BLASTX nr result

ID: Cnidium21_contig00002859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002859
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533992.1| conserved hypothetical protein [Ricinus comm...    49   1e-06
ref|NP_001241562.1| uncharacterized protein LOC100816881 [Glycin...    49   2e-06
ref|XP_003628969.1| hypothetical protein MTR_8g070680 [Medicago ...    49   3e-06

>ref|XP_002533992.1| conserved hypothetical protein [Ricinus communis]
           gi|223526012|gb|EEF28389.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 23/33 (69%), Positives = 26/33 (78%)
 Frame = -3

Query: 615 VKIKKKGPRKSLYAKATDTWVDPEVAAKRLKID 517
           V+  K  P+KSLYAKATDT +DP  AAKRLKID
Sbjct: 194 VEATKTAPKKSLYAKATDTGIDPREAAKRLKID 226



 Score = 29.6 bits (65), Expect(2) = 1e-06
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 517 WDSADEIDDSDFKDERDVP 461
           WDSA EI+D D  DE +VP
Sbjct: 227 WDSAAEIEDVDSSDETEVP 245


>ref|NP_001241562.1| uncharacterized protein LOC100816881 [Glycine max]
           gi|255636679|gb|ACU18676.1| unknown [Glycine max]
          Length = 261

 Score = 48.5 bits (114), Expect(2) = 2e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -3

Query: 609 IKKKGPRKSLYAKATDTWVDPEVAAKRLKID 517
           + KK P KSLYAKATDT +DPE+AAK+L ID
Sbjct: 180 VPKKKPSKSLYAKATDTGIDPELAAKKLNID 210



 Score = 28.9 bits (63), Expect(2) = 2e-06
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = -2

Query: 517 WDSADEIDDSDFKDERDVPSL 455
           WDSA EI++++  DE +VPS+
Sbjct: 211 WDSAAEIEETNADDETEVPSV 231


>ref|XP_003628969.1| hypothetical protein MTR_8g070680 [Medicago truncatula]
           gi|355522991|gb|AET03445.1| hypothetical protein
           MTR_8g070680 [Medicago truncatula]
           gi|388514717|gb|AFK45420.1| unknown [Medicago
           truncatula]
          Length = 267

 Score = 48.5 bits (114), Expect(2) = 3e-06
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = -3

Query: 603 KKGPRKSLYAKATDTWVDPEVAAKRLKID 517
           KK P+KSLYAK TDT +DP+VAAKRL ID
Sbjct: 188 KKKPKKSLYAKTTDTGIDPQVAAKRLNID 216



 Score = 28.1 bits (61), Expect(2) = 3e-06
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 517 WDSADEIDDSDFKDERDVPSL 455
           WDSA EI+++   DE +VPS+
Sbjct: 217 WDSAAEIEEAKTDDETEVPSV 237


Top