BLASTX nr result

ID: Cnidium21_contig00002870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002870
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307385.1| predicted protein [Populus trichocarpa] gi|2...    94   7e-17
ref|XP_002301045.1| predicted protein [Populus trichocarpa] gi|2...    91   6e-16
ref|XP_002513906.1| conserved hypothetical protein [Ricinus comm...    88   4e-15
emb|CAN67718.1| hypothetical protein VITISV_002357 [Vitis vinifera]    87   8e-15
ref|XP_002893906.1| hypothetical protein ARALYDRAFT_473703 [Arab...    83   1e-13

>ref|XP_002307385.1| predicted protein [Populus trichocarpa] gi|222856834|gb|EEE94381.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 94.0 bits (232), Expect = 7e-17
 Identities = 62/120 (51%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
 Frame = -3

Query: 822 DRPLSNSLPQLDHHQSSVSKNPKKRTRASRRAPTTVLTTDTSNFRQMVQEFTGIXXXXXX 643
           D  + +S P    H   V++NPKKRTRASRRAPTTVLTTDTSNFRQMVQEFTGI      
Sbjct: 130 DNGVRSSSPSDQTH--GVARNPKKRTRASRRAPTTVLTTDTSNFRQMVQEFTGI--PAPP 185

Query: 642 XXXXXXSRRLDLFGAAARGES-------LIYPLRPSAQKVANIQ------PSSSLYNNSM 502
                 +RRLDLFG  +   S        +YPLRPSAQKV + Q       S S +NN +
Sbjct: 186 FTGSSFTRRLDLFGPGSGLRSGHLEPIGSLYPLRPSAQKVHHQQTPLLSSSSPSFFNNDI 245


>ref|XP_002301045.1| predicted protein [Populus trichocarpa] gi|222842771|gb|EEE80318.1|
           predicted protein [Populus trichocarpa]
          Length = 423

 Score = 90.9 bits (224), Expect = 6e-16
 Identities = 58/106 (54%), Positives = 69/106 (65%), Gaps = 11/106 (10%)
 Frame = -3

Query: 786 HHQS-SVSKNPKKRTRASRRAPTTVLTTDTSNFRQMVQEFTGIXXXXXXXXXXXXSRRLD 610
           H Q+  +++NPKKRTRASRRAPTTVLTTDTSNFRQMVQEFTGI            +RRLD
Sbjct: 131 HDQTHGIARNPKKRTRASRRAPTTVLTTDTSNFRQMVQEFTGI--PAPPFSGSPFTRRLD 188

Query: 609 LFGAAARGES----LIYPLRPSAQKVANIQPS------SSLYNNSM 502
           LFG  +   S     +YPLRP+AQKV + Q         SL NN++
Sbjct: 189 LFGPGSGLRSGHLEPLYPLRPTAQKVHHQQTPFLSSSFPSLLNNNI 234


>ref|XP_002513906.1| conserved hypothetical protein [Ricinus communis]
           gi|223546992|gb|EEF48489.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 446

 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 53/97 (54%), Positives = 60/97 (61%), Gaps = 8/97 (8%)
 Frame = -3

Query: 771 VSKNPKKRTRASRRAPTTVLTTDTSNFRQMVQEFTGIXXXXXXXXXXXXSRRLDLFGAAA 592
           V++NPKKRTRASRRAPTTVLTTDTSNFR MVQEFTGI              RLDLFG+  
Sbjct: 172 VTRNPKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFSGSPYSRC-RLDLFGSVG 230

Query: 591 RG--------ESLIYPLRPSAQKVANIQPSSSLYNNS 505
            G           +YPL PSAQKV + Q   S  ++S
Sbjct: 231 SGMRSSHLEQMGSLYPLHPSAQKVQHQQSPFSFSSSS 267


>emb|CAN67718.1| hypothetical protein VITISV_002357 [Vitis vinifera]
          Length = 449

 Score = 87.0 bits (214), Expect = 8e-15
 Identities = 62/126 (49%), Positives = 74/126 (58%), Gaps = 17/126 (13%)
 Frame = -3

Query: 828 NLDRPLSNSLPQLDHHQSSVSKNPKKRTRASRRAPTTVLTTDTSNFRQMVQEFTGIXXXX 649
           N  R  S SLP     Q++V ++ KKRTRASRRAPTTVLTTDTSNFR MVQEFTGI    
Sbjct: 129 NGGRASSASLPS---DQTNVVRSSKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGI--PA 183

Query: 648 XXXXXXXXSRRLDLFGAAARGESL----------IYPLRPSAQKV-------ANIQPSSS 520
                   SRRLDLFGA   G S+          +YPLRPS  KV       ++  PS S
Sbjct: 184 PPFSASPYSRRLDLFGA---GSSIKPGHLEPLGPLYPLRPSPHKVQPNLFVSSSSSPSPS 240

Query: 519 LYNNSM 502
            +N+++
Sbjct: 241 FFNSTI 246


>ref|XP_002893906.1| hypothetical protein ARALYDRAFT_473703 [Arabidopsis lyrata subsp.
           lyrata] gi|297339748|gb|EFH70165.1| hypothetical protein
           ARALYDRAFT_473703 [Arabidopsis lyrata subsp. lyrata]
          Length = 299

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 49/88 (55%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = -3

Query: 774 SVSKNPKKRTRASRRAPTTVLTTDTSNFRQMVQEFTGIXXXXXXXXXXXXSRRLDLFGAA 595
           S S+NP+KRTRASRRAPTTVLTTDTSNFR MVQEFTG+            +RR D+F + 
Sbjct: 93  SSSRNPRKRTRASRRAPTTVLTTDTSNFRAMVQEFTGVPASPFSHPFSSTTRRFDIFRSP 152

Query: 594 ARGESLIY-PLRPSAQKVANIQPSSSLY 514
           +  + L Y P RP  QK  N  PSSS +
Sbjct: 153 S--DPLTYNPFRPIPQKPLN--PSSSFF 176


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