BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002800
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP49327.1| H/ACA ribonucleoprotein complex subunit, partial ...   159   4e-37
ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|1...   156   4e-36
ref|XP_002269703.1| PREDICTED: H/ACA ribonucleoprotein complex s...   154   1e-35
gb|AFK48249.1| unknown [Lotus japonicus]                              152   4e-35
gb|AFK39165.1| unknown [Lotus japonicus]                              152   4e-35

>gb|AFP49327.1| H/ACA ribonucleoprotein complex subunit, partial [Olea europaea]
          Length = 92

 Score =  159 bits (402), Expect = 4e-37
 Identities = 80/112 (71%), Positives = 88/112 (78%)
 Frame = -1

Query: 638 GNKGLCIIAGNISPIDVITHVPVLCEEADIPYIYVNSKEELANAXXXXXXXXXXXXXXXX 459
           GNKGLC+IAGNISPIDVITHVP+LCEEADIPYIYV SKE+LANA                
Sbjct: 1   GNKGLCVIAGNISPIDVITHVPILCEEADIPYIYVPSKEDLANA---------------- 44

Query: 458 XXXXGSTKRPTCCVLVLTKPTKGELAQDEQEKLKSDYDQVVSDVSELAGTLF 303
               G+TKRPTCCVLVLTKPTKGE+AQDEQEKLK DYDQV S+VSELA ++F
Sbjct: 45  ----GATKRPTCCVLVLTKPTKGEIAQDEQEKLKGDYDQVASEVSELANSMF 92


>ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|118483385|gb|ABK93593.1|
           unknown [Populus trichocarpa]
           gi|118485555|gb|ABK94629.1| unknown [Populus
           trichocarpa] gi|222851227|gb|EEE88774.1| predicted
           protein [Populus trichocarpa]
          Length = 155

 Score =  156 bits (394), Expect = 4e-36
 Identities = 77/115 (66%), Positives = 91/115 (79%)
 Frame = -1

Query: 647 IRKGNKGLCIIAGNISPIDVITHVPVLCEEADIPYIYVNSKEELANAXXXXXXXXXXXXX 468
           IR+G+KGLCIIAGNISPIDVITHVP+LCEE+DIPY+YV SKE+LA+A             
Sbjct: 61  IRRGHKGLCIIAGNISPIDVITHVPILCEESDIPYVYVTSKEDLASA------------- 107

Query: 467 XXXXXXXGSTKRPTCCVLVLTKPTKGELAQDEQEKLKSDYDQVVSDVSELAGTLF 303
                  G+TKRPTCCVLVLTKPTKGE+ +++QEKLK+DYDQVVSDVSEL  +LF
Sbjct: 108 -------GATKRPTCCVLVLTKPTKGEIGKEDQEKLKADYDQVVSDVSELTSSLF 155


>ref|XP_002269703.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein
           [Vitis vinifera] gi|147867156|emb|CAN80504.1|
           hypothetical protein VITISV_035185 [Vitis vinifera]
           gi|297734127|emb|CBI15374.3| unnamed protein product
           [Vitis vinifera]
          Length = 157

 Score =  154 bits (390), Expect = 1e-35
 Identities = 78/115 (67%), Positives = 88/115 (76%)
 Frame = -1

Query: 647 IRKGNKGLCIIAGNISPIDVITHVPVLCEEADIPYIYVNSKEELANAXXXXXXXXXXXXX 468
           IR+G+KG C+IAGNI+PIDVITHVP+LCEEADIPY+YV SKE+LANA             
Sbjct: 63  IRRGDKGFCVIAGNITPIDVITHVPILCEEADIPYVYVPSKEDLANA------------- 109

Query: 467 XXXXXXXGSTKRPTCCVLVLTKPTKGELAQDEQEKLKSDYDQVVSDVSELAGTLF 303
                  GSTKRPTCCVLVLTKPTKGEL Q+EQEKLK++Y QVVSDVS L  TLF
Sbjct: 110 -------GSTKRPTCCVLVLTKPTKGELGQEEQEKLKAEYTQVVSDVSGLTSTLF 157


>gb|AFK48249.1| unknown [Lotus japonicus]
          Length = 157

 Score =  152 bits (385), Expect = 4e-35
 Identities = 75/115 (65%), Positives = 89/115 (77%)
 Frame = -1

Query: 647 IRKGNKGLCIIAGNISPIDVITHVPVLCEEADIPYIYVNSKEELANAXXXXXXXXXXXXX 468
           IR+G+KGLC+IAGNISPIDVITHVPVLCEE+D+PY+YV SKE+LA+A             
Sbjct: 63  IRRGHKGLCVIAGNISPIDVITHVPVLCEESDVPYVYVTSKEDLASA------------- 109

Query: 467 XXXXXXXGSTKRPTCCVLVLTKPTKGELAQDEQEKLKSDYDQVVSDVSELAGTLF 303
                  G+TKRPTCCVLVLTKP KGE+ + EQEKLKSDYDQVVSDV+E+  +LF
Sbjct: 110 -------GATKRPTCCVLVLTKPAKGEMEKGEQEKLKSDYDQVVSDVTEITASLF 157


>gb|AFK39165.1| unknown [Lotus japonicus]
          Length = 157

 Score =  152 bits (385), Expect = 4e-35
 Identities = 75/115 (65%), Positives = 89/115 (77%)
 Frame = -1

Query: 647 IRKGNKGLCIIAGNISPIDVITHVPVLCEEADIPYIYVNSKEELANAXXXXXXXXXXXXX 468
           IR+G+KGLC+IAGNISPIDVITHVPVLCEE+D+PY+YV SKE+LA+A             
Sbjct: 63  IRRGHKGLCVIAGNISPIDVITHVPVLCEESDVPYVYVTSKEDLASA------------- 109

Query: 467 XXXXXXXGSTKRPTCCVLVLTKPTKGELAQDEQEKLKSDYDQVVSDVSELAGTLF 303
                  G+TKRPTCCVLVLTKP KGE+ + EQEKLKSDYDQVVSDV+E+  +LF
Sbjct: 110 -------GATKRPTCCVLVLTKPAKGEMEKGEQEKLKSDYDQVVSDVTEITASLF 157