BLASTX nr result
ID: Cnidium21_contig00002795
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00002795
(1853 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ... 233 2e-76
emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera] 229 3e-75
ref|XP_002319308.1| predicted protein [Populus trichocarpa] gi|2... 221 5e-72
sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding prot... 210 2e-71
ref|XP_002316998.1| predicted protein [Populus trichocarpa] gi|2... 218 1e-70
>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 233 bits (593), Expect(2) = 2e-76
Identities = 112/135 (82%), Positives = 124/135 (91%)
Frame = +1
Query: 322 SRAAAEQVLQSYNGTPMPNGEQNFRLNWATLGAGERRTDDSPDYTIFVGDLAADVTDYLL 501
+RAAAE++LQ+YNGT MPN EQNFRLNWATLGAGERR DD+PDYTIFVGDLA+DVTDY+L
Sbjct: 140 TRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVL 199
Query: 502 QETFKPHYLSVKGAKVVTDRTTGRSKGYGFVRFGDETEQMRAMREMNGTLCSTRSMRIGP 681
QETF+ HY SVKGAKVVTDRTTGRSKGYGFVRFGDE EQ+RAM EMNG CSTR MRIGP
Sbjct: 200 QETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGP 259
Query: 682 AATKKPIGGGQQYEK 726
AATKKP+ GGQQ++K
Sbjct: 260 AATKKPV-GGQQFQK 273
Score = 82.0 bits (201), Expect(2) = 2e-76
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +3
Query: 81 DEIRSLWIGDLQPWMDEAYINTCFYNTGELVAVKVIRNKQTGQPEGYG 224
+EIRSLWIGDLQPWM+E Y+ CF TGE+V+VKVIRNKQTGQ EGYG
Sbjct: 87 EEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYG 134
>emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 229 bits (585), Expect(2) = 3e-75
Identities = 110/136 (80%), Positives = 121/136 (88%)
Frame = +1
Query: 322 SRAAAEQVLQSYNGTPMPNGEQNFRLNWATLGAGERRTDDSPDYTIFVGDLAADVTDYLL 501
+RAAAE++LQ+YNGT MPN EQNFRLNWATLGAGERR DD+PDYTIFVGDLA+DVTDY+L
Sbjct: 125 TRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVL 184
Query: 502 QETFKPHYLSVKGAKVVTDRTTGRSKGYGFVRFGDETEQMRAMREMNGTLCSTRSMRIGP 681
QETF+ HY SVKGAKVVTDRTTGRSKGYGFVRFGDE EQ+RAM EMNG CSTR MRIGP
Sbjct: 185 QETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGP 244
Query: 682 AATKKPIGGGQQYEKG 729
AATKKP+G Q +G
Sbjct: 245 AATKKPVGASFQNTQG 260
Score = 80.9 bits (198), Expect(2) = 3e-75
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = +3
Query: 81 DEIRSLWIGDLQPWMDEAYINTCFYNTGELVAVKVIRNKQTGQPEGYG 224
+EIRSLWIGDLQPWM+E Y CF TGE+V+VKVIRNKQTGQ EGYG
Sbjct: 72 EEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYG 119
>ref|XP_002319308.1| predicted protein [Populus trichocarpa] gi|222857684|gb|EEE95231.1|
predicted protein [Populus trichocarpa]
Length = 344
Score = 221 bits (563), Expect(2) = 5e-72
Identities = 109/137 (79%), Positives = 117/137 (85%)
Frame = +1
Query: 316 FRSRAAAEQVLQSYNGTPMPNGEQNFRLNWATLGAGERRTDDSPDYTIFVGDLAADVTDY 495
F S AAAE++LQ+YNGTPMPN EQ FRLNWATLGAGERR DD PDYT+F+GDLAADV DY
Sbjct: 115 FVSHAAAERILQTYNGTPMPNSEQTFRLNWATLGAGERRQDDGPDYTVFIGDLAADVNDY 174
Query: 496 LLQETFKPHYLSVKGAKVVTDRTTGRSKGYGFVRFGDETEQMRAMREMNGTLCSTRSMRI 675
LLQETF+ Y SVKGAKVVTDR TGRSKGYGFVRF DE EQMRAM EMNG CSTR MRI
Sbjct: 175 LLQETFRNVYSSVKGAKVVTDRVTGRSKGYGFVRFADENEQMRAMVEMNGQYCSTRPMRI 234
Query: 676 GPAATKKPIGGGQQYEK 726
GPAATKKP+ QQY+K
Sbjct: 235 GPAATKKPL--TQQYQK 249
Score = 78.6 bits (192), Expect(2) = 5e-72
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = +3
Query: 81 DEIRSLWIGDLQPWMDEAYINTCFYNTGELVAVKVIRNKQTGQPEGYG 224
DEI+SLWIGDLQ WMDE YI + F TGE+V KVIRNKQTG PEGYG
Sbjct: 64 DEIKSLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGYG 111
>sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45
[Nicotiana plumbaginifolia]
Length = 409
Score = 210 bits (535), Expect(2) = 2e-71
Identities = 104/134 (77%), Positives = 117/134 (87%)
Frame = +1
Query: 316 FRSRAAAEQVLQSYNGTPMPNGEQNFRLNWATLGAGERRTDDSPDYTIFVGDLAADVTDY 495
FRS AAAE +LQ+YNGT MPN EQNFR+NWA+LGAGERR DDS ++TIFVGDLAADVTDY
Sbjct: 132 FRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERR-DDSAEHTIFVGDLAADVTDY 190
Query: 496 LLQETFKPHYLSVKGAKVVTDRTTGRSKGYGFVRFGDETEQMRAMREMNGTLCSTRSMRI 675
+LQETFK Y SV+GAKVVTDR TGRSKGYGFV+F DE+EQ+RAM EMNG LCSTR MRI
Sbjct: 191 ILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRPMRI 250
Query: 676 GPAATKKPIGGGQQ 717
GPAA KKP+G Q+
Sbjct: 251 GPAANKKPVGTPQK 264
Score = 87.8 bits (216), Expect(2) = 2e-71
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = +3
Query: 81 DEIRSLWIGDLQPWMDEAYINTCFYNTGELVAVKVIRNKQTGQPEGYG 224
+E+RSLWIGDLQ WMDE Y++TCFY+TGELV+ KVIRNKQTGQ EGYG
Sbjct: 81 NEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYG 128
>ref|XP_002316998.1| predicted protein [Populus trichocarpa] gi|222860063|gb|EEE97610.1|
predicted protein [Populus trichocarpa]
Length = 403
Score = 218 bits (555), Expect(2) = 1e-70
Identities = 108/137 (78%), Positives = 117/137 (85%)
Frame = +1
Query: 316 FRSRAAAEQVLQSYNGTPMPNGEQNFRLNWATLGAGERRTDDSPDYTIFVGDLAADVTDY 495
F SRAAAE++LQ+YNGTPMPN EQ FRLNWATLGAGERR DD PD+T+FVGDLAADV DY
Sbjct: 117 FVSRAAAERILQTYNGTPMPNSEQAFRLNWATLGAGERRQDDGPDFTVFVGDLAADVNDY 176
Query: 496 LLQETFKPHYLSVKGAKVVTDRTTGRSKGYGFVRFGDETEQMRAMREMNGTLCSTRSMRI 675
LLQETF+ Y SVKGAKVVTDR TGRSKGYGF+RF DE EQ RAM EMNG CSTR MRI
Sbjct: 177 LLQETFRNVYPSVKGAKVVTDRVTGRSKGYGFIRFADENEQRRAMVEMNGQYCSTRPMRI 236
Query: 676 GPAATKKPIGGGQQYEK 726
GPAATKKP+ QQY+K
Sbjct: 237 GPAATKKPL--TQQYQK 251
Score = 77.4 bits (189), Expect(2) = 1e-70
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = +3
Query: 81 DEIRSLWIGDLQPWMDEAYINTCFYNTGELVAVKVIRNKQTGQPEGYG 224
DEI+SLWIGDLQ WMDE Y+ + F TGE+V KVIRNKQTG PEGYG
Sbjct: 66 DEIKSLWIGDLQQWMDENYLLSIFSATGEIVQAKVIRNKQTGYPEGYG 113