BLASTX nr result

ID: Cnidium21_contig00002912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002912
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB62555.1| potassium channel [Daucus carota]                      50   2e-09
gb|ACI45550.2| potassium channel [Nicotiana tabacum]                   50   6e-07
ref|XP_002308628.1| predicted protein [Populus trichocarpa] gi|2...    50   1e-06
dbj|BAD81035.1| potassium channel NtKC1 [Nicotiana tabacum]            49   2e-06
ref|XP_003631831.1| PREDICTED: potassium channel KAT3-like [Viti...    50   2e-06

>emb|CAB62555.1| potassium channel [Daucus carota]
          Length = 629

 Score = 50.1 bits (118), Expect(2) = 2e-09
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = +1

Query: 115 FKVNGIWVGYTYSMNWSIVMLTTVSYRDLYSEN 213
           F+   IW+GYTY+M WSIV LTT  Y DLYS+N
Sbjct: 240 FENRSIWLGYTYAMYWSIVTLTTTGYGDLYSKN 272



 Score = 38.1 bits (87), Expect(2) = 2e-09
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 8   ITVLLVHSVTCFYYQLAFXXXXXVPEEKWIGHHLDN 115
           +T+  VHS  CFY+ LA      +PE+ WIG  +DN
Sbjct: 206 VTLFAVHSAACFYFWLAI--HHKIPEQTWIGAQVDN 239


>gb|ACI45550.2| potassium channel [Nicotiana tabacum]
          Length = 641

 Score = 50.4 bits (119), Expect(2) = 6e-07
 Identities = 22/33 (66%), Positives = 23/33 (69%)
 Frame = +1

Query: 115 FKVNGIWVGYTYSMNWSIVMLTTVSYRDLYSEN 213
           FK   IW GYTYSM WSI  LTTV Y DLY+ N
Sbjct: 251 FKTKSIWQGYTYSMYWSITTLTTVGYGDLYAVN 283



 Score = 29.3 bits (64), Expect(2) = 6e-07
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 8   ITVLLVHSVTCFYYQLAFXXXXXVPEEKWIGHHLDNSK 121
           +T+  VHS  CFY+ LA        E+ WIG ++ + K
Sbjct: 217 VTLFSVHSAGCFYFWLATRYHN--SEDTWIGKNIPDFK 252


>ref|XP_002308628.1| predicted protein [Populus trichocarpa] gi|222854604|gb|EEE92151.1|
           predicted protein [Populus trichocarpa]
          Length = 586

 Score = 50.1 bits (118), Expect(2) = 1e-06
 Identities = 21/33 (63%), Positives = 26/33 (78%)
 Frame = +1

Query: 115 FKVNGIWVGYTYSMNWSIVMLTTVSYRDLYSEN 213
           F+   IW+GYTYS+ WSIV LTTV Y DL++EN
Sbjct: 240 FEQRSIWLGYTYSIYWSIVTLTTVGYGDLHAEN 272



 Score = 28.5 bits (62), Expect(2) = 1e-06
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 8   ITVLLVHSVTCFYYQLAFXXXXXVPEEKWIGHHLDN 115
           +T+ +VHS  C YY +A           WIG H+++
Sbjct: 206 VTLFVVHSAGCIYYWIA--VHHDTEGNTWIGKHVED 239


>dbj|BAD81035.1| potassium channel NtKC1 [Nicotiana tabacum]
          Length = 639

 Score = 48.5 bits (114), Expect(2) = 2e-06
 Identities = 21/33 (63%), Positives = 22/33 (66%)
 Frame = +1

Query: 115 FKVNGIWVGYTYSMNWSIVMLTTVSYRDLYSEN 213
           FK   IW GYTYSM WSI  L TV Y DLY+ N
Sbjct: 249 FKTKSIWQGYTYSMYWSITTLATVGYGDLYAVN 281



 Score = 29.6 bits (65), Expect(2) = 2e-06
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 8   ITVLLVHSVTCFYYQLAFXXXXXVPEEKWIGHHLDNSK 121
           +T+  VHS  CFY+ LA        E+ WIG ++ + K
Sbjct: 215 VTLFAVHSAGCFYFWLATRYHN--SEDTWIGKNIPDFK 250


>ref|XP_003631831.1| PREDICTED: potassium channel KAT3-like [Vitis vinifera]
           gi|296081948|emb|CBI20953.3| unnamed protein product
           [Vitis vinifera]
          Length = 631

 Score = 49.7 bits (117), Expect(2) = 2e-06
 Identities = 21/33 (63%), Positives = 26/33 (78%)
 Frame = +1

Query: 115 FKVNGIWVGYTYSMNWSIVMLTTVSYRDLYSEN 213
           F+   IW+GYTYS+ WSIV LTTV Y DL++EN
Sbjct: 239 FEHRSIWLGYTYSIYWSIVTLTTVGYGDLHAEN 271



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 8   ITVLLVHSVTCFYYQLAFXXXXXVPEEKWIG 100
           +T+  VHS  CFYY LA        ++ WIG
Sbjct: 205 VTLFAVHSAGCFYYWLAI--HHKTSKKTWIG 233


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