BLASTX nr result
ID: Cnidium21_contig00002844
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00002844
(783 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [V... 316 3e-84
emb|CBI34473.3| unnamed protein product [Vitis vinifera] 316 3e-84
ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [G... 295 8e-78
ref|XP_003545171.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase ... 292 5e-77
ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [C... 290 3e-76
>ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [Vitis vinifera]
Length = 457
Score = 316 bits (810), Expect = 3e-84
Identities = 157/204 (76%), Positives = 174/204 (85%), Gaps = 3/204 (1%)
Frame = +1
Query: 4 VLKDFFERKXXXXXXXXX-EERYEKILDMIPDEGITSELRGKWQDNRRSSMAKEDINVFR 180
VLKDFFE K EERYEKIL +IPDE ITSELRGKWQ+NRRSS++KEDIN R
Sbjct: 254 VLKDFFEEKLLPGQKLFSTEERYEKILKIIPDESITSELRGKWQENRRSSISKEDINAIR 313
Query: 181 WDQLKHLLQSGKQKAPGLRRCVEEIVFSYAYPRIDMEVSKHMNHLLKAPFCVHPKTGRVC 360
W+QLKH+LQSGKQKA GLRRCVEEIVFSY YPR+DMEVSKHMNHLLKAPFCVHPKTGRVC
Sbjct: 314 WEQLKHMLQSGKQKAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVC 373
Query: 361 VPIDPDRCEEFDPTTVPTLSKLLGEINM-GLRTEG-DEWDATSLGQSVRYFRSSFLQPLL 534
VPIDP CEEFDPT+VPTLSKLL E+NM G R + DEW+ TSLG+SV++FR SFLQPLL
Sbjct: 374 VPIDPKSCEEFDPTSVPTLSKLLEELNMGGFRADADDEWERTSLGKSVKFFRLSFLQPLL 433
Query: 535 KSCKEEIESSYIAKKEQSRNSLSW 606
KSCKEEIES+Y AK + S+NSLSW
Sbjct: 434 KSCKEEIESAYNAKLQLSKNSLSW 457
>emb|CBI34473.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 316 bits (810), Expect = 3e-84
Identities = 157/204 (76%), Positives = 174/204 (85%), Gaps = 3/204 (1%)
Frame = +1
Query: 4 VLKDFFERKXXXXXXXXX-EERYEKILDMIPDEGITSELRGKWQDNRRSSMAKEDINVFR 180
VLKDFFE K EERYEKIL +IPDE ITSELRGKWQ+NRRSS++KEDIN R
Sbjct: 244 VLKDFFEEKLLPGQKLFSTEERYEKILKIIPDESITSELRGKWQENRRSSISKEDINAIR 303
Query: 181 WDQLKHLLQSGKQKAPGLRRCVEEIVFSYAYPRIDMEVSKHMNHLLKAPFCVHPKTGRVC 360
W+QLKH+LQSGKQKA GLRRCVEEIVFSY YPR+DMEVSKHMNHLLKAPFCVHPKTGRVC
Sbjct: 304 WEQLKHMLQSGKQKAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVC 363
Query: 361 VPIDPDRCEEFDPTTVPTLSKLLGEINM-GLRTEG-DEWDATSLGQSVRYFRSSFLQPLL 534
VPIDP CEEFDPT+VPTLSKLL E+NM G R + DEW+ TSLG+SV++FR SFLQPLL
Sbjct: 364 VPIDPKSCEEFDPTSVPTLSKLLEELNMGGFRADADDEWERTSLGKSVKFFRLSFLQPLL 423
Query: 535 KSCKEEIESSYIAKKEQSRNSLSW 606
KSCKEEIES+Y AK + S+NSLSW
Sbjct: 424 KSCKEEIESAYNAKLQLSKNSLSW 447
>ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [Glycine max]
Length = 434
Score = 295 bits (755), Expect = 8e-78
Identities = 147/205 (71%), Positives = 167/205 (81%), Gaps = 3/205 (1%)
Frame = +1
Query: 1 NVLKDFFERKXXXXXXXXX-EERYEKILDMIPDEGITSELRGKWQDNRRSSMAKEDINVF 177
NVLK++FE+ EERYEKILDMIPDE I SELRG+WQD+RRSS AKEDINV
Sbjct: 230 NVLKNYFEKNLLTGQNLLATEERYEKILDMIPDESIASELRGRWQDSRRSSSAKEDINVV 289
Query: 178 RWDQLKHLLQSGKQKAPGLRRCVEEIVFSYAYPRIDMEVSKHMNHLLKAPFCVHPKTGRV 357
RW+Q K LLQSGK KA GLRRC+EEIVF + YPR+DMEVSKHMNHLLKAPFCVHPKTGRV
Sbjct: 290 RWEQCKQLLQSGKHKAQGLRRCIEEIVFCFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRV 349
Query: 358 CVPIDPDRCEEFDPTTVPTLSKLLGEINM-GLRTEGD-EWDATSLGQSVRYFRSSFLQPL 531
CVPIDP RCEEFDPTTVPTLS+L+ E+N G R + D E + TSLG ++ FRSSFLQPL
Sbjct: 350 CVPIDPKRCEEFDPTTVPTLSQLIEELNYEGSRADADGESNRTSLGNAITLFRSSFLQPL 409
Query: 532 LKSCKEEIESSYIAKKEQSRNSLSW 606
LK+CKEEIE+SY K +QS+NSL W
Sbjct: 410 LKACKEEIENSYNLKLQQSKNSLGW 434
>ref|XP_003545171.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase small subunit-like
[Glycine max]
Length = 435
Score = 292 bits (748), Expect = 5e-77
Identities = 145/206 (70%), Positives = 167/206 (81%), Gaps = 4/206 (1%)
Frame = +1
Query: 1 NVLKDFFERKXXXXXXXXX-EERYEKILDMIPDEGITSELRGKWQDNRRSSMAKEDINVF 177
NVLKD+FE+ EERYEKIL MIPDE I SELRG+WQD+RRSS AKEDINV
Sbjct: 230 NVLKDYFEKNLLTGQNLLATEERYEKILGMIPDESIASELRGRWQDSRRSSSAKEDINVV 289
Query: 178 RWDQLKHLLQSGKQKAPGLRRCVEEIVFSYAYPRIDMEVSKHMNHLLKAPFCVHPKTGRV 357
RW+Q K LLQSGK KA GLRRC+EEIVF + YPR+DMEVSKHMNHLLKAPFCVHPKTGRV
Sbjct: 290 RWEQCKQLLQSGKHKAQGLRRCIEEIVFCFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRV 349
Query: 358 CVPIDPDRCEEFDPTTVPTLSKLLGEINM-GLR--TEGDEWDATSLGQSVRYFRSSFLQP 528
CVPIDP RCEEFDPTTVPTLS+L+ E+N G R +G E++ T+LG ++ FR SFLQP
Sbjct: 350 CVPIDPKRCEEFDPTTVPTLSQLIEELNYEGSRADVDGAEFNRTTLGNAITLFRLSFLQP 409
Query: 529 LLKSCKEEIESSYIAKKEQSRNSLSW 606
LLK+CKEEIE+SY K +QS+NSL+W
Sbjct: 410 LLKACKEEIENSYYLKLQQSKNSLAW 435
>ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [Cucumis sativus]
gi|449517297|ref|XP_004165682.1| PREDICTED: DNA primase
small subunit-like [Cucumis sativus]
Length = 450
Score = 290 bits (741), Expect = 3e-76
Identities = 145/205 (70%), Positives = 169/205 (82%), Gaps = 4/205 (1%)
Frame = +1
Query: 4 VLKDFFERKXXXXXXXXX-EERYEKILDMIPDEGITSELRGKWQDNRRSSMAKEDINVFR 180
VLKD FE + EERYEKILDMIPDE ITS+LRG+WQDNRRSS K D+N R
Sbjct: 249 VLKDSFESQLLCSQKIFSTEERYEKILDMIPDESITSDLRGRWQDNRRSS--KNDVNSLR 306
Query: 181 WDQLKHLLQSGKQKAPGLRRCVEEIVFSYAYPRIDMEVSKHMNHLLKAPFCVHPKTGRVC 360
W+QLK LLQSGK KA G+RR VEEIVFS+ YPR+D EV+KHMNHLLKAPFCVHPKTGR+C
Sbjct: 307 WEQLKSLLQSGKHKAQGMRRHVEEIVFSFTYPRLDSEVTKHMNHLLKAPFCVHPKTGRIC 366
Query: 361 VPIDPDRCEEFDPTTVPTLSKLLGEIN---MGLRTEGDEWDATSLGQSVRYFRSSFLQPL 531
VPIDP+ C+EFDPTTVPT+++LL E+N M + +E D WD TSLG+S+R+FRS+FLQPL
Sbjct: 367 VPIDPEHCDEFDPTTVPTVAQLLEELNAADMEVDSEND-WDRTSLGESIRFFRSAFLQPL 425
Query: 532 LKSCKEEIESSYIAKKEQSRNSLSW 606
LKSCKEEIESSY AK +QS+NSLSW
Sbjct: 426 LKSCKEEIESSYNAKVQQSKNSLSW 450