BLASTX nr result

ID: Cnidium21_contig00002740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002740
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307658.1| predicted protein [Populus trichocarpa] gi|1...    64   1e-08
ref|XP_002528830.1| 60S ribosomal protein L14, putative [Ricinus...    63   3e-08
ref|XP_004147153.1| PREDICTED: 60S ribosomal protein L14-2-like ...    62   6e-08
ref|XP_002884203.1| predicted protein [Arabidopsis lyrata subsp....    62   6e-08
dbj|BAA83469.1| Csf-1 [Cucumis sativus]                                62   6e-08

>ref|XP_002307658.1| predicted protein [Populus trichocarpa] gi|118485504|gb|ABK94606.1|
           unknown [Populus trichocarpa]
           gi|222857107|gb|EEE94654.1| predicted protein [Populus
           trichocarpa]
          Length = 133

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = -3

Query: 433 VKKRREALTDFDRFKLMLAKIKKASLVREELAKLKKQTA 317
           V+KRR +L DFDRFKLMLAKIKKA +VR+ELAKLKK+TA
Sbjct: 95  VQKRRASLNDFDRFKLMLAKIKKAGIVRQELAKLKKETA 133


>ref|XP_002528830.1| 60S ribosomal protein L14, putative [Ricinus communis]
           gi|223531742|gb|EEF33564.1| 60S ribosomal protein L14,
           putative [Ricinus communis]
          Length = 134

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -3

Query: 433 VKKRREALTDFDRFKLMLAKIKKASLVREELAKLKKQTA 317
           V+KRR AL DFDRFKLMLAKIK+  L+R+ELAKLKK+TA
Sbjct: 95  VQKRRAALNDFDRFKLMLAKIKRGGLIRQELAKLKKETA 133


>ref|XP_004147153.1| PREDICTED: 60S ribosomal protein L14-2-like [Cucumis sativus]
           gi|449532015|ref|XP_004172980.1| PREDICTED: 60S
           ribosomal protein L14-2-like [Cucumis sativus]
          Length = 133

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = -3

Query: 433 VKKRREALTDFDRFKLMLAKIKKASLVREELAKLKKQTA 317
           VKKRR +L DFDRFKLMLAKIK+A LVR+ELAKLKK  A
Sbjct: 95  VKKRRASLNDFDRFKLMLAKIKRAGLVRQELAKLKKAEA 133


>ref|XP_002884203.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330043|gb|EFH60462.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 134

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/39 (74%), Positives = 36/39 (92%)
 Frame = -3

Query: 433 VKKRREALTDFDRFKLMLAKIKKASLVREELAKLKKQTA 317
           V+KRR AL DFDRFK+MLAKIK+A +VR+ELAKLK++TA
Sbjct: 95  VQKRRAALNDFDRFKIMLAKIKRAGVVRQELAKLKRETA 133


>dbj|BAA83469.1| Csf-1 [Cucumis sativus]
          Length = 138

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = -3

Query: 433 VKKRREALTDFDRFKLMLAKIKKASLVREELAKLKKQTA 317
           VKKRR +L DFDRFKLMLAKIK+A LVR+ELAKLKK  A
Sbjct: 100 VKKRRASLNDFDRFKLMLAKIKRAGLVRQELAKLKKAEA 138


Top