BLASTX nr result

ID: Cnidium21_contig00002717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002717
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631656.1| PREDICTED: 50S ribosomal protein L27-like [V...   236   2e-60
emb|CBI32591.3| unnamed protein product [Vitis vinifera]              234   7e-60
gb|ADR71247.1| Mitochondrial 50S ribosomal protein L27 [Hevea br...   230   2e-58
gb|AFK37660.1| unknown [Lotus japonicus]                              228   5e-58
gb|AFK36091.1| unknown [Lotus japonicus]                              228   5e-58

>ref|XP_003631656.1| PREDICTED: 50S ribosomal protein L27-like [Vitis vinifera]
          Length = 146

 Score =  236 bits (603), Expect = 2e-60
 Identities = 111/135 (82%), Positives = 120/135 (88%)
 Frame = -3

Query: 606 RLNLSELVPKVPVYSSGSDASGGGFNLILRRWASKKTAGSTKNGRDSKPKNLGVKKFGGE 427
           R+N+ ELV  +PVY S SD SG G  LI  RWASKKTAGSTKNGRDSKPKNLGVKKFGGE
Sbjct: 10  RMNIKELVTNLPVYRSASDVSGEGLGLIFMRWASKKTAGSTKNGRDSKPKNLGVKKFGGE 69

Query: 426 RVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALKEGNVKFERHKLSGRKWVHVEPKDGHM 247
           RVIPGNIIVRQRGTRFHPGNYVGIGKDHTL+ALKEG VKFE+HKLSGRKWVHVEPKDGH+
Sbjct: 70  RVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALKEGCVKFEKHKLSGRKWVHVEPKDGHV 129

Query: 246 LHPIYSNAAGSHLKT 202
           LHP+Y++AA   LKT
Sbjct: 130 LHPVYADAAAPRLKT 144


>emb|CBI32591.3| unnamed protein product [Vitis vinifera]
          Length = 136

 Score =  234 bits (598), Expect = 7e-60
 Identities = 110/134 (82%), Positives = 119/134 (88%)
 Frame = -3

Query: 603 LNLSELVPKVPVYSSGSDASGGGFNLILRRWASKKTAGSTKNGRDSKPKNLGVKKFGGER 424
           +N+ ELV  +PVY S SD SG G  LI  RWASKKTAGSTKNGRDSKPKNLGVKKFGGER
Sbjct: 1   MNIKELVTNLPVYRSASDVSGEGLGLIFMRWASKKTAGSTKNGRDSKPKNLGVKKFGGER 60

Query: 423 VIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALKEGNVKFERHKLSGRKWVHVEPKDGHML 244
           VIPGNIIVRQRGTRFHPGNYVGIGKDHTL+ALKEG VKFE+HKLSGRKWVHVEPKDGH+L
Sbjct: 61  VIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALKEGCVKFEKHKLSGRKWVHVEPKDGHVL 120

Query: 243 HPIYSNAAGSHLKT 202
           HP+Y++AA   LKT
Sbjct: 121 HPVYADAAAPRLKT 134


>gb|ADR71247.1| Mitochondrial 50S ribosomal protein L27 [Hevea brasiliensis]
          Length = 149

 Score =  230 bits (586), Expect = 2e-58
 Identities = 111/139 (79%), Positives = 124/139 (89%), Gaps = 2/139 (1%)
 Frame = -3

Query: 606 RLNLSELVPKVPVYSSGSDASGGGFNLILRRWASKKTAGSTKNGRDSKPKNLGVKKFGGE 427
           RL + ELV  VPVY+S +D S GG +LILRRWA+KKTAGSTKNGRDSKPKNLGVKKFGGE
Sbjct: 11  RLKVKELVSNVPVYASLTDGSAGGLSLILRRWATKKTAGSTKNGRDSKPKNLGVKKFGGE 70

Query: 426 RVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALKEGNVKFERHKLSGRKWVHVEPKDGHM 247
           +VIPGNIIVRQRGTRFHPGNYVG+GKDHTL+ALKEGNVKFE +KLSGRKWVHVEPKDG+ 
Sbjct: 71  KVIPGNIIVRQRGTRFHPGNYVGMGKDHTLYALKEGNVKFETNKLSGRKWVHVEPKDGYE 130

Query: 246 LHPIYSNA--AGSHLKTAA 196
           LHP+Y+ A  A S LKTA+
Sbjct: 131 LHPVYATASVASSRLKTAS 149


>gb|AFK37660.1| unknown [Lotus japonicus]
          Length = 146

 Score =  228 bits (582), Expect = 5e-58
 Identities = 107/136 (78%), Positives = 120/136 (88%)
 Frame = -3

Query: 606 RLNLSELVPKVPVYSSGSDASGGGFNLILRRWASKKTAGSTKNGRDSKPKNLGVKKFGGE 427
           RL++ ELV  VPVY S  D SG G +++  RWASKKTAGSTKNGRDSKPKNLGVKKFGGE
Sbjct: 10  RLSIKELVTNVPVYRSTGDVSGEGLSMVFSRWASKKTAGSTKNGRDSKPKNLGVKKFGGE 69

Query: 426 RVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALKEGNVKFERHKLSGRKWVHVEPKDGHM 247
           RVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALK+G VKFER+KL+GRKWVHVEPK+GH+
Sbjct: 70  RVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALKQGLVKFERNKLTGRKWVHVEPKEGHV 129

Query: 246 LHPIYSNAAGSHLKTA 199
           LHP+Y +A+ S LK A
Sbjct: 130 LHPVYESASESELKVA 145


>gb|AFK36091.1| unknown [Lotus japonicus]
          Length = 181

 Score =  228 bits (582), Expect = 5e-58
 Identities = 107/136 (78%), Positives = 120/136 (88%)
 Frame = -3

Query: 606 RLNLSELVPKVPVYSSGSDASGGGFNLILRRWASKKTAGSTKNGRDSKPKNLGVKKFGGE 427
           RL++ ELV  VPVY S  D SG G +++  RWASKKTAGSTKNGRDSKPKNLGVKKFGGE
Sbjct: 45  RLSIKELVTNVPVYRSTGDVSGEGLSMVFSRWASKKTAGSTKNGRDSKPKNLGVKKFGGE 104

Query: 426 RVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALKEGNVKFERHKLSGRKWVHVEPKDGHM 247
           RVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALK+G VKFER+KL+GRKWVHVEPK+GH+
Sbjct: 105 RVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALKQGLVKFERNKLTGRKWVHVEPKEGHV 164

Query: 246 LHPIYSNAAGSHLKTA 199
           LHP+Y +A+ S LK A
Sbjct: 165 LHPVYESASESELKVA 180


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