BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002942
         (1348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_563657.1| ATP-dependent Clp protease, protease subunit [A...   452   e-125
ref|XP_002889406.1| hypothetical protein ARALYDRAFT_887394 [Arab...   451   e-124
ref|NP_001242516.1| uncharacterized protein LOC100798621 [Glycin...   447   e-123
gb|ABA41488.1| ATP-dependent Clp protease proteolytic subunit [C...   446   e-123
ref|XP_002277104.1| PREDICTED: ATP-dependent Clp protease proteo...   446   e-123

>ref|NP_563657.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana]
            gi|75313059|sp|Q9S834.1|CLPP5_ARATH RecName:
            Full=ATP-dependent Clp protease proteolytic subunit 5,
            chloroplastic; AltName: Full=Endopeptidase ClpP5;
            Short=nClpP5; AltName: Full=nClpP1; Flags: Precursor
            gi|9972387|gb|AAG10637.1|AC022521_15 ATP-dependent Clp
            protease subunit ClpP [Arabidopsis thaliana]
            gi|4887543|emb|CAB43488.1| ATP-dependent Clp protease
            subunit ClpP [Arabidopsis thaliana]
            gi|5360579|dbj|BAA82065.1| nClpP1 [Arabidopsis thaliana]
            gi|21536639|gb|AAM60971.1| ATP-dependent Clp protease
            proteolytic subunit ClpP5 [Arabidopsis thaliana]
            gi|89274139|gb|ABD65590.1| At1g02560 [Arabidopsis
            thaliana] gi|332189323|gb|AEE27444.1| ATP-dependent Clp
            protease, protease subunit [Arabidopsis thaliana]
          Length = 298

 Score =  452 bits (1164), Expect = e-125
 Identities = 230/265 (86%), Positives = 242/265 (91%), Gaps = 5/265 (1%)
 Frame = -1

Query: 1117 ISLPQFNPLLIRK-----NDKKKVGVSSVRAVYSGGFRAPERSSLPGLWSIRDDLQVPSS 953
            +SLP F PL  RK     +D+K    S+ +AVYSG    PE  S  G+WSIRDDLQVPSS
Sbjct: 34   LSLP-FEPLRSRKTNKLVSDRKNWKNSTPKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSS 92

Query: 952  PYFPAYAQAQGPPPMMQERFQSVVSQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPT 773
            PYFPAYAQ QGPPPM+QERFQS++SQLFQ+RIIRCGGAVDDDMANIIVAQLLYLDAVDPT
Sbjct: 93   PYFPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPT 152

Query: 772  KDILMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 593
            KDI+MYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN
Sbjct: 153  KDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212

Query: 592  SRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSA 413
            SRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYL+YHTGQSLEKINQDTDRDFFMSA
Sbjct: 213  SRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSA 272

Query: 412  KEAKEYGLIDGVIMNPLKALQPLAA 338
            KEAKEYGLIDGVIMNPLKALQPLAA
Sbjct: 273  KEAKEYGLIDGVIMNPLKALQPLAA 297


>ref|XP_002889406.1| hypothetical protein ARALYDRAFT_887394 [Arabidopsis lyrata subsp.
            lyrata] gi|297335248|gb|EFH65665.1| hypothetical protein
            ARALYDRAFT_887394 [Arabidopsis lyrata subsp. lyrata]
          Length = 298

 Score =  451 bits (1160), Expect = e-124
 Identities = 229/265 (86%), Positives = 241/265 (90%), Gaps = 5/265 (1%)
 Frame = -1

Query: 1117 ISLPQFNPLLIRK-----NDKKKVGVSSVRAVYSGGFRAPERSSLPGLWSIRDDLQVPSS 953
            +SLP F PL  RK     +D+K    S+ +AVYSG    PE  S  G+WSIRDDLQVPSS
Sbjct: 34   LSLP-FEPLRSRKTKKLVSDRKNWKNSTPKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSS 92

Query: 952  PYFPAYAQAQGPPPMMQERFQSVVSQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPT 773
            PYFP YAQ QGPPPM+QERFQS++SQLFQ+RIIRCGGAVDDDMANIIVAQLLYLDAVDPT
Sbjct: 93   PYFPVYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPT 152

Query: 772  KDILMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 593
            KDI+MYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN
Sbjct: 153  KDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212

Query: 592  SRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSA 413
            SRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYL+YHTGQSLEKINQDTDRDFFMSA
Sbjct: 213  SRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSA 272

Query: 412  KEAKEYGLIDGVIMNPLKALQPLAA 338
            KEAKEYGLIDGVIMNPLKALQPLAA
Sbjct: 273  KEAKEYGLIDGVIMNPLKALQPLAA 297


>ref|NP_001242516.1| uncharacterized protein LOC100798621 [Glycine max]
            gi|255645951|gb|ACU23464.1| unknown [Glycine max]
          Length = 304

 Score =  447 bits (1149), Expect = e-123
 Identities = 223/263 (84%), Positives = 238/263 (90%), Gaps = 1/263 (0%)
 Frame = -1

Query: 1117 ISLPQFNPLLIRKNDKKKVGV-SSVRAVYSGGFRAPERSSLPGLWSIRDDLQVPSSPYFP 941
            +S P  +  L +  + +K+   S+V+AVY   F  PERSS PG+WSIR DLQVPSSPYFP
Sbjct: 34   LSFPALSRNLRKSVEDRKINKKSAVKAVYGDEFWTPERSSRPGIWSIRSDLQVPSSPYFP 93

Query: 940  AYAQAQGPPPMMQERFQSVVSQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIL 761
             YAQ QGPPPM+ ERFQSV+SQLFQ+RIIRCGGAVDDDMANIIVAQLLYLDAVDP KDI+
Sbjct: 94   TYAQGQGPPPMVAERFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIV 153

Query: 760  MYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIM 581
            MYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIM
Sbjct: 154  MYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIM 213

Query: 580  IHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAK 401
            IHQPLGGAQGGQTDIDIQANEMLHHKANLNGYL+YHTGQSL+KINQDTDRDFFMSAKEAK
Sbjct: 214  IHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLDKINQDTDRDFFMSAKEAK 273

Query: 400  EYGLIDGVIMNPLKALQPLAATA 332
            EYGLIDGVIMNPLKALQPL A A
Sbjct: 274  EYGLIDGVIMNPLKALQPLEAAA 296


>gb|ABA41488.1| ATP-dependent Clp protease proteolytic subunit [Carica papaya]
          Length = 306

 Score =  446 bits (1148), Expect = e-123
 Identities = 232/289 (80%), Positives = 249/289 (86%), Gaps = 6/289 (2%)
 Frame = -1

Query: 1183 STTCLLNNSILFXXXXXXXXXSISLP-QFNPLLIRK-----NDKKKVGVSSVRAVYSGGF 1022
            S + L  NS+LF         S SL     PL  RK     +++KKV  S+ +AVY+   
Sbjct: 10   SASSLRFNSLLFSPNPSSSFESQSLCLPLEPLRSRKLKKLVSNQKKVRNSTAKAVYTSNL 69

Query: 1021 RAPERSSLPGLWSIRDDLQVPSSPYFPAYAQAQGPPPMMQERFQSVVSQLFQHRIIRCGG 842
            R PE SS  G+WSIRDDLQ+PSSPYFPAYAQ QGPPPM+QERFQSV+SQLFQHRIIRCGG
Sbjct: 70   RMPE-SSHQGIWSIRDDLQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQHRIIRCGG 128

Query: 841  AVDDDMANIIVAQLLYLDAVDPTKDILMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVG 662
            AVDDDMANIIVAQLLYLDAVDP KDI+MYVNSPGGSVTAGMA+FDTMRHIRPDVSTVCVG
Sbjct: 129  AVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAVFDTMRHIRPDVSTVCVG 188

Query: 661  LAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYL 482
            LAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLN YL
Sbjct: 189  LAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNSYL 248

Query: 481  SYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAT 335
            +YHTGQSLE+INQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPL A+
Sbjct: 249  AYHTGQSLERINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLTAS 297


>ref|XP_002277104.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
            chloroplastic isoform 1 [Vitis vinifera]
            gi|297743987|emb|CBI36957.3| unnamed protein product
            [Vitis vinifera]
          Length = 289

 Score =  446 bits (1146), Expect = e-123
 Identities = 232/292 (79%), Positives = 250/292 (85%), Gaps = 5/292 (1%)
 Frame = -1

Query: 1192 MAHSTTCLLNNSILFXXXXXXXXXSISLP----QFNPLLIRKNDKKKVGVSSVRAVYSGG 1025
            MAH  TC+  NS++F         S  L     +F  L+     +K++ V+ V+A YSG 
Sbjct: 1    MAH--TCVAFNSLIFSSNPTSSSDSHKLSFSSRKFTKLV---GSEKRLRVAPVKAAYSGE 55

Query: 1024 FRAPERSSLPGLWSIRDDLQVPSSPYFPAYAQA-QGPPPMMQERFQSVVSQLFQHRIIRC 848
            F AP+++S  G WSIRDDLQ+PSS YFP YAQ  QGPPPM+QERFQSVVSQLFQHRIIRC
Sbjct: 56   FWAPDKNSRQGTWSIRDDLQIPSSAYFPTYAQGGQGPPPMVQERFQSVVSQLFQHRIIRC 115

Query: 847  GGAVDDDMANIIVAQLLYLDAVDPTKDILMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVC 668
            GGAVDDDMANIIVAQLLYLDAVDP KDI+MYVNSPGGSVTAGMAIFDTMRHIRPDVSTVC
Sbjct: 116  GGAVDDDMANIIVAQLLYLDAVDPDKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVC 175

Query: 667  VGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNG 488
            VGLAASMGAFLLS GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNG
Sbjct: 176  VGLAASMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNG 235

Query: 487  YLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAATA 332
            YLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI+NPLKAL+PL ATA
Sbjct: 236  YLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKALKPLVATA 287