BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002799
         (1395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523323.1| PREDICTED: uncharacterized protein LOC100787...   379   e-102
ref|NP_192799.1| CTC-interacting domain 12 protein [Arabidopsis ...   372   e-101
ref|XP_002872527.1| RNA-binding protein 37 [Arabidopsis lyrata s...   372   e-100
ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800...   370   e-100
ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245...   369   1e-99

>ref|XP_003523323.1| PREDICTED: uncharacterized protein LOC100787572 [Glycine max]
          Length = 369

 Score =  379 bits (972), Expect = e-102
 Identities = 213/380 (56%), Positives = 252/380 (66%), Gaps = 10/380 (2%)
 Frame = -3

Query: 1327 MAVVEN-------GELNVNNSMNQTESLKISEPKSK---NFQMGVKNELKKMNGSDQMSL 1178
            MAV EN          ++ N +   +S ++ + K+K   N   GV N  +++ G+     
Sbjct: 1    MAVAENVGAKIGSSSQSLENGLVSADSGEVEKSKTKGDQNLNNGVFNHQERVPGT----- 55

Query: 1177 VKLQNGNGVKSHEMNGQXXXXXXXXXXXXXXXXXXGEGFKKEMRDLEEMLSKLNPMAKEF 998
            + + NGN     +M+                    GE FK++MRDLEE+LSKLNPMA+EF
Sbjct: 56   MPVPNGNFSYKAQMHANGVNNDGYGMNGVTSGENGGESFKRDMRDLEELLSKLNPMAEEF 115

Query: 997  VPPSITGFRPVLQPPQFGYIADGNFVVHTNSPVATGGNIARRKKTGYSHGKRRMNSRTSM 818
            VPPS+      L  P  G+    N ++ TN     G    RR+K GY+ GKRRMN++  M
Sbjct: 116  VPPSLANTHGFLAGPNAGFGYTNNIILPTNYGNTNGQTNNRRRKNGYNPGKRRMNNKMDM 175

Query: 817  AQREEVIRRTVYVSDIDHQVTEEHLAALFISCGQVVDCRVCGDPNSILRFAFVEFTDEDG 638
             +REE+IRRTVYVSDID  VTEE LAALF++CGQVVDCRVCGDPNSILRFAFVEFTDE+G
Sbjct: 176  EKREEMIRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNSILRFAFVEFTDEEG 235

Query: 637  ARNALSLEGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKITQA 458
            AR ALSL GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMC+RTIYCTNIDKK+TQA
Sbjct: 236  ARAALSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQA 295

Query: 457  DVKLFFEXXXXXXXXXXXXXXXXXXXXXXXTRIAFVEFVMAESAIAALNCSGVFLGSLPI 278
            DVK FFE                       TRIAFVEF +AESAIAAL+CSGV LGSLPI
Sbjct: 296  DVKHFFE-----SICGEVHRLRLLGDYHHSTRIAFVEFALAESAIAALSCSGVILGSLPI 350

Query: 277  RVSPSKTPVRQQRVPRSAMH 218
            RVSPSKTPVR  R PR  MH
Sbjct: 351  RVSPSKTPVR-PRAPRPPMH 369


>ref|NP_192799.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
            gi|4115925|gb|AAD03436.1| contains similarity to RNA
            recognition motifs (Pfam: PF00076, Score=5.5e-23, N=2)
            [Arabidopsis thaliana] gi|4539439|emb|CAB40027.1|
            RNA-binding protein [Arabidopsis thaliana]
            gi|4959384|gb|AAD34325.1| RNA-binding protein
            [Arabidopsis thaliana] gi|7267758|emb|CAB78184.1|
            RNA-binding protein [Arabidopsis thaliana]
            gi|14517528|gb|AAK62654.1| AT4g10610/T4F9_70 [Arabidopsis
            thaliana] gi|18700204|gb|AAL77712.1| AT4g10610/T4F9_70
            [Arabidopsis thaliana] gi|21592407|gb|AAM64358.1|
            RNA-binding protein [Arabidopsis thaliana]
            gi|332657507|gb|AEE82907.1| CTC-interacting domain 12
            protein [Arabidopsis thaliana]
          Length = 336

 Score =  372 bits (956), Expect = e-101
 Identities = 195/285 (68%), Positives = 219/285 (76%), Gaps = 1/285 (0%)
 Frame = -3

Query: 1069 EGFKKEMRDLEEMLSKLNPMAKEFVPPSITGFRPVLQPPQFGYIADGN-FVVHTNSPVAT 893
            E FK++MR+L E+LSKLNPMAKEF+PPS+T  +PV+     G+ A  N FV   N PV  
Sbjct: 60   ESFKRDMRELHELLSKLNPMAKEFIPPSLT--KPVVNGFNGGFFAVNNGFVAAGNFPVNE 117

Query: 892  GGNIARRKKTGYSHGKRRMNSRTSMAQREEVIRRTVYVSDIDHQVTEEHLAALFISCGQV 713
             G+  R+K  G   GKRRMN RTS+AQREE+IRRTVYVSDID QVTEE LA LFI  GQV
Sbjct: 118  DGSFRRKKSFG-QQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQV 176

Query: 712  VDCRVCGDPNSILRFAFVEFTDEDGARNALSLEGTMLGFYPVRVLPSKTAIAPVNPTFLP 533
            VDCR+CGDPNS+LRFAF+EFTDE GAR AL+L GTMLGFYPV+V+PSKTAIAPVNPTFLP
Sbjct: 177  VDCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLP 236

Query: 532  RSEDEREMCARTIYCTNIDKKITQADVKLFFEXXXXXXXXXXXXXXXXXXXXXXXTRIAF 353
            R+EDEREMCARTIYCTNIDKK+TQ D+KLFFE                       TRI F
Sbjct: 237  RTEDEREMCARTIYCTNIDKKLTQTDIKLFFE-----SVCGEVYRLRLLGDYHHPTRIGF 291

Query: 352  VEFVMAESAIAALNCSGVFLGSLPIRVSPSKTPVRQQRVPRSAMH 218
            VEFVMAESAIAALNCSGV LGSLPIRVSPSKTPVR + +PR  MH
Sbjct: 292  VEFVMAESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336


>ref|XP_002872527.1| RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata]
            gi|297318364|gb|EFH48786.1| RNA-binding protein 37
            [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score =  372 bits (955), Expect = e-100
 Identities = 198/285 (69%), Positives = 218/285 (76%), Gaps = 1/285 (0%)
 Frame = -3

Query: 1069 EGFKKEMRDLEEMLSKLNPMAKEFVPPSITGFRPVLQPPQFGYIADGN-FVVHTNSPVAT 893
            E FK++MR+L E+LSKLNPMAKEFVPPS+T  +PV+     G+ A  N F    N PV  
Sbjct: 60   ESFKRDMRELHELLSKLNPMAKEFVPPSLT--KPVVNGFNGGFFAVNNGFGAAGNFPVNE 117

Query: 892  GGNIARRKKTGYSHGKRRMNSRTSMAQREEVIRRTVYVSDIDHQVTEEHLAALFISCGQV 713
             G   R+K  G   GKRRMN RTS+AQREE+IRRTVYVSDID QVTEE LA LFI  GQV
Sbjct: 118  DGGFRRKKSFG-QQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQV 176

Query: 712  VDCRVCGDPNSILRFAFVEFTDEDGARNALSLEGTMLGFYPVRVLPSKTAIAPVNPTFLP 533
            VDCR+CGDPNS+LRFAF+EFTDE GAR ALSL GTMLGFYPV+V+PSKTAIAPVNPTFLP
Sbjct: 177  VDCRICGDPNSVLRFAFIEFTDEVGARAALSLSGTMLGFYPVKVMPSKTAIAPVNPTFLP 236

Query: 532  RSEDEREMCARTIYCTNIDKKITQADVKLFFEXXXXXXXXXXXXXXXXXXXXXXXTRIAF 353
            R+EDEREMCARTIYCTNIDKK+TQAD+KLFFE                       TRI F
Sbjct: 237  RTEDEREMCARTIYCTNIDKKLTQADIKLFFE-----SVCGEVYRLRLLGDYHHPTRIGF 291

Query: 352  VEFVMAESAIAALNCSGVFLGSLPIRVSPSKTPVRQQRVPRSAMH 218
            VEFVMAESAIAALNCSGV LGSLPIRVSPSKTPVR + VPR  MH
Sbjct: 292  VEFVMAESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAVPRHQMH 336


>ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800126 [Glycine max]
          Length = 369

 Score =  370 bits (949), Expect = e-100
 Identities = 192/284 (67%), Positives = 217/284 (76%)
 Frame = -3

Query: 1069 EGFKKEMRDLEEMLSKLNPMAKEFVPPSITGFRPVLQPPQFGYIADGNFVVHTNSPVATG 890
            E FK++MRDLEE+LSKLNPMA+EFVPPS+     +L  P  G+    NF++  N     G
Sbjct: 92   ESFKRDMRDLEELLSKLNPMAEEFVPPSLANTHGLLAGPNAGFGYTNNFILPNNYGNTNG 151

Query: 889  GNIARRKKTGYSHGKRRMNSRTSMAQREEVIRRTVYVSDIDHQVTEEHLAALFISCGQVV 710
                RR+K GY+ GKRRMN +  M +REE+IRRTVYVSDID  VTEE LAALF++CGQVV
Sbjct: 152  QTNNRRRKNGYNPGKRRMNHKMDMEKREEMIRRTVYVSDIDQLVTEEQLAALFLNCGQVV 211

Query: 709  DCRVCGDPNSILRFAFVEFTDEDGARNALSLEGTMLGFYPVRVLPSKTAIAPVNPTFLPR 530
            DCRVCGDPNSILRFAF+EFTD++GAR ALSL GTMLG+YP+RVLPSKTAIAPVNPTFLPR
Sbjct: 212  DCRVCGDPNSILRFAFIEFTDDEGARAALSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPR 271

Query: 529  SEDEREMCARTIYCTNIDKKITQADVKLFFEXXXXXXXXXXXXXXXXXXXXXXXTRIAFV 350
            SEDEREMC+RTIYCTNIDKK+TQADVK FFE                       TRIAFV
Sbjct: 272  SEDEREMCSRTIYCTNIDKKLTQADVKHFFE-----SICGEVHRLRLLGDYHHSTRIAFV 326

Query: 349  EFVMAESAIAALNCSGVFLGSLPIRVSPSKTPVRQQRVPRSAMH 218
            EF +AESAIAAL+CSGV LGSLPIRVSPSKTPVR  R PR  MH
Sbjct: 327  EFALAESAIAALSCSGVILGSLPIRVSPSKTPVR-PRAPRPPMH 369


>ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
            gi|302143972|emb|CBI23077.3| unnamed protein product
            [Vitis vinifera]
          Length = 361

 Score =  369 bits (946), Expect = 1e-99
 Identities = 199/279 (71%), Positives = 218/279 (78%)
 Frame = -3

Query: 1054 EMRDLEEMLSKLNPMAKEFVPPSITGFRPVLQPPQFGYIADGNFVVHTNSPVATGGNIAR 875
            ++RDLE++LSKLNPMA+EFVPPS+           FGY    NFV+  N   A G N  R
Sbjct: 93   DIRDLEDLLSKLNPMAEEFVPPSLANGHGWSAGAAFGYT--NNFVLQANFGNANG-NAGR 149

Query: 874  RKKTGYSHGKRRMNSRTSMAQREEVIRRTVYVSDIDHQVTEEHLAALFISCGQVVDCRVC 695
            RK+  Y+  KRR+NSRTSMAQREEVI+RTVYVSDID QVTEE LAALFI+CGQVVDCR+C
Sbjct: 150  RKRNNYNQ-KRRINSRTSMAQREEVIKRTVYVSDIDQQVTEEDLAALFINCGQVVDCRIC 208

Query: 694  GDPNSILRFAFVEFTDEDGARNALSLEGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 515
            GDPNS+LRFAFVEFTDE+GAR ALSL GTMLG+YPVRVLPSKTAIAPVNPTFLPRSEDER
Sbjct: 209  GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDER 268

Query: 514  EMCARTIYCTNIDKKITQADVKLFFEXXXXXXXXXXXXXXXXXXXXXXXTRIAFVEFVMA 335
            EMCARTIYCTNIDKK+TQA+VKLFFE                       TRIAFVEFVMA
Sbjct: 269  EMCARTIYCTNIDKKVTQAEVKLFFE-----SICGEVHRLRLLGDYHHSTRIAFVEFVMA 323

Query: 334  ESAIAALNCSGVFLGSLPIRVSPSKTPVRQQRVPRSAMH 218
            ESAIAALNCSG  LGSLPIRVSPSKTPVR  R PR A+H
Sbjct: 324  ESAIAALNCSGAILGSLPIRVSPSKTPVR-PRAPRPALH 361