BLASTX nr result

ID: Cnidium21_contig00002768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002768
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326768.1| predicted protein [Populus trichocarpa] gi|2...   278   1e-72
ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|2...   276   5e-72
ref|XP_002322840.1| predicted protein [Populus trichocarpa] gi|2...   272   8e-71
ref|XP_002274000.1| PREDICTED: 60S ribosomal protein L13-2 [Viti...   272   1e-70
ref|XP_002519996.1| 60S ribosomal protein L13, putative [Ricinus...   271   1e-70

>ref|XP_002326768.1| predicted protein [Populus trichocarpa] gi|222834090|gb|EEE72567.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  278 bits (711), Expect = 1e-72
 Identities = 143/199 (71%), Positives = 150/199 (75%)
 Frame = +1

Query: 142 MKHNNVIPNGHFKKHWQNYIKTWFNQPARKTRRRNARQKKAVKTFPRPTAGPLRPIVHGQ 321
           +KHNNV+PNGHFKKHWQNY+KTWFNQPARKTRRR ARQKKAVK FPRPTAGPLRPIVHGQ
Sbjct: 2   VKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPIVHGQ 61

Query: 322 TLKYNMKVRAGRGFSXXXXXXXXXXXXXXXTIGIAVDHRRRNRSLEGLQTNVQRLKTYKA 501
           TLKYNMKVRAGRGFS               TIGIAVDHRRRNRSLEGLQTNVQRLKTYKA
Sbjct: 62  TLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLKTYKA 121

Query: 502 KLVVFPRRARKFKGGDSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKPTVELVKVTDEMK 681
           KLVVFPRRARK K GDSAP                           KP+VELVKVT+EMK
Sbjct: 122 KLVVFPRRARKSKAGDSAP--------EELATATQVQGHFMPIVREKPSVELVKVTEEMK 173

Query: 682 SFNAYSKLRAERTHERHLG 738
           SF AY KLRAERT+ RH+G
Sbjct: 174 SFRAYDKLRAERTNARHVG 192


>ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|222857408|gb|EEE94955.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  276 bits (706), Expect = 5e-72
 Identities = 142/199 (71%), Positives = 147/199 (73%)
 Frame = +1

Query: 142 MKHNNVIPNGHFKKHWQNYIKTWFNQPARKTRRRNARQKKAVKTFPRPTAGPLRPIVHGQ 321
           +KHNNV+PNGHFKKHWQNY+KTWFNQPARKTRRR ARQKKAVK FPRPTAGPLRPIVHGQ
Sbjct: 2   VKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPIVHGQ 61

Query: 322 TLKYNMKVRAGRGFSXXXXXXXXXXXXXXXTIGIAVDHRRRNRSLEGLQTNVQRLKTYKA 501
           TLKYNMKVRAGRGFS               TIGIAVDHRRRNRSLEGLQ NVQRLKTYKA
Sbjct: 62  TLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQANVQRLKTYKA 121

Query: 502 KLVVFPRRARKFKGGDSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKPTVELVKVTDEMK 681
           KLVVFPRRARKFK GDSAP                           KP VELVKVT+EMK
Sbjct: 122 KLVVFPRRARKFKAGDSAP--------EELATATQVQGQIMPIVLEKPCVELVKVTEEMK 173

Query: 682 SFNAYSKLRAERTHERHLG 738
           SF AY KLR ERT  RH+G
Sbjct: 174 SFRAYDKLRVERTSARHVG 192


>ref|XP_002322840.1| predicted protein [Populus trichocarpa] gi|222867470|gb|EEF04601.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  272 bits (696), Expect = 8e-71
 Identities = 138/199 (69%), Positives = 147/199 (73%)
 Frame = +1

Query: 142 MKHNNVIPNGHFKKHWQNYIKTWFNQPARKTRRRNARQKKAVKTFPRPTAGPLRPIVHGQ 321
           +KHNNV+PNGHFKKHWQNY+KTWFNQPARKTRRR ARQKKAVK FPRPTAGPLRPIVHGQ
Sbjct: 2   VKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPIVHGQ 61

Query: 322 TLKYNMKVRAGRGFSXXXXXXXXXXXXXXXTIGIAVDHRRRNRSLEGLQTNVQRLKTYKA 501
           TLKYNMKVRAGRGFS               TIGIAVDHRR+N SLEGLQ N+QRLKTYKA
Sbjct: 62  TLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRKNHSLEGLQANIQRLKTYKA 121

Query: 502 KLVVFPRRARKFKGGDSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKPTVELVKVTDEMK 681
           KLVVFPR ARKFK GDSAP                           KP+VELVKVT+EMK
Sbjct: 122 KLVVFPRHARKFKAGDSAP--------EELATATQVQGHIMPIACEKPSVELVKVTEEMK 173

Query: 682 SFNAYSKLRAERTHERHLG 738
           SF AY KLR ERT+ RH+G
Sbjct: 174 SFKAYDKLRVERTNARHVG 192


>ref|XP_002274000.1| PREDICTED: 60S ribosomal protein L13-2 [Vitis vinifera]
           gi|296085355|emb|CBI29087.3| unnamed protein product
           [Vitis vinifera]
          Length = 207

 Score =  272 bits (695), Expect = 1e-70
 Identities = 138/199 (69%), Positives = 146/199 (73%)
 Frame = +1

Query: 142 MKHNNVIPNGHFKKHWQNYIKTWFNQPARKTRRRNARQKKAVKTFPRPTAGPLRPIVHGQ 321
           +KHNNV+PNGHFKKHWQNY+KTWFNQPARKTRRR ARQKKAVK FPRPT GPLRP+VHGQ
Sbjct: 2   VKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTVGPLRPLVHGQ 61

Query: 322 TLKYNMKVRAGRGFSXXXXXXXXXXXXXXXTIGIAVDHRRRNRSLEGLQTNVQRLKTYKA 501
           TLKYNMKVRAGRGFS               TIGI+VDHRR+NRSLE LQ NVQRLKTYKA
Sbjct: 62  TLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRKNRSLESLQANVQRLKTYKA 121

Query: 502 KLVVFPRRARKFKGGDSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKPTVELVKVTDEMK 681
           KLVVFPRRARKFK GDSAP                           KP VELVKVTDEMK
Sbjct: 122 KLVVFPRRARKFKAGDSAP--------EELGTATQVQGQYMPVVQEKPVVELVKVTDEMK 173

Query: 682 SFNAYSKLRAERTHERHLG 738
           SF AY KLR ER +ERH+G
Sbjct: 174 SFKAYGKLRVERMNERHVG 192


>ref|XP_002519996.1| 60S ribosomal protein L13, putative [Ricinus communis]
           gi|223540760|gb|EEF42320.1| 60S ribosomal protein L13,
           putative [Ricinus communis]
          Length = 207

 Score =  271 bits (694), Expect = 1e-70
 Identities = 138/199 (69%), Positives = 148/199 (74%)
 Frame = +1

Query: 142 MKHNNVIPNGHFKKHWQNYIKTWFNQPARKTRRRNARQKKAVKTFPRPTAGPLRPIVHGQ 321
           +KHNNV+PNGHFKKHWQNY+KTWFNQPARKTRRR ARQKKAVK FPRPTAGPLRPIVHGQ
Sbjct: 2   VKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRAARQKKAVKIFPRPTAGPLRPIVHGQ 61

Query: 322 TLKYNMKVRAGRGFSXXXXXXXXXXXXXXXTIGIAVDHRRRNRSLEGLQTNVQRLKTYKA 501
           TLKYNMK+RAGRGF+               TIGIAVDHRR+NRSLEGLQ NVQRLKTYKA
Sbjct: 62  TLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKA 121

Query: 502 KLVVFPRRARKFKGGDSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKPTVELVKVTDEMK 681
           KLVVFPRRARKFK GDSA                            KP+VELVKVT+EMK
Sbjct: 122 KLVVFPRRARKFKAGDSA--------AEELATATQVQGQYMPIAREKPSVELVKVTEEMK 173

Query: 682 SFNAYSKLRAERTHERHLG 738
           SF AY KLR ER ++RHLG
Sbjct: 174 SFKAYDKLRVERMNQRHLG 192


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