BLASTX nr result

ID: Cnidium21_contig00002867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002867
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ92671.1| ERD protein [Vitis amurensis]                          107   1e-21
ref|XP_003633435.1| PREDICTED: uncharacterized protein LOC100248...   106   2e-21
ref|XP_002311252.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
emb|CBI25409.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_003616732.1| Polyadenylate-binding protein-interacting pr...   102   3e-20

>gb|AFJ92671.1| ERD protein [Vitis amurensis]
          Length = 140

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 11/83 (13%)
 Frame = +3

Query: 51  MAMKVVSHNTCSFSTLNPNAPMFVPSAYRVVEDFSDQWWSLVESSPWFRDYWLTERFTDP 230
           MAM+V+S    S STLNPNAP+FVP AYR VEDFSDQWW+LV+SSPWFRDYWL E F DP
Sbjct: 1   MAMEVISRTAPSSSTLNPNAPLFVPLAYRTVEDFSDQWWALVQSSPWFRDYWLQECFQDP 60

Query: 231 Q-----------SLDEIDDLFDE 266
           +           +L +ID LFD+
Sbjct: 61  ETDPYCYDIDDPALPDIDALFDD 83


>ref|XP_003633435.1| PREDICTED: uncharacterized protein LOC100248433 [Vitis vinifera]
          Length = 140

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 11/83 (13%)
 Frame = +3

Query: 51  MAMKVVSHNTCSFSTLNPNAPMFVPSAYRVVEDFSDQWWSLVESSPWFRDYWLTERFTDP 230
           MAM+V+S    S STLNPNAP+FVP AYR VEDFSDQWW+LV+SSPWFRDYWL E F DP
Sbjct: 1   MAMEVISRTPPSSSTLNPNAPLFVPLAYRTVEDFSDQWWALVQSSPWFRDYWLQECFQDP 60

Query: 231 Q-----------SLDEIDDLFDE 266
           +           +L +ID LFD+
Sbjct: 61  ETDPYCYDIDDPALPDIDALFDD 83


>ref|XP_002311252.1| predicted protein [Populus trichocarpa] gi|222851072|gb|EEE88619.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  105 bits (262), Expect = 4e-21
 Identities = 46/69 (66%), Positives = 56/69 (81%)
 Frame = +3

Query: 57  MKVVSHNTCSFSTLNPNAPMFVPSAYRVVEDFSDQWWSLVESSPWFRDYWLTERFTDPQS 236
           M+++SH   S STLNPNAP+FVP +YR VEDFSDQWW+LV+SSPWFRDYWL ERF DP+S
Sbjct: 1   MEIMSHR--SASTLNPNAPLFVPLSYRTVEDFSDQWWALVQSSPWFRDYWLEERFYDPES 58

Query: 237 LDEIDDLFD 263
                D++D
Sbjct: 59  DPSFSDIYD 67


>emb|CBI25409.3| unnamed protein product [Vitis vinifera]
          Length = 138

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/81 (60%), Positives = 58/81 (71%), Gaps = 11/81 (13%)
 Frame = +3

Query: 57  MKVVSHNTCSFSTLNPNAPMFVPSAYRVVEDFSDQWWSLVESSPWFRDYWLTERFTDPQ- 233
           M+V+S    S STLNPNAP+FVP AYR VEDFSDQWW+LV+SSPWFRDYWL E F DP+ 
Sbjct: 1   MEVISRTPPSSSTLNPNAPLFVPLAYRTVEDFSDQWWALVQSSPWFRDYWLQECFQDPET 60

Query: 234 ----------SLDEIDDLFDE 266
                     +L +ID LFD+
Sbjct: 61  DPYCYDIDDPALPDIDALFDD 81


>ref|XP_003616732.1| Polyadenylate-binding protein-interacting protein [Medicago
           truncatula] gi|355518067|gb|AES99690.1|
           Polyadenylate-binding protein-interacting protein
           [Medicago truncatula] gi|388494142|gb|AFK35137.1|
           unknown [Medicago truncatula]
           gi|388506296|gb|AFK41214.1| unknown [Medicago
           truncatula]
          Length = 134

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
 Frame = +3

Query: 57  MKVVSHNTCSFSTLNPNAPMFVPSAYRVVEDFSDQWWSLVESSPWFRDYWLTERFTDPQS 236
           M+V+S    S S+LNPNAPMFVP AYR VEDFSD+WW+LV SSPWFRDYWL ERF DPQ+
Sbjct: 1   MEVLSATRTSSSSLNPNAPMFVPLAYRTVEDFSDEWWNLVHSSPWFRDYWLRERFQDPQN 60

Query: 237 L--DEIDD--LFDESD 272
              D   D  + DE D
Sbjct: 61  YQNDSFSDFEMMDEDD 76


Top