BLASTX nr result

ID: Cnidium21_contig00002908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002908
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O82569.1|SUI1_PIMBR RecName: Full=Protein translation factor ...   210   4e-52
ref|XP_003532130.1| PREDICTED: protein translation factor SUI1 h...   190   4e-46
ref|XP_004152930.1| PREDICTED: protein translation factor SUI1 h...   189   1e-45
gb|ABQ42057.1| putative translation factor [Sonneratia alba] gi|...   189   1e-45
gb|ABQ42058.1| putative translation factor [Sonneratia caseolaris]    187   3e-45

>sp|O82569.1|SUI1_PIMBR RecName: Full=Protein translation factor SUI1 homolog
           gi|3659907|gb|AAC61599.1| protein translation factor
           SUI1 homolog [Pimpinella brachycarpa]
          Length = 113

 Score =  210 bits (534), Expect = 4e-52
 Identities = 103/113 (91%), Positives = 107/113 (94%)
 Frame = -2

Query: 510 MVDIDIQIPASFDPFAEAELTDATGSAKEYVHIRVQQRNGRKSLTTVQGLKKELSYDKIL 331
           MVD DIQIP SFDPFAEAE+TDATGS KEYVHIR+QQRNGRKSLTTVQGLKKELSYDKIL
Sbjct: 1   MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKIL 60

Query: 330 KDVKKAFCCNGTVVNDKELGKVIQLQGDQRKNVSNFLVQAGIVKKDQIKVHGF 172
           KD+KKA CCNGTVVNDKELGKVIQLQGDQRKNVS F+VQAGIVKKDQIKVH F
Sbjct: 61  KDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113


>ref|XP_003532130.1| PREDICTED: protein translation factor SUI1 homolog 2-like [Glycine
           max]
          Length = 112

 Score =  190 bits (483), Expect = 4e-46
 Identities = 90/113 (79%), Positives = 106/113 (93%)
 Frame = -2

Query: 510 MVDIDIQIPASFDPFAEAELTDATGSAKEYVHIRVQQRNGRKSLTTVQGLKKELSYDKIL 331
           MVD++IQ+P++FDPFAEA  +DA G AKEYVHIR+QQRNG+KSLTTVQGLKKE SY+KIL
Sbjct: 1   MVDLEIQVPSAFDPFAEARESDAPG-AKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKIL 59

Query: 330 KDVKKAFCCNGTVVNDKELGKVIQLQGDQRKNVSNFLVQAGIVKKDQIKVHGF 172
           KD+KK FCCNGTVV DKELGK+IQLQGDQRKNVS+FLVQAG+V+KDQ+K+HGF
Sbjct: 60  KDLKKDFCCNGTVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVRKDQVKIHGF 112


>ref|XP_004152930.1| PREDICTED: protein translation factor SUI1 homolog 2-like [Cucumis
           sativus] gi|449523439|ref|XP_004168731.1| PREDICTED:
           protein translation factor SUI1 homolog 2-like [Cucumis
           sativus]
          Length = 112

 Score =  189 bits (479), Expect = 1e-45
 Identities = 91/113 (80%), Positives = 104/113 (92%)
 Frame = -2

Query: 510 MVDIDIQIPASFDPFAEAELTDATGSAKEYVHIRVQQRNGRKSLTTVQGLKKELSYDKIL 331
           MVD+D+QIP++FDPFA+A+ +DA G+ KEYVHIRVQQRNG+K LTTVQGLKKE SYDKIL
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGT-KEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 59

Query: 330 KDVKKAFCCNGTVVNDKELGKVIQLQGDQRKNVSNFLVQAGIVKKDQIKVHGF 172
           KD+KK FCCNG VV DKELGK+IQLQGDQRKNVS FLVQAG+VKKDQIK+HGF
Sbjct: 60  KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112


>gb|ABQ42057.1| putative translation factor [Sonneratia alba]
           gi|146454786|gb|ABQ42059.1| putative translation factor
           [Sonneratia ovata] gi|146454788|gb|ABQ42060.1| putative
           translation factor [Sonneratia apetala]
          Length = 114

 Score =  189 bits (479), Expect = 1e-45
 Identities = 90/114 (78%), Positives = 101/114 (88%)
 Frame = -2

Query: 513 YMVDIDIQIPASFDPFAEAELTDATGSAKEYVHIRVQQRNGRKSLTTVQGLKKELSYDKI 334
           +MVD+D Q+P +FDPFA+A   D+   AKEYVHIRVQQRNGRKSLTTVQGLKKE SY+KI
Sbjct: 1   FMVDLDAQVPTAFDPFADANAEDSGAGAKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKI 60

Query: 333 LKDVKKAFCCNGTVVNDKELGKVIQLQGDQRKNVSNFLVQAGIVKKDQIKVHGF 172
           LKD+KK FCCNGTVV D ELG+VIQLQGDQRKNVS FLVQAGIVKKD+IK+HGF
Sbjct: 61  LKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDRIKIHGF 114


>gb|ABQ42058.1| putative translation factor [Sonneratia caseolaris]
          Length = 114

 Score =  187 bits (475), Expect = 3e-45
 Identities = 89/114 (78%), Positives = 101/114 (88%)
 Frame = -2

Query: 513 YMVDIDIQIPASFDPFAEAELTDATGSAKEYVHIRVQQRNGRKSLTTVQGLKKELSYDKI 334
           +MVD+D Q+P +FDPFA+A   D+   AKEYVHIRVQQRNGRKSLTTVQGLKKE SY+KI
Sbjct: 1   FMVDLDAQVPTAFDPFADANAEDSGAGAKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKI 60

Query: 333 LKDVKKAFCCNGTVVNDKELGKVIQLQGDQRKNVSNFLVQAGIVKKDQIKVHGF 172
           LKD+KK FCCNGTVV D ELG+VIQLQGDQRKNVS FLVQAGIVKK++IK+HGF
Sbjct: 61  LKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKERIKIHGF 114


Top