BLASTX nr result
ID: Cnidium21_contig00002971
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00002971
(460 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003543184.1| PREDICTED: zinc finger CCCH domain-containin... 139 2e-31
ref|XP_003601302.1| Zinc finger CCCH domain-containing protein [... 139 2e-31
ref|XP_003545082.1| PREDICTED: zinc finger CCCH domain-containin... 139 3e-31
ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|2... 138 5e-31
ref|XP_002314127.1| predicted protein [Populus trichocarpa] gi|2... 138 5e-31
>ref|XP_003543184.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 467
Score = 139 bits (350), Expect = 2e-31
Identities = 68/93 (73%), Positives = 78/93 (83%)
Frame = -1
Query: 460 SIRTLYVGGLDKRIDEQDIRDKFSAHGEIETVKMIPSRECAFVIYTTREGAEKAAEKLSN 281
SI+TLYVGGLD R+ EQD+RD F AHGEIE++KM+ R CAFV YTTREGAEKAAE+LSN
Sbjct: 226 SIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEELSN 285
Query: 280 MLVIKGQKLKLMWARPQTLKPESVVFDEAREQA 182
LVIKG +LKLMW RPQT KPES D+AR+QA
Sbjct: 286 KLVIKGLRLKLMWGRPQTTKPESDGSDQARQQA 318
Score = 74.3 bits (181), Expect = 9e-12
Identities = 41/77 (53%), Positives = 48/77 (62%), Gaps = 14/77 (18%)
Frame = -1
Query: 190 EQAFGKVHSNNTILKLQRTAPYYTRVQAHVCSLYGMG------------EMPGTTEFSP- 50
E ++GKV N+TILKLQRT PYY R +AH+CS Y G EMP T E S
Sbjct: 133 ESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYRHEMPVTGELSQQ 192
Query: 49 -IKDRYYGVNEAAAMKL 2
IKDRYYGVN+ A+KL
Sbjct: 193 NIKDRYYGVNDPVALKL 209
>ref|XP_003601302.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355490350|gb|AES71553.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 492
Score = 139 bits (350), Expect = 2e-31
Identities = 68/93 (73%), Positives = 78/93 (83%)
Frame = -1
Query: 460 SIRTLYVGGLDKRIDEQDIRDKFSAHGEIETVKMIPSRECAFVIYTTREGAEKAAEKLSN 281
SI+TLYVGGLD R+ EQD+RD F AHGEIE+VKM+ R CAFV YTTREGAEKAAE+LSN
Sbjct: 226 SIKTLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSN 285
Query: 280 MLVIKGQKLKLMWARPQTLKPESVVFDEAREQA 182
LVIKG +LKLMW RPQ+ KPES D+AR+QA
Sbjct: 286 KLVIKGLRLKLMWGRPQSAKPESDGLDQARQQA 318
Score = 75.9 bits (185), Expect = 3e-12
Identities = 42/77 (54%), Positives = 47/77 (61%), Gaps = 14/77 (18%)
Frame = -1
Query: 190 EQAFGKVHSNNTILKLQRTAPYYTRVQAHVCSLYGMG------------EMPGTTEFSP- 50
E +FGK N+TILKLQRT PYY R +AH+CS Y G EMP T E S
Sbjct: 133 ESSFGKARPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPVTGELSQQ 192
Query: 49 -IKDRYYGVNEAAAMKL 2
IKDRYYGVN+ AMKL
Sbjct: 193 NIKDRYYGVNDPVAMKL 209
>ref|XP_003545082.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 482
Score = 139 bits (349), Expect = 3e-31
Identities = 68/93 (73%), Positives = 78/93 (83%)
Frame = -1
Query: 460 SIRTLYVGGLDKRIDEQDIRDKFSAHGEIETVKMIPSRECAFVIYTTREGAEKAAEKLSN 281
SI+TLYVGGLD R+ EQD+RD F AHGEIE++KM+ R CAFV YTTREGAEKAAE+LSN
Sbjct: 226 SIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEELSN 285
Query: 280 MLVIKGQKLKLMWARPQTLKPESVVFDEAREQA 182
LVIKG +LKLMW RPQT KPES D+AR+QA
Sbjct: 286 KLVIKGLRLKLMWGRPQTSKPESDGSDQARQQA 318
Score = 74.7 bits (182), Expect = 7e-12
Identities = 41/77 (53%), Positives = 48/77 (62%), Gaps = 14/77 (18%)
Frame = -1
Query: 190 EQAFGKVHSNNTILKLQRTAPYYTRVQAHVCSLYGMG------------EMPGTTEFSP- 50
E ++GKV N+TILKLQRT PYY R +AH+CS Y G EMP T E S
Sbjct: 133 ESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYRHEMPETGELSQQ 192
Query: 49 -IKDRYYGVNEAAAMKL 2
IKDRYYGVN+ A+KL
Sbjct: 193 NIKDRYYGVNDPVALKL 209
>ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|222850537|gb|EEE88084.1|
predicted protein [Populus trichocarpa]
Length = 531
Score = 138 bits (347), Expect = 5e-31
Identities = 68/93 (73%), Positives = 78/93 (83%)
Frame = -1
Query: 460 SIRTLYVGGLDKRIDEQDIRDKFSAHGEIETVKMIPSRECAFVIYTTREGAEKAAEKLSN 281
SI+TLYVGGLD RI+EQD+RD+F AHGEIE++KM+P R AFV YTTREGAEKAA +LSN
Sbjct: 226 SIKTLYVGGLDARINEQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAAELSN 285
Query: 280 MLVIKGQKLKLMWARPQTLKPESVVFDEAREQA 182
LVIKG +LKLMW RPQ KPES DEAR+QA
Sbjct: 286 RLVIKGLRLKLMWGRPQAPKPESESSDEARQQA 318
Score = 74.7 bits (182), Expect = 7e-12
Identities = 41/77 (53%), Positives = 48/77 (62%), Gaps = 14/77 (18%)
Frame = -1
Query: 190 EQAFGKVHSNNTILKLQRTAPYYTRVQAHVCSLYGMG------------EMPGTTEFSP- 50
E ++GK +N+TILKLQRT PYY R +AHVCS + G EMP T E S
Sbjct: 133 ESSYGKAQANDTILKLQRTTPYYKRNRAHVCSFFARGECTRGAECPYRHEMPITGELSQQ 192
Query: 49 -IKDRYYGVNEAAAMKL 2
IKDRYYGVN+ AMKL
Sbjct: 193 NIKDRYYGVNDPVAMKL 209
>ref|XP_002314127.1| predicted protein [Populus trichocarpa] gi|222850535|gb|EEE88082.1|
predicted protein [Populus trichocarpa]
Length = 531
Score = 138 bits (347), Expect = 5e-31
Identities = 68/93 (73%), Positives = 78/93 (83%)
Frame = -1
Query: 460 SIRTLYVGGLDKRIDEQDIRDKFSAHGEIETVKMIPSRECAFVIYTTREGAEKAAEKLSN 281
SI+TLYVGGLD RI+EQD+RD+F AHGEIE++KM+P R AFV YTTREGAEKAA +LSN
Sbjct: 226 SIKTLYVGGLDARINEQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAAELSN 285
Query: 280 MLVIKGQKLKLMWARPQTLKPESVVFDEAREQA 182
LVIKG +LKLMW RPQ KPES DEAR+QA
Sbjct: 286 RLVIKGLRLKLMWGRPQAPKPESESSDEARQQA 318
Score = 74.7 bits (182), Expect = 7e-12
Identities = 41/77 (53%), Positives = 48/77 (62%), Gaps = 14/77 (18%)
Frame = -1
Query: 190 EQAFGKVHSNNTILKLQRTAPYYTRVQAHVCSLYGMG------------EMPGTTEFSP- 50
E ++GK +N+TILKLQRT PYY R +AHVCS + G EMP T E S
Sbjct: 133 ESSYGKAQANDTILKLQRTTPYYKRNRAHVCSFFARGECTRGAECPYRHEMPITGELSQQ 192
Query: 49 -IKDRYYGVNEAAAMKL 2
IKDRYYGVN+ AMKL
Sbjct: 193 NIKDRYYGVNDPVAMKL 209