BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002918
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   165   4e-39
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   155   2e-36
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       153   1e-35
gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]       150   1e-34
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   148   5e-34

>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/161 (48%), Positives = 116/161 (72%)
 Frame = -1

Query: 484 MGRTIHVSGFRNLVPAEDLKALLEKYTGRDTVYAVEVKESRKQGNAPYARIQFISSQNAE 305
           M +TI V GF ++V A+++K  LEKYTG  T+ A+E+K+ R   +  +A++QF S + AE
Sbjct: 1   MSKTIQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGASMTHAKVQFTSFELAE 60

Query: 304 YIIALADQRRLWHGTRYLRAWANDIDIIKKPKVRTVVDQMEHVTLHFGCQISKKSYSVFW 125
           +II L  ++++W+G  YL+A   D+DII KP  R  +  M+ +TLHFGCQ+S + + V W
Sbjct: 61  FIITLC-KKKVWYGRNYLKAREMDLDIIPKP--RAFLHSMDRITLHFGCQMSDERFCVLW 117

Query: 124 KKTDVNVQFGSGLHKFYFYMSHESVDYKLQLSSENIWKIEL 2
           K  +V+V+FGSGL KFYF++SH S +YKL+LS ENIW+I+L
Sbjct: 118 KAINVSVKFGSGLRKFYFFLSHGSEEYKLELSYENIWQIQL 158


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/161 (49%), Positives = 112/161 (69%)
 Frame = -1

Query: 484 MGRTIHVSGFRNLVPAEDLKALLEKYTGRDTVYAVEVKESRKQGNAPYARIQFISSQNAE 305
           MG+TI V G  + V A ++K  LEKYTG  T+ A+E+K+ +   +  +A++QF S + AE
Sbjct: 1   MGKTIQVYGVPSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVSMTHAKVQFTSLRLAE 60

Query: 304 YIIALADQRRLWHGTRYLRAWANDIDIIKKPKVRTVVDQMEHVTLHFGCQISKKSYSVFW 125
            II+LA Q  LW+G  YL+A   D+DII KP  RT +  M+ +TLHFG Q+S + + V W
Sbjct: 61  LIISLAKQ--LWYGGNYLKAREMDLDIIPKP--RTFLHSMDRITLHFGYQMSNERFCVLW 116

Query: 124 KKTDVNVQFGSGLHKFYFYMSHESVDYKLQLSSENIWKIEL 2
           K  +V+V+FG GL KFYF++SH S +YKL+LS ENIW+I+L
Sbjct: 117 KAINVSVKFGFGLRKFYFFLSHGSEEYKLELSCENIWQIQL 157


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  153 bits (387), Expect = 1e-35
 Identities = 82/161 (50%), Positives = 114/161 (70%)
 Frame = -1

Query: 484 MGRTIHVSGFRNLVPAEDLKALLEKYTGRDTVYAVEVKESRKQGNAPYARIQFISSQNAE 305
           MG+TI V GF  L+ AE +K  LE +TG  TVYA+EVK+S K G   +A++QF ++++AE
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQS-KGGRRAFAKVQFANNKSAE 59

Query: 304 YIIALADQRRLWHGTRYLRAWANDIDIIKKPKVRTVVDQMEHVTLHFGCQISKKSYSVFW 125
           +II LA  + L++G  YL+AW    DI++    RT V+ M+ VTL+FGCQIS K ++V  
Sbjct: 60  FIIDLAS-KGLYYGPSYLKAWEMKTDIVQP---RTYVEHMDGVTLNFGCQISDKKFAVLG 115

Query: 124 KKTDVNVQFGSGLHKFYFYMSHESVDYKLQLSSENIWKIEL 2
            K DV+++FG GL K YF++SH S DYKLQLS ENIW++ L
Sbjct: 116 SK-DVSIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVL 155


>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
          Length = 479

 Score =  150 bits (379), Expect = 1e-34
 Identities = 83/161 (51%), Positives = 112/161 (69%)
 Frame = -1

Query: 484 MGRTIHVSGFRNLVPAEDLKALLEKYTGRDTVYAVEVKESRKQGNAPYARIQFISSQNAE 305
           MG+TI V GF  L+ AE +K  LE +TG  TVYA+EVK+S K G   +AR+QF S+++AE
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQS-KGGRRSFARVQFASNKSAE 59

Query: 304 YIIALADQRRLWHGTRYLRAWANDIDIIKKPKVRTVVDQMEHVTLHFGCQISKKSYSVFW 125
            II LA    L++G  YL+AW  + DI++    RT V  M+ VTL+FGCQIS K ++V  
Sbjct: 60  LIIDLASMG-LYYGPSYLKAWEMNTDIVQP---RTYVQHMDGVTLNFGCQISDKKFAVLG 115

Query: 124 KKTDVNVQFGSGLHKFYFYMSHESVDYKLQLSSENIWKIEL 2
            K DV+++FG GL K YF++S+ S DYKLQLS ENIW++ L
Sbjct: 116 SK-DVSIKFGIGLKKIYFFLSYGSSDYKLQLSYENIWQVVL 155


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
           gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
           [Solanum lycopersicum]
          Length = 1114

 Score =  148 bits (373), Expect = 5e-34
 Identities = 81/161 (50%), Positives = 114/161 (70%)
 Frame = -1

Query: 484 MGRTIHVSGFRNLVPAEDLKALLEKYTGRDTVYAVEVKESRKQGNAPYARIQFISSQNAE 305
           MG+TI V GF  L+ AE +K+ LEKYTG  TV A+EVK+S K G+  +A++QF  + +A+
Sbjct: 1   MGKTIQVFGFPYLLSAEVVKSFLEKYTGYGTVCALEVKQS-KGGSRAFAKVQFADNISAD 59

Query: 304 YIIALADQRRLWHGTRYLRAWANDIDIIKKPKVRTVVDQMEHVTLHFGCQISKKSYSVFW 125
            II LA+ R L+ G+ YL+AW    DI++   +R  VDQM+ +TL+FGCQIS   ++V  
Sbjct: 60  KIITLANNR-LYFGSSYLKAWEMKTDIVQ---LRAYVDQMDGITLNFGCQISDDKFAVLG 115

Query: 124 KKTDVNVQFGSGLHKFYFYMSHESVDYKLQLSSENIWKIEL 2
             T+V++QFG GL KF+F++S  S DYKLQLS ENIW++ L
Sbjct: 116 S-TEVSIQFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVL 155