BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002984
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicoti...   216   6e-54
ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, I...   206   7e-51
ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases I, I...   202   7e-50
gb|AFK33543.1| unknown [Lotus japonicus]                              202   1e-49
ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycin...   202   1e-49

>gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
           gi|4960152|gb|AAD34614.1|AF153278_1 DNA-directed RNA
           polymerase IIb [Nicotiana tabacum]
          Length = 143

 Score =  216 bits (550), Expect = 6e-54
 Identities = 109/144 (75%), Positives = 117/144 (81%)
 Frame = -2

Query: 877 MADEEFEMDGGYEDEPMEPXXXXXXXXXXXXXXXXXXXXXDPLLADGEEKQAEETVERPR 698
           MAD++++MDGGY DEP+EP                      PLL +GEEK  +E VERPR
Sbjct: 1   MADDDYDMDGGYVDEPIEPEPDEGAEIEEDNGNNEDIPD--PLLGEGEEKTEQEPVERPR 58

Query: 697 KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLP 518
           KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLP
Sbjct: 59  KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 118

Query: 517 DGSYEDWGVDELIVEDSWKRQVGG 446
           DGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 DGSYEDWGVDELIVEDSWKRQVGG 142


>ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 isoform 1 [Vitis vinifera]
           gi|297741100|emb|CBI31831.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score =  206 bits (524), Expect = 7e-51
 Identities = 108/146 (73%), Positives = 115/146 (78%), Gaps = 1/146 (0%)
 Frame = -2

Query: 877 MADEEF-EMDGGYEDEPMEPXXXXXXXXXXXXXXXXXXXXXDPLLADGEEKQAEETVERP 701
           MADEE+ ++D GYEDEP EP                      P   + +EK+  ETVERP
Sbjct: 1   MADEEYNDVDMGYEDEPPEPEIEEGAEEEAENNNNEDV----PDALEEQEKEVHETVERP 56

Query: 700 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYL 521
           RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYL
Sbjct: 57  RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 116

Query: 520 PDGSYEDWGVDELIVEDSWKRQVGGD 443
           PDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 117 PDGSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Glycine max]
          Length = 142

 Score =  202 bits (515), Expect = 7e-50
 Identities = 106/146 (72%), Positives = 114/146 (78%), Gaps = 1/146 (0%)
 Frame = -2

Query: 877 MADEEFE-MDGGYEDEPMEPXXXXXXXXXXXXXXXXXXXXXDPLLADGEEKQAEETVERP 701
           MAD+++E +D GYEDEP EP                          D E+K+ E+ VERP
Sbjct: 1   MADDDYEDIDMGYEDEPPEPEIEEGAEEDLENKNDELTGEPI----DTEDKEEEQPVERP 56

Query: 700 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYL 521
           RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYL
Sbjct: 57  RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 116

Query: 520 PDGSYEDWGVDELIVEDSWKRQVGGD 443
           PDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 117 PDGSYEDWGVDELIVEDSWKRQVGGD 142


>gb|AFK33543.1| unknown [Lotus japonicus]
          Length = 144

 Score =  202 bits (514), Expect = 1e-49
 Identities = 105/146 (71%), Positives = 116/146 (79%), Gaps = 1/146 (0%)
 Frame = -2

Query: 877 MADEEFE-MDGGYEDEPMEPXXXXXXXXXXXXXXXXXXXXXDPLLADGEEKQAEETVERP 701
           MADE+++ +D GYEDEP+EP                     +PL  + EEK+  + V+RP
Sbjct: 1   MADEDYDDVDMGYEDEPVEPEIEEGAEEDLENKNEEEENGGEPL--ETEEKEEVQPVQRP 58

Query: 700 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYL 521
           RKTSKYMTKYERARILGTRALQISMNAPVMVEL GETDPLEIAMKELR+RKIPFTIRRYL
Sbjct: 59  RKTSKYMTKYERARILGTRALQISMNAPVMVELAGETDPLEIAMKELRERKIPFTIRRYL 118

Query: 520 PDGSYEDWGVDELIVEDSWKRQVGGD 443
           PDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 119 PDGSYEDWGVDELIVEDSWKRQVGGD 144


>ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycine max]
           gi|255626491|gb|ACU13590.1| unknown [Glycine max]
          Length = 142

 Score =  202 bits (514), Expect = 1e-49
 Identities = 106/146 (72%), Positives = 114/146 (78%), Gaps = 1/146 (0%)
 Frame = -2

Query: 877 MADEEFE-MDGGYEDEPMEPXXXXXXXXXXXXXXXXXXXXXDPLLADGEEKQAEETVERP 701
           MADE++E +D GYEDEP EP                          D E+K+ E+ V+RP
Sbjct: 1   MADEDYEDIDMGYEDEPPEPEIEEGAEEDVENKNDEITGESI----DTEDKEEEQPVKRP 56

Query: 700 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYL 521
           RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYL
Sbjct: 57  RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 116

Query: 520 PDGSYEDWGVDELIVEDSWKRQVGGD 443
           PDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 117 PDGSYEDWGVDELIVEDSWKRQVGGD 142