BLASTX nr result

ID: Cnidium21_contig00002871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002871
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270509.2| PREDICTED: cohesin subunit SA-1-like [Vitis ...   291   1e-76
emb|CBI32283.3| unnamed protein product [Vitis vinifera]              291   1e-76
ref|XP_004165309.1| PREDICTED: cohesin subunit SA-1-like, partia...   280   4e-73
ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumi...   280   4e-73
ref|XP_002520706.1| stromal antigen, putative [Ricinus communis]...   278   1e-72

>ref|XP_002270509.2| PREDICTED: cohesin subunit SA-1-like [Vitis vinifera]
          Length = 1143

 Score =  291 bits (745), Expect = 1e-76
 Identities = 164/268 (61%), Positives = 184/268 (68%), Gaps = 3/268 (1%)
 Frame = -1

Query: 798 IRPRVLAPETRPKGSNRKRVTGEASVPELEPYNTLIEVIKGDRKNIPRVVKLWVESYEKD 619
           + PR  A   R +GS+      + S         LIEVIKG+ K IP+VVKLWVE YEKD
Sbjct: 56  VEPRARAKRNRTEGSSTAAKKFDQS---------LIEVIKGNGKLIPQVVKLWVEQYEKD 106

Query: 618 PKPAMVELLTMLFEACGAKYRIQGEFXXXXXXXXXXXXXXXXARDGEIEDYQNFKK-EFK 442
           PKPAMVELL MLFEACGAKY ++ E                 AR GE EDYQ+ KK EFK
Sbjct: 107 PKPAMVELLMMLFEACGAKYHLREELLDETDVDDVVVALVNLARRGEAEDYQSSKKKEFK 166

Query: 441 IFKDNLVIFWDNLVAECQNGPLYDQVLFDKCIIYFIIALSCSTPKVYRQVASLMGFVLVT 262
            FKDNLV FWDNLV ECQNGPL+DQVLFDKC+ Y IIALSC+ P+VYRQVASLMG  LVT
Sbjct: 167 NFKDNLVSFWDNLVIECQNGPLFDQVLFDKCVDY-IIALSCTPPRVYRQVASLMGLQLVT 225

Query: 261 SFINVVNDLGAQRETTQRQLNAEMKKTYDGPRVESLKNRVTVTHENITMVEGMIHKIVMR 82
           SFI V   LGAQRETTQRQLNAE KK  +GPRVESL  R++ THE IT++E M+ KI   
Sbjct: 226 SFITVAKMLGAQRETTQRQLNAEKKKRTEGPRVESLNKRLSTTHEKITVIEEMMRKIFTG 285

Query: 81  LFVNSYG--YSDIRMLCIHSLDVWIQSY 4
           LFV+ Y     DIRM CI SL VWI SY
Sbjct: 286 LFVHRYRDIDQDIRMSCIQSLGVWIISY 313


>emb|CBI32283.3| unnamed protein product [Vitis vinifera]
          Length = 1144

 Score =  291 bits (745), Expect = 1e-76
 Identities = 164/268 (61%), Positives = 184/268 (68%), Gaps = 3/268 (1%)
 Frame = -1

Query: 798 IRPRVLAPETRPKGSNRKRVTGEASVPELEPYNTLIEVIKGDRKNIPRVVKLWVESYEKD 619
           + PR  A   R +GS+      + S         LIEVIKG+ K IP+VVKLWVE YEKD
Sbjct: 56  VEPRARAKRNRTEGSSTAAKKFDQS---------LIEVIKGNGKLIPQVVKLWVEQYEKD 106

Query: 618 PKPAMVELLTMLFEACGAKYRIQGEFXXXXXXXXXXXXXXXXARDGEIEDYQNFKK-EFK 442
           PKPAMVELL MLFEACGAKY ++ E                 AR GE EDYQ+ KK EFK
Sbjct: 107 PKPAMVELLMMLFEACGAKYHLREELLDETDVDDVVVALVNLARRGEAEDYQSSKKKEFK 166

Query: 441 IFKDNLVIFWDNLVAECQNGPLYDQVLFDKCIIYFIIALSCSTPKVYRQVASLMGFVLVT 262
            FKDNLV FWDNLV ECQNGPL+DQVLFDKC+ Y IIALSC+ P+VYRQVASLMG  LVT
Sbjct: 167 NFKDNLVSFWDNLVIECQNGPLFDQVLFDKCVDY-IIALSCTPPRVYRQVASLMGLQLVT 225

Query: 261 SFINVVNDLGAQRETTQRQLNAEMKKTYDGPRVESLKNRVTVTHENITMVEGMIHKIVMR 82
           SFI V   LGAQRETTQRQLNAE KK  +GPRVESL  R++ THE IT++E M+ KI   
Sbjct: 226 SFITVAKMLGAQRETTQRQLNAEKKKRTEGPRVESLNKRLSTTHEKITVIEEMMRKIFTG 285

Query: 81  LFVNSYG--YSDIRMLCIHSLDVWIQSY 4
           LFV+ Y     DIRM CI SL VWI SY
Sbjct: 286 LFVHRYRDIDQDIRMSCIQSLGVWIISY 313


>ref|XP_004165309.1| PREDICTED: cohesin subunit SA-1-like, partial [Cucumis sativus]
          Length = 1123

 Score =  280 bits (715), Expect = 4e-73
 Identities = 152/260 (58%), Positives = 183/260 (70%), Gaps = 3/260 (1%)
 Frame = -1

Query: 774 ETRPKGSNRKRVTGEASVPELEPYNTLIEVIKGDRKNIPRVVKLWVESYEKDPKPAMVEL 595
           E+RP  + R R+ G ++        +LI+VIKG+ K IP+VVK WVE YEKDPK +MVEL
Sbjct: 45  ESRPPRTKRHRLEGTSNAAHEVSEQSLIDVIKGNGKFIPQVVKRWVERYEKDPKTSMVEL 104

Query: 594 LTMLFEACGAKYRIQGEFXXXXXXXXXXXXXXXXARDGEIEDYQNFK-KEFKIFKDNLVI 418
           L  LFEACGAKY I+G+F                A+ GE+EDYQ+ K KEFK FKDNL  
Sbjct: 105 LATLFEACGAKYHIKGDFLEETDVDDVVVALVNLAKRGEVEDYQSSKRKEFKSFKDNLES 164

Query: 417 FWDNLVAECQNGPLYDQVLFDKCIIYFIIALSCSTPKVYRQVASLMGFVLVTSFINVVND 238
           FWD+LV ECQ+GPL+DQVLFDKC+ Y IIALSC+ P+VYRQVASLMG  LVTSFI V   
Sbjct: 165 FWDHLVHECQHGPLFDQVLFDKCVDY-IIALSCTPPRVYRQVASLMGLQLVTSFIGVAKM 223

Query: 237 LGAQRETTQRQLNAEMKKTYDGPRVESLKNRVTVTHENITMVEGMIHKIVMRLFVNSYGY 58
           LG QRETT+RQL+AE KK  +GP VESL  R ++THENIT++E M+ KI   LFV+ Y  
Sbjct: 224 LGVQRETTRRQLDAEKKKRVEGPLVESLNKRFSMTHENITVLEEMMRKIFTGLFVHRYRD 283

Query: 57  SD--IRMLCIHSLDVWIQSY 4
            D  IRM CI SL +WI SY
Sbjct: 284 IDPNIRMSCIQSLGIWILSY 303


>ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  280 bits (715), Expect = 4e-73
 Identities = 152/260 (58%), Positives = 183/260 (70%), Gaps = 3/260 (1%)
 Frame = -1

Query: 774  ETRPKGSNRKRVTGEASVPELEPYNTLIEVIKGDRKNIPRVVKLWVESYEKDPKPAMVEL 595
            E+RP  + R R+ G ++        +LI+VIKG+ K IP+VVK WVE YEKDPK +MVEL
Sbjct: 791  ESRPPRTKRHRLEGTSNAAHEVSEQSLIDVIKGNGKFIPQVVKRWVERYEKDPKTSMVEL 850

Query: 594  LTMLFEACGAKYRIQGEFXXXXXXXXXXXXXXXXARDGEIEDYQNFK-KEFKIFKDNLVI 418
            L  LFEACGAKY I+G+F                A+ GE+EDYQ+ K KEFK FKDNL  
Sbjct: 851  LATLFEACGAKYHIKGDFLEETDVDDVVVALVNLAKRGEVEDYQSSKRKEFKSFKDNLES 910

Query: 417  FWDNLVAECQNGPLYDQVLFDKCIIYFIIALSCSTPKVYRQVASLMGFVLVTSFINVVND 238
            FWD+LV ECQ+GPL+DQVLFDKC+ Y IIALSC+ P+VYRQVASLMG  LVTSFI V   
Sbjct: 911  FWDHLVHECQHGPLFDQVLFDKCVDY-IIALSCTPPRVYRQVASLMGLQLVTSFIGVAKM 969

Query: 237  LGAQRETTQRQLNAEMKKTYDGPRVESLKNRVTVTHENITMVEGMIHKIVMRLFVNSYGY 58
            LG QRETT+RQL+AE KK  +GP VESL  R ++THENIT++E M+ KI   LFV+ Y  
Sbjct: 970  LGVQRETTRRQLDAEKKKRVEGPLVESLNKRFSMTHENITVLEEMMRKIFTGLFVHRYRD 1029

Query: 57   SD--IRMLCIHSLDVWIQSY 4
             D  IRM CI SL +WI SY
Sbjct: 1030 IDPNIRMSCIQSLGIWILSY 1049


>ref|XP_002520706.1| stromal antigen, putative [Ricinus communis]
           gi|223540091|gb|EEF41668.1| stromal antigen, putative
           [Ricinus communis]
          Length = 1106

 Score =  278 bits (711), Expect = 1e-72
 Identities = 150/235 (63%), Positives = 173/235 (73%), Gaps = 3/235 (1%)
 Frame = -1

Query: 699 TLIEVIKGDRKNIPRVVKLWVESYEKDPKPAMVELLTMLFEACGAKYRIQGEFXXXXXXX 520
           +LIEVIKG+ KNIP+ VKLWVE YEK+ KPAMVELLTMLFEACGAK+ I+ E        
Sbjct: 69  SLIEVIKGNGKNIPQAVKLWVEEYEKNQKPAMVELLTMLFEACGAKFCIKEELLDETDVD 128

Query: 519 XXXXXXXXXARDGEIEDYQNFK-KEFKIFKDNLVIFWDNLVAECQNGPLYDQVLFDKCII 343
                    AR GE+EDYQ+ K K+ K FKDNLV FWDNLV ECQNGPL+D+VLFDKC+ 
Sbjct: 129 DVVVALVNLARKGEVEDYQSSKRKDVKNFKDNLVSFWDNLVVECQNGPLFDKVLFDKCMD 188

Query: 342 YFIIALSCSTPKVYRQVASLMGFVLVTSFINVVNDLGAQRETTQRQLNAEMKKTYDGPRV 163
           Y IIALSC+ P+VYRQ+AS +G  LVTSFI V   LGAQRETTQRQLNAE KK  DGPRV
Sbjct: 189 Y-IIALSCTPPRVYRQIASTIGLQLVTSFITVAKTLGAQRETTQRQLNAEKKKRTDGPRV 247

Query: 162 ESLKNRVTVTHENITMVEGMIHKIVMRLFVNSYGYSD--IRMLCIHSLDVWIQSY 4
           ESL  R+++THE I ++E M+ KI   LFV+ Y   D  IRM CI SL VWI SY
Sbjct: 248 ESLNKRLSMTHEKIVVLEDMMRKIFTGLFVHRYRDIDPNIRMSCIESLGVWILSY 302


Top