BLASTX nr result

ID: Cnidium21_contig00002808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002808
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF44083.1| phytochrome b [Lotus japonicus]                       119   2e-25
sp|P42499.1|PHYB_SOYBN RecName: Full=Phytochrome B gi|516103|gb|...   119   3e-25
gb|AEA41043.1| phytochrome B [Amphicarpaea edgeworthii]               119   3e-25
ref|NP_001240097.1| phytochrome B-like [Glycine max] gi|31223179...   119   3e-25
gb|ACE79200.1| phytochrome B-3 [Glycine max]                          119   3e-25

>dbj|BAF44083.1| phytochrome b [Lotus japonicus]
          Length = 1143

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/72 (76%), Positives = 66/72 (91%)
 Frame = +1

Query: 1    RIVCPGEGLPSELIQDMFNSSTWVTQEGLGLSMSRKILKLMDGDVQYIREAERCYFHIII 180
            R+VCPGEGLPSEL+QDMF++S WVTQEGLGL MSRKILKLM+G+VQYIREAERCYF +++
Sbjct: 1071 RLVCPGEGLPSELVQDMFHNSRWVTQEGLGLCMSRKILKLMNGEVQYIREAERCYFFVLL 1130

Query: 181  ELPVSQDSSGNV 216
            ELPV++ SS  V
Sbjct: 1131 ELPVTRRSSKGV 1142


>sp|P42499.1|PHYB_SOYBN RecName: Full=Phytochrome B gi|516103|gb|AAA34000.1| phytochrome B
            [Glycine max]
          Length = 1156

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/69 (79%), Positives = 65/69 (94%)
 Frame = +1

Query: 1    RIVCPGEGLPSELIQDMFNSSTWVTQEGLGLSMSRKILKLMDGDVQYIREAERCYFHIII 180
            R+VCPGEGLP ELIQDMFN+S W TQEGLGLSMSRKILKLM+G+VQYIREAERCYF++++
Sbjct: 1085 RMVCPGEGLPPELIQDMFNNSRWGTQEGLGLSMSRKILKLMNGEVQYIREAERCYFYVLL 1144

Query: 181  ELPVSQDSS 207
            ELPV++ SS
Sbjct: 1145 ELPVTRRSS 1153


>gb|AEA41043.1| phytochrome B [Amphicarpaea edgeworthii]
          Length = 1105

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/69 (79%), Positives = 65/69 (94%)
 Frame = +1

Query: 1    RIVCPGEGLPSELIQDMFNSSTWVTQEGLGLSMSRKILKLMDGDVQYIREAERCYFHIII 180
            R+VCPGEGLP ELIQDMFN+S W TQEGLGLSMSRKILKLM+G+VQYIREAERCYF++++
Sbjct: 1034 RMVCPGEGLPPELIQDMFNNSRWGTQEGLGLSMSRKILKLMNGEVQYIREAERCYFYVLL 1093

Query: 181  ELPVSQDSS 207
            ELPV++ SS
Sbjct: 1094 ELPVTRRSS 1102


>ref|NP_001240097.1| phytochrome B-like [Glycine max] gi|312231793|gb|ACE79198.2|
            phytochrome B-1 [Glycine max]
          Length = 1137

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/69 (79%), Positives = 65/69 (94%)
 Frame = +1

Query: 1    RIVCPGEGLPSELIQDMFNSSTWVTQEGLGLSMSRKILKLMDGDVQYIREAERCYFHIII 180
            R+VCPGEGLP ELIQDMFN+S W TQEGLGLSMSRKILKLM+G+VQYIREAERCYF++++
Sbjct: 1066 RMVCPGEGLPPELIQDMFNNSRWGTQEGLGLSMSRKILKLMNGEVQYIREAERCYFYVLL 1125

Query: 181  ELPVSQDSS 207
            ELPV++ SS
Sbjct: 1126 ELPVTRRSS 1134


>gb|ACE79200.1| phytochrome B-3 [Glycine max]
          Length = 1100

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/69 (79%), Positives = 65/69 (94%)
 Frame = +1

Query: 1    RIVCPGEGLPSELIQDMFNSSTWVTQEGLGLSMSRKILKLMDGDVQYIREAERCYFHIII 180
            R+VCPGEGLP ELIQDMFN+S W TQEGLGLSMSRKILKLM+G+VQYIREAERCYF++++
Sbjct: 1029 RMVCPGEGLPPELIQDMFNNSRWGTQEGLGLSMSRKILKLMNGEVQYIREAERCYFYVLL 1088

Query: 181  ELPVSQDSS 207
            ELPV++ SS
Sbjct: 1089 ELPVTRRSS 1097


Top