BLASTX nr result

ID: Cnidium21_contig00003033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003033
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314371.1| predicted protein [Populus trichocarpa] gi|1...   168   5e-40
ref|XP_002314368.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-39
gb|AAA81892.1| epoxide hydrolase [Solanum tuberosum]                  161   6e-38
pdb|2CJP|A Chain A, Structure Of Potato (Solanum Tuberosum) Epox...   161   6e-38
gb|AAA81889.1| epoxide hydrolase [Solanum tuberosum]                  159   2e-37

>ref|XP_002314371.1| predicted protein [Populus trichocarpa] gi|118484262|gb|ABK94011.1|
           unknown [Populus trichocarpa]
           gi|222863411|gb|EEF00542.1| predicted protein [Populus
           trichocarpa]
          Length = 323

 Score =  168 bits (425), Expect = 5e-40
 Identities = 77/124 (62%), Positives = 97/124 (78%), Gaps = 2/124 (1%)
 Frame = -3

Query: 368 RNPLANMVDSMKAFYGEDYYMVRFQEPGDMEAEIANNIGTKTFLKKFLSHREPAPFFFPK 189
           RNP   ++ ++KA YG+DYY++RFQEPG++EAE A  IGT+  LK+FL++R PAP F PK
Sbjct: 136 RNPSRKVIATLKAVYGDDYYIIRFQEPGEIEAEFAE-IGTEKVLKEFLTYRTPAPLFLPK 194

Query: 188 GTGFNGDSTDSP--LPSWLSEEDLDYYSTKYEKSGFTGPINYYRALGLTWELTAPWTGAQ 15
           G GFNG   D+P  LPSWLSEED+ YY++KYE+ GFTG +NYYR L   WELTAPWTGAQ
Sbjct: 195 GQGFNGKPLDTPVVLPSWLSEEDVKYYTSKYEQKGFTGGLNYYRNLDRNWELTAPWTGAQ 254

Query: 14  VMVP 3
           + VP
Sbjct: 255 IKVP 258


>ref|XP_002314368.1| predicted protein [Populus trichocarpa] gi|222863408|gb|EEF00539.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  166 bits (421), Expect = 1e-39
 Identities = 76/124 (61%), Positives = 97/124 (78%), Gaps = 2/124 (1%)
 Frame = -3

Query: 368 RNPLANMVDSMKAFYGEDYYMVRFQEPGDMEAEIANNIGTKTFLKKFLSHREPAPFFFPK 189
           RNP   ++ ++KA YG+DYY++RFQEPG++EAE A  IGT+  LK+FL++R PAP F PK
Sbjct: 136 RNPSRKVIATLKAVYGDDYYIIRFQEPGEIEAEFAE-IGTEKVLKEFLTYRTPAPIFLPK 194

Query: 188 GTGFNGDSTDSP--LPSWLSEEDLDYYSTKYEKSGFTGPINYYRALGLTWELTAPWTGAQ 15
           G GFNG   D+P  LPSWLSEED+ YY++K+E+ GFTG +NYYR L   WELTAPWTGAQ
Sbjct: 195 GQGFNGKPLDTPVVLPSWLSEEDVKYYTSKFEQKGFTGGLNYYRNLDRNWELTAPWTGAQ 254

Query: 14  VMVP 3
           + VP
Sbjct: 255 IKVP 258


>gb|AAA81892.1| epoxide hydrolase [Solanum tuberosum]
          Length = 321

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/124 (62%), Positives = 97/124 (78%), Gaps = 2/124 (1%)
 Frame = -3

Query: 368 RNPLANMVDSMKAFYGEDYYMVRFQEPGDMEAEIANNIGTKTFLKKFLSHREPAPFFFPK 189
           RNP  N+V+ +KA YGED+Y+ RFQ PG++EAE A  IG K+ LKK L++R+PAPF+FPK
Sbjct: 135 RNPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEFAP-IGAKSVLKKILTYRDPAPFYFPK 193

Query: 188 GTGFNGDSTDSP--LPSWLSEEDLDYYSTKYEKSGFTGPINYYRALGLTWELTAPWTGAQ 15
           G G      D+P  L SWLSEE+LDYY+ K+E++GFTG +NYYRAL + WELTAPWTGAQ
Sbjct: 194 GKGLEA-IPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRALPINWELTAPWTGAQ 252

Query: 14  VMVP 3
           V VP
Sbjct: 253 VKVP 256


>pdb|2CJP|A Chain A, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
           I (Steh1) gi|110590994|pdb|2CJP|B Chain B, Structure Of
           Potato (Solanum Tuberosum) Epoxide Hydrolase I (Steh1)
          Length = 328

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/124 (62%), Positives = 97/124 (78%), Gaps = 2/124 (1%)
 Frame = -3

Query: 368 RNPLANMVDSMKAFYGEDYYMVRFQEPGDMEAEIANNIGTKTFLKKFLSHREPAPFFFPK 189
           RNP  N+V+ +KA YGED+Y+ RFQ PG++EAE A  IG K+ LKK L++R+PAPF+FPK
Sbjct: 142 RNPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEFAP-IGAKSVLKKILTYRDPAPFYFPK 200

Query: 188 GTGFNGDSTDSP--LPSWLSEEDLDYYSTKYEKSGFTGPINYYRALGLTWELTAPWTGAQ 15
           G G      D+P  L SWLSEE+LDYY+ K+E++GFTG +NYYRAL + WELTAPWTGAQ
Sbjct: 201 GKGLEA-IPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRALPINWELTAPWTGAQ 259

Query: 14  VMVP 3
           V VP
Sbjct: 260 VKVP 263


>gb|AAA81889.1| epoxide hydrolase [Solanum tuberosum]
          Length = 321

 Score =  159 bits (403), Expect = 2e-37
 Identities = 77/124 (62%), Positives = 97/124 (78%), Gaps = 2/124 (1%)
 Frame = -3

Query: 368 RNPLANMVDSMKAFYGEDYYMVRFQEPGDMEAEIANNIGTKTFLKKFLSHREPAPFFFPK 189
           RNP  N V+ +KA YGED+Y+ RFQ PG++EAE A  IG K+ LKK L++R+PAPF+FPK
Sbjct: 135 RNPKMNTVEWLKAIYGEDHYISRFQVPGEIEAEFAP-IGAKSILKKILTYRDPAPFYFPK 193

Query: 188 GTGFNGDSTDSP--LPSWLSEEDLDYYSTKYEKSGFTGPINYYRALGLTWELTAPWTGAQ 15
           G G      D+P  L SWLSEE+LDYY+ K+E++GFTG +NYYRAL ++WELTAPWTGAQ
Sbjct: 194 GKGLEA-LPDAPVALSSWLSEEELDYYANKFEQTGFTGGVNYYRALPISWELTAPWTGAQ 252

Query: 14  VMVP 3
           V VP
Sbjct: 253 VKVP 256


Top