFQEMPVGGCALDLTGVPLPEETLLVAKQSDAVLLGAIGGYKWDSNEKHLKPETG 131

Query: 163 LLQLREGLKVFANLRPASVLPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGKP 2
           LLQLR GLKVFANLRPASVLPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGKP
Sbjct: 132 LLQLRSGLKVFANLRPASVLPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGKP 185


>ref|XP_002530452.1| 3-isopropylmalate dehydrogenase, putative [Ricinus communis]
           gi|223529997|gb|EEF31922.1| 3-isopropylmalate
           dehydrogenase, putative [Ricinus communis]
          Length = 406

 Score =  259 bits (663), Expect = 2e-67
 Identities = 130/155 (83%), Positives = 143/155 (92%), Gaps = 3/155 (1%)
 Frame = -3

Query: 457 TISCSA---AKRYTITLLPGDGIGPEVISVAKNVLQLAASFHGIEFGFKEMPVGGAALDL 287
           TI C+A   +KRY+ITLLPGDGIGPEVIS+AKNVL+LA +  GIEF F+EMP+GG+ALDL
Sbjct: 32  TIKCAAVTPSKRYSITLLPGDGIGPEVISIAKNVLKLAGNLEGIEFSFQEMPMGGSALDL 91

Query: 286 TGVPLPEETLSQATNSDAVLLGAIGGYKWDNNEKHLKPETGLLQLREGLKVFANLRPASV 107
            GVPLP+ETLS A  SDAVLLGAIGGYKWDNNEKHLKPETGLLQLREGL+VFANLRPA+V
Sbjct: 92  VGVPLPDETLSVAKQSDAVLLGAIGGYKWDNNEKHLKPETGLLQLREGLEVFANLRPATV 151

Query: 106 LPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGKP 2
           LPQLVDASTLKKEVAEGVD+MVVRELTGGIYFGKP
Sbjct: 152 LPQLVDASTLKKEVAEGVDVMVVRELTGGIYFGKP 186


>ref|XP_002298230.1| predicted protein [Populus trichocarpa] gi|222845488|gb|EEE83035.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  259 bits (661), Expect = 4e-67
 Identities = 136/182 (74%), Positives = 150/182 (82%), Gaps = 5/182 (2%)
 Frame = -3

Query: 532 VQVNNLGAFKPQQRHLINSTPKRLATISCSAA-----KRYTITLLPGDGIGPEVISVAKN 368
           +Q+N L   KP    L+     R + I C+AA     KRY+ITLLPGDGIGPEVISVAKN
Sbjct: 1   MQINALHPIKPI--FLLKPASLRPSRIRCAAATTKQSKRYSITLLPGDGIGPEVISVAKN 58

Query: 367 VLQLAASFHGIEFGFKEMPVGGAALDLTGVPLPEETLSQATNSDAVLLGAIGGYKWDNNE 188
           VL LA S  GIEF F+EMP+GG+ALD+ GVPLP+ETL  A  SDAVLLGAIGGYKWD NE
Sbjct: 59  VLNLAGSLEGIEFNFQEMPMGGSALDMAGVPLPDETLLAAKKSDAVLLGAIGGYKWDKNE 118

Query: 187 KHLKPETGLLQLREGLKVFANLRPASVLPQLVDASTLKKEVAEGVDLMVVRELTGGIYFG 8
           KHLKPETGLLQLREGL+VFANLRPA+VLPQLVDASTLKKEVAEGVD+MVVRELTGGIYFG
Sbjct: 119 KHLKPETGLLQLREGLEVFANLRPATVLPQLVDASTLKKEVAEGVDVMVVRELTGGIYFG 178

Query: 7   KP 2
           KP
Sbjct: 179 KP 180


>sp|P29102.1|LEU3_BRANA RecName: Full=3-isopropylmalate dehydrogenase, chloroplastic;
           Short=3-IPM-DH; Short=IMDH; AltName: Full=Beta-IPM
           dehydrogenase; Flags: Precursor gi|17827|emb|CAA42596.1|
           3-isopropylmalate dehydrogenase [Brassica napus]
          Length = 406

 Score =  254 bits (648), Expect = 1e-65
 Identities = 129/155 (83%), Positives = 137/155 (88%), Gaps = 4/155 (2%)
 Frame = -3

Query: 454 ISCSAA----KRYTITLLPGDGIGPEVISVAKNVLQLAASFHGIEFGFKEMPVGGAALDL 287
           + C+AA    KRY ITLLPGDGIGPEVIS+AKNVLQ A S  G+EF F+EMPVGGAALDL
Sbjct: 32  VRCAAASPGKKRYNITLLPGDGIGPEVISIAKNVLQQAGSLEGLEFSFQEMPVGGAALDL 91

Query: 286 TGVPLPEETLSQATNSDAVLLGAIGGYKWDNNEKHLKPETGLLQLREGLKVFANLRPASV 107
            GVPLPEET+S A  SDAVLLGAIGGYKWD NEKHLKPETGLLQLR GLKVFANLRPA+V
Sbjct: 92  VGVPLPEETVSAAKESDAVLLGAIGGYKWDKNEKHLKPETGLLQLRAGLKVFANLRPATV 151

Query: 106 LPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGKP 2
           LPQLVDASTLK+EVAEGVDLMVVRELTGGIYFG P
Sbjct: 152 LPQLVDASTLKREVAEGVDLMVVRELTGGIYFGVP 186


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