BLASTX nr result
ID: Cnidium21_contig00002853
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00002853
(942 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316910.1| predicted protein [Populus trichocarpa] gi|2... 357 3e-96
ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein lig... 353 4e-95
emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera] 353 4e-95
ref|XP_002329104.1| predicted protein [Populus trichocarpa] gi|2... 342 1e-91
ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein lig... 339 6e-91
>ref|XP_002316910.1| predicted protein [Populus trichocarpa] gi|222859975|gb|EEE97522.1|
predicted protein [Populus trichocarpa]
Length = 478
Score = 357 bits (915), Expect = 3e-96
Identities = 185/289 (64%), Positives = 208/289 (71%)
Frame = +2
Query: 68 MGDKFRPISLEDLPLHLILEILTSGPLRAVDLVSLEXXXXXXXXXXXXXXXXXXXXTSRT 247
M DK R +S+EDLP HLI EILT+G L AVDL LE TSRT
Sbjct: 1 MADKNRSVSIEDLPSHLIFEILTTGRLSAVDLACLEL-------------------TSRT 41
Query: 248 FRANARLDTRFQSNSSLVNFAAFQLCWSHPLYSSMHLEERKALFDKTEGNWKRVLRFLQS 427
F + L Q SLV+FAA+QLC SH +YS M +K LF + EGNWKRVLRFLQ+
Sbjct: 42 FGGSHGLYP--QKFRSLVDFAAYQLCVSHRVYSGMGWNAQKGLFGRCEGNWKRVLRFLQA 99
Query: 428 VDQSSDMVETSAGNMQIKSGRYHTXXXXXXXXXXXXXXXXXXLGHGSETTQCVAFTRIRF 607
V++SS MV+TSA NMQ+ +GRYHT LGHG+ETTQCVAFTRIRF
Sbjct: 100 VEESSGMVKTSASNMQVTTGRYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRF 159
Query: 608 PSLAQVTQVSASHNHAAFVMQTGEVFTCGDNSSFCCGHGDTNRPIFRPRLVETLKGVPCK 787
PSLA V QVSASHNHAAFV+Q+GEVFTCGDNSSFCCGH DTNRPIFRPRLVE LKGVPCK
Sbjct: 160 PSLAYVIQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCK 219
Query: 788 QVAAGSSFTVFLTSQGNVYTCGTNSHGQLGHGDTLDRPTPKVVELLESV 934
QVA G +FTVFLT QG +YTCGTN+HGQLGHGDT DRPTPK++ELLE V
Sbjct: 220 QVAVGLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGV 268
Score = 73.2 bits (178), Expect = 9e-11
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Frame = +2
Query: 554 LGHGSETTQCVAFTRIRFPSLAQVTQVSASHNHAAFVMQTGEVFTCGDNSSFCCGHGDTN 733
LGHG + + V Q++A ++ V G V++ G S+ C GHG+ +
Sbjct: 248 LGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNLCLGHGEQH 307
Query: 734 RPIFRPRLVETL--KGVPCKQVAAGSSFTVFLTSQGNVYTCGTNSHGQLGHGDTLDRPTP 907
FRPR ++T K + V+AG V L S G VY+ G G LGHGD +D+ P
Sbjct: 308 DE-FRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLP 366
Query: 908 KVVELLES 931
+V L+S
Sbjct: 367 ALVNCLKS 374
>ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
vinifera] gi|302143037|emb|CBI20332.3| unnamed protein
product [Vitis vinifera]
Length = 492
Score = 353 bits (905), Expect = 4e-95
Identities = 187/290 (64%), Positives = 213/290 (73%), Gaps = 1/290 (0%)
Frame = +2
Query: 68 MGDKFRPISLEDLPLHLILEILTSGPLRAVDLVSLEXXXXXXXXXXXXXXXXXXXXTSRT 247
M +++ +S E+LP HLILEIL+SG L AVDLV LE TSRT
Sbjct: 1 MANRYWSVSFEELPSHLILEILSSGRLSAVDLVCLEL-------------------TSRT 41
Query: 248 FRANARL-DTRFQSNSSLVNFAAFQLCWSHPLYSSMHLEERKALFDKTEGNWKRVLRFLQ 424
F A+ L +F+S LV+FAAFQLC SHP+Y+++ L +K LFD+ NWKRVLRFLQ
Sbjct: 42 FGASHGLYPHKFRS---LVDFAAFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQ 98
Query: 425 SVDQSSDMVETSAGNMQIKSGRYHTXXXXXXXXXXXXXXXXXXLGHGSETTQCVAFTRIR 604
SV+QSS + ETSAGNMQI +GRYHT LGHG ETTQCVAF+RI
Sbjct: 99 SVEQSSYISETSAGNMQITTGRYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRIN 158
Query: 605 FPSLAQVTQVSASHNHAAFVMQTGEVFTCGDNSSFCCGHGDTNRPIFRPRLVETLKGVPC 784
FP LA V QVSASHNHAAFVMQ+GEVFTCGDNSSFCCGHGDT RPIFRPRLVE LKGVPC
Sbjct: 159 FPPLAHVAQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPC 218
Query: 785 KQVAAGSSFTVFLTSQGNVYTCGTNSHGQLGHGDTLDRPTPKVVELLESV 934
KQVAAG SFTVFLT +G+VYTCGTN+HGQLGHGDT+DR TPK+VELLE V
Sbjct: 219 KQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGV 268
Score = 76.6 bits (187), Expect = 8e-12
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Frame = +2
Query: 554 LGHGSETTQCVAFTRIRFPSLAQVTQVSASHNHAAFVMQTGEVFTCGDNSSFCCGHGDTN 733
LGHG + + V Q++A ++A V G V + G S+FC GHG+ +
Sbjct: 248 LGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQH 307
Query: 734 RPIFRPRLVETL--KGVPCKQVAAGSSFTVFLTSQGNVYTCGTNSHGQLGHGDTLDRPTP 907
+ RPR +++ K + +++AG V L S G VYT G G LGHGD +D+ TP
Sbjct: 308 NEL-RPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTP 366
Query: 908 KVVELLES 931
+++ L+S
Sbjct: 367 EILSSLKS 374
>emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
Length = 511
Score = 353 bits (905), Expect = 4e-95
Identities = 187/290 (64%), Positives = 213/290 (73%), Gaps = 1/290 (0%)
Frame = +2
Query: 68 MGDKFRPISLEDLPLHLILEILTSGPLRAVDLVSLEXXXXXXXXXXXXXXXXXXXXTSRT 247
M +++ +S E+LP HLILEIL+SG L AVDLV LE TSRT
Sbjct: 1 MANRYWSVSFEELPSHLILEILSSGRLSAVDLVCLEL-------------------TSRT 41
Query: 248 FRANARL-DTRFQSNSSLVNFAAFQLCWSHPLYSSMHLEERKALFDKTEGNWKRVLRFLQ 424
F A+ L +F+S LV+FAAFQLC SHP+Y+++ L +K LFD+ NWKRVLRFLQ
Sbjct: 42 FGASHGLYPHKFRS---LVDFAAFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQ 98
Query: 425 SVDQSSDMVETSAGNMQIKSGRYHTXXXXXXXXXXXXXXXXXXLGHGSETTQCVAFTRIR 604
SV+QSS + ETSAGNMQI +GRYHT LGHG ETTQCVAF+RI
Sbjct: 99 SVEQSSYISETSAGNMQITTGRYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRIN 158
Query: 605 FPSLAQVTQVSASHNHAAFVMQTGEVFTCGDNSSFCCGHGDTNRPIFRPRLVETLKGVPC 784
FP LA V QVSASHNHAAFVMQ+GEVFTCGDNSSFCCGHGDT RPIFRPRLVE LKGVPC
Sbjct: 159 FPPLAHVAQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPC 218
Query: 785 KQVAAGSSFTVFLTSQGNVYTCGTNSHGQLGHGDTLDRPTPKVVELLESV 934
KQVAAG SFTVFLT +G+VYTCGTN+HGQLGHGDT+DR TPK+VELLE V
Sbjct: 219 KQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGV 268
Score = 76.6 bits (187), Expect = 8e-12
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Frame = +2
Query: 554 LGHGSETTQCVAFTRIRFPSLAQVTQVSASHNHAAFVMQTGEVFTCGDNSSFCCGHGDTN 733
LGHG + + V Q++A ++A V G V + G S+FC GHG+ +
Sbjct: 248 LGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQH 307
Query: 734 RPIFRPRLVETL--KGVPCKQVAAGSSFTVFLTSQGNVYTCGTNSHGQLGHGDTLDRPTP 907
+ RPR +++ K + +++AG V L S G VYT G G LGHGD +D+ TP
Sbjct: 308 NEL-RPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTP 366
Query: 908 KVVELLES 931
+++ L+S
Sbjct: 367 EILSSLKS 374
>ref|XP_002329104.1| predicted protein [Populus trichocarpa] gi|222869773|gb|EEF06904.1|
predicted protein [Populus trichocarpa]
Length = 492
Score = 342 bits (876), Expect = 1e-91
Identities = 178/289 (61%), Positives = 204/289 (70%)
Frame = +2
Query: 68 MGDKFRPISLEDLPLHLILEILTSGPLRAVDLVSLEXXXXXXXXXXXXXXXXXXXXTSRT 247
M +++R S+ED P HLI EILT G L A DLV LE TSRT
Sbjct: 1 MANRYRLASIEDFPSHLIFEILTIGRLSAADLVCLEL-------------------TSRT 41
Query: 248 FRANARLDTRFQSNSSLVNFAAFQLCWSHPLYSSMHLEERKALFDKTEGNWKRVLRFLQS 427
F A+ L Q SLV+FAA QLC SH +Y M +K LFD+ GNWKRVLRFLQ+
Sbjct: 42 FGASHGLYP--QKFRSLVDFAAHQLCVSHRVYGGMGWNAQKELFDRCGGNWKRVLRFLQA 99
Query: 428 VDQSSDMVETSAGNMQIKSGRYHTXXXXXXXXXXXXXXXXXXLGHGSETTQCVAFTRIRF 607
V++SS MV+TSA NMQ+ +GRYHT LGHG+ETTQCVAFTRIRF
Sbjct: 100 VEESSGMVKTSACNMQVTTGRYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRF 159
Query: 608 PSLAQVTQVSASHNHAAFVMQTGEVFTCGDNSSFCCGHGDTNRPIFRPRLVETLKGVPCK 787
PSLA V QVSASHNHAAFV+Q+GEVFTCGDNSSFCCGH DTNRPIFRPRLVE LK V CK
Sbjct: 160 PSLANVVQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCK 219
Query: 788 QVAAGSSFTVFLTSQGNVYTCGTNSHGQLGHGDTLDRPTPKVVELLESV 934
QV+ G +FTVFLT QG +YTCG+N+HGQLGHGDTLDRPTPK++ELLE +
Sbjct: 220 QVSVGLNFTVFLTRQGQLYTCGSNTHGQLGHGDTLDRPTPKIIELLEGI 268
Score = 73.2 bits (178), Expect = 9e-11
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Frame = +2
Query: 554 LGHGSETTQCVAFTRIRFPSLAQVTQVSASHNHAAFVMQTGEVFTCGDNSSFCCGHGDTN 733
LGHG + + V Q++A ++ V G V++ G S+FC GHG+ +
Sbjct: 248 LGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNFCLGHGEQH 307
Query: 734 RPIFRPRLVETL--KGVPCKQVAAGSSFTVFLTSQGNVYTCGTNSHGQLGHGDTLDRPTP 907
F+PR ++T K + V+AG V L S G VY+ G G LGHGD +D+ P
Sbjct: 308 DE-FQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLP 366
Query: 908 KVVELLES 931
+V L+S
Sbjct: 367 SLVNCLKS 374
>ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 485
Score = 339 bits (869), Expect = 6e-91
Identities = 179/291 (61%), Positives = 209/291 (71%), Gaps = 1/291 (0%)
Frame = +2
Query: 68 MGDKFRPISLEDLPLHLILEILTSGPLRAVDLVSLEXXXXXXXXXXXXXXXXXXXXTSRT 247
MG++ R S+E+LP HL+LEIL SG L A+DLV LE TS+T
Sbjct: 1 MGERCRHFSIEELPSHLVLEILCSGRLSAMDLVCLEL-------------------TSKT 41
Query: 248 FRANARLDT-RFQSNSSLVNFAAFQLCWSHPLYSSMHLEERKALFDKTEGNWKRVLRFLQ 424
F + L +F+S LV FAAFQLC SH Y+ M L ++ L+D+ GNWKRVLRFLQ
Sbjct: 42 FGGSHGLHPFKFKS---LVAFAAFQLCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQ 98
Query: 425 SVDQSSDMVETSAGNMQIKSGRYHTXXXXXXXXXXXXXXXXXXLGHGSETTQCVAFTRIR 604
SV+QSS MVETS+GNMQI +G+YHT LG GSETTQCVAFTRI
Sbjct: 99 SVEQSSQMVETSSGNMQITTGKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRID 158
Query: 605 FPSLAQVTQVSASHNHAAFVMQTGEVFTCGDNSSFCCGHGDTNRPIFRPRLVETLKGVPC 784
FP LA+V VSAS NHAAFVMQ+GEVFTCGDNSS CCGH DT RPIFRPRLVE+LKG+PC
Sbjct: 159 FPPLARVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPC 218
Query: 785 KQVAAGSSFTVFLTSQGNVYTCGTNSHGQLGHGDTLDRPTPKVVELLESVV 937
KQVAAG +FTVFLT +G+VYTCGTN+HGQLGHGDT DRPTPK++E+L SVV
Sbjct: 219 KQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSVV 269
Score = 73.2 bits (178), Expect = 9e-11
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Frame = +2
Query: 554 LGHGSETTQCVAFTRIRFPSLAQVTQVSASHNHAAFVMQTGEVFTCGDNSSFCCGHGDTN 733
LGHG + T L+ V Q++A ++ V + G V++ G ++FC GHG+ +
Sbjct: 248 LGHGDTQDRP---TPKMIEVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQH 304
Query: 734 RPIFRPRLVETL--KGVPCKQVAAGSSFTVFLTSQGNVYTCGTNSHGQLGHGDTLDRPTP 907
+ +PR ++ KG+ +V+AG V L S G VYT G G LGHGD +++ TP
Sbjct: 305 DEL-QPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTP 363
Query: 908 KVVELLES 931
+++ L++
Sbjct: 364 ELLTSLKN 371