BLASTX nr result

ID: Cnidium21_contig00002751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002751
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149241.1| PREDICTED: mitochondrial substrate carrier f...   169   3e-40
ref|XP_002315175.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_002526854.1| peroxisomal membrane protein pmp34, putative...   162   2e-38
ref|XP_002881687.1| peroxisomal membrane protein [Arabidopsis ly...   162   4e-38
gb|AFK47576.1| unknown [Lotus japonicus]                              161   5e-38

>ref|XP_004149241.1| PREDICTED: mitochondrial substrate carrier family protein Q-like
           [Cucumis sativus] gi|449524168|ref|XP_004169095.1|
           PREDICTED: mitochondrial substrate carrier family
           protein Q-like [Cucumis sativus]
          Length = 341

 Score =  169 bits (428), Expect = 3e-40
 Identities = 88/116 (75%), Positives = 100/116 (86%)
 Frame = -1

Query: 542 LSKDGAKGVTALEIFLLGAVAKLGATVVTYPLNVVKSRLQAKQVTNGDKKHQYKGTLDAV 363
           L KDG+ GVTALEIF LGA+AKLGATVVTYPL VVK+RLQAKQV  GDK+HQYKGTLDA+
Sbjct: 225 LRKDGS-GVTALEIFFLGALAKLGATVVTYPLLVVKARLQAKQVVAGDKRHQYKGTLDAI 283

Query: 362 MKMIQYEGFSGFYKGMGTKVVQSVLAAAVLFMIKEELVNWARWWLMKNSVSSVRSK 195
           +KMI+YEG  GFYKGMGTK+VQSVLAAAVLFM+KEELV  AR+ L K  V  ++SK
Sbjct: 284 LKMIRYEGLYGFYKGMGTKIVQSVLAAAVLFMVKEELVQSARFLLTKGPVGRIKSK 339


>ref|XP_002315175.1| predicted protein [Populus trichocarpa] gi|222864215|gb|EEF01346.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  167 bits (422), Expect = 1e-39
 Identities = 86/116 (74%), Positives = 96/116 (82%)
 Frame = -1

Query: 542 LSKDGAKGVTALEIFLLGAVAKLGATVVTYPLNVVKSRLQAKQVTNGDKKHQYKGTLDAV 363
           L K G  GVTALEIFLLGA+AKLGATVVTYPL VVKSRLQAKQ T GDK+H Y+GTLDA+
Sbjct: 223 LVKQGDTGVTALEIFLLGALAKLGATVVTYPLLVVKSRLQAKQTTTGDKRHNYEGTLDAI 282

Query: 362 MKMIQYEGFSGFYKGMGTKVVQSVLAAAVLFMIKEELVNWARWWLMKNSVSSVRSK 195
           +KMI+YEG  GFYKGM TK+VQSVLAAAVLFMIKEELV  AR  L K   S+ R++
Sbjct: 283 LKMIRYEGLHGFYKGMSTKIVQSVLAAAVLFMIKEELVRGARMLLTKGGASTARTR 338


>ref|XP_002526854.1| peroxisomal membrane protein pmp34, putative [Ricinus communis]
           gi|223533753|gb|EEF35485.1| peroxisomal membrane protein
           pmp34, putative [Ricinus communis]
          Length = 338

 Score =  162 bits (411), Expect = 2e-38
 Identities = 84/116 (72%), Positives = 96/116 (82%)
 Frame = -1

Query: 542 LSKDGAKGVTALEIFLLGAVAKLGATVVTYPLNVVKSRLQAKQVTNGDKKHQYKGTLDAV 363
           L K G   VTA+EIFLLGA+AKLGATVVTYPL VVKSRLQAKQ+  GDK+H Y+GTLDA+
Sbjct: 221 LRKRGDVAVTAVEIFLLGALAKLGATVVTYPLLVVKSRLQAKQLKTGDKRHHYEGTLDAI 280

Query: 362 MKMIQYEGFSGFYKGMGTKVVQSVLAAAVLFMIKEELVNWARWWLMKNSVSSVRSK 195
           +KMI YEGF GFYKGM TK+VQSVLAAAVLFM+KEELV   R+ L K SV+  RS+
Sbjct: 281 LKMIHYEGFYGFYKGMNTKIVQSVLAAAVLFMVKEELVRGTRFLLTKASVNRTRSR 336


>ref|XP_002881687.1| peroxisomal membrane protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327526|gb|EFH57946.1| peroxisomal membrane protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 331

 Score =  162 bits (409), Expect = 4e-38
 Identities = 85/108 (78%), Positives = 93/108 (86%)
 Frame = -1

Query: 530 GAKGVTALEIFLLGAVAKLGATVVTYPLNVVKSRLQAKQVTNGDKKHQYKGTLDAVMKMI 351
           G+  VTALE FLLGAVAKLGATV TYPL VVKSRLQAKQVT GDK+HQYKGTLDA++KMI
Sbjct: 225 GSNSVTALETFLLGAVAKLGATVTTYPLLVVKSRLQAKQVTTGDKRHQYKGTLDAILKMI 284

Query: 350 QYEGFSGFYKGMGTKVVQSVLAAAVLFMIKEELVNWARWWLMKNSVSS 207
           QYEG  GFYKGM TK+VQSVLAAAVLFMIKEELV  A+  L+ N+ SS
Sbjct: 285 QYEGLYGFYKGMSTKIVQSVLAAAVLFMIKEELVKGAK-LLLSNATSS 331


>gb|AFK47576.1| unknown [Lotus japonicus]
          Length = 142

 Score =  161 bits (408), Expect = 5e-38
 Identities = 83/114 (72%), Positives = 96/114 (84%)
 Frame = -1

Query: 536 KDGAKGVTALEIFLLGAVAKLGATVVTYPLNVVKSRLQAKQVTNGDKKHQYKGTLDAVMK 357
           K  + GVTALEIFLLGA+AKLGATVVTYPL VVK+RLQA+QV NGDK+H YKGT DA++K
Sbjct: 27  KKDSNGVTALEIFLLGALAKLGATVVTYPLLVVKARLQARQVKNGDKRHNYKGTQDAIIK 86

Query: 356 MIQYEGFSGFYKGMGTKVVQSVLAAAVLFMIKEELVNWARWWLMKNSVSSVRSK 195
           MI+YEG  GFYKGMGTK+VQSVLAAAVLFM+KEELV   R  L K S ++V+ K
Sbjct: 87  MIRYEGLYGFYKGMGTKIVQSVLAAAVLFMVKEELVKQIRLLLTKASSNTVKPK 140


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