BLASTX nr result

ID: Cnidium21_contig00002662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002662
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199142.1| delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 [...    95   5e-18
ref|NP_001078698.1| delta(3,5),delta(2,4)-dienoyl-CoA isomerase ...    95   5e-18
ref|XP_002865435.1| ATDCI1,DELTA-DIENOYL-COA isomerase 1 [Arabid...    90   2e-16
ref|NP_001241591.1| uncharacterized protein LOC100804855 [Glycin...    88   8e-16
ref|XP_002265340.1| PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA...    85   5e-15

>ref|NP_199142.1| delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 [Arabidopsis
           thaliana] gi|10177390|dbj|BAB10591.1| enoyl CoA
           hydratase-like protein [Arabidopsis thaliana]
           gi|18252833|gb|AAL62343.1| enoyl CoA hydratase-like
           protein [Arabidopsis thaliana]
           gi|25084271|gb|AAN72209.1| enoyl CoA hydratase-like
           protein [Arabidopsis thaliana]
           gi|332007553|gb|AED94936.1|
           delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1
           [Arabidopsis thaliana]
          Length = 278

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/76 (63%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = +1

Query: 61  MMEAEYKSLKITEAS--GGVYNLILNQPATLNALSPDFFIEFPKALSYLDSNPDVSVILL 234
           M    YK+L+I   +    V++LI+N+P+ LNALS DFFIEFPKALS LD NPDVSVI+L
Sbjct: 1   MTMESYKTLEIIRKNTDSSVFHLIINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIIL 60

Query: 235 SGNGNHFCAGIDINSL 282
           SG G HFC+GID+NSL
Sbjct: 61  SGAGKHFCSGIDLNSL 76


>ref|NP_001078698.1| delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 [Arabidopsis
           thaliana] gi|222423431|dbj|BAH19686.1| AT5G43280
           [Arabidopsis thaliana] gi|332007554|gb|AED94937.1|
           delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1
           [Arabidopsis thaliana]
          Length = 220

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/76 (63%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = +1

Query: 61  MMEAEYKSLKITEAS--GGVYNLILNQPATLNALSPDFFIEFPKALSYLDSNPDVSVILL 234
           M    YK+L+I   +    V++LI+N+P+ LNALS DFFIEFPKALS LD NPDVSVI+L
Sbjct: 1   MTMESYKTLEIIRKNTDSSVFHLIINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIIL 60

Query: 235 SGNGNHFCAGIDINSL 282
           SG G HFC+GID+NSL
Sbjct: 61  SGAGKHFCSGIDLNSL 76


>ref|XP_002865435.1| ATDCI1,DELTA-DIENOYL-COA isomerase 1 [Arabidopsis lyrata subsp.
           lyrata] gi|297311270|gb|EFH41694.1|
           ATDCI1,DELTA-DIENOYL-COA isomerase 1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 276

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
 Frame = +1

Query: 76  YKSLKITE--ASGGVYNLILNQPATLNALSPDFFIEFPKALSYLDSNPDVSVILLSGNGN 249
           YK+L+I    +   V++LI+N+P+ LNALS DFFIEFPKALS LD N DVSVI+LSG G 
Sbjct: 4   YKTLEIVRKNSDSSVFHLIINRPSHLNALSLDFFIEFPKALSSLDQNQDVSVIILSGAGK 63

Query: 250 HFCAGIDINSL 282
           HFC+GID+ SL
Sbjct: 64  HFCSGIDLTSL 74


>ref|NP_001241591.1| uncharacterized protein LOC100804855 [Glycine max]
           gi|255641662|gb|ACU21103.1| unknown [Glycine max]
          Length = 273

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/75 (60%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
 Frame = +1

Query: 64  MEAEYKSLKITEAS--GGVYNLILNQPATLNALSPDFFIEFPKALSYLDSNPDVSVILLS 237
           ME +Y SL+I E S   GV+ LILN+P+  NALS +FF EFPKAL  LD NP+V VI+LS
Sbjct: 1   MEEKYSSLEIVEESPNSGVFFLILNRPSRRNALSREFFSEFPKALHALDHNPEVKVIVLS 60

Query: 238 GNGNHFCAGIDINSL 282
           G G+HFC+GID++ L
Sbjct: 61  GAGDHFCSGIDLSLL 75


>ref|XP_002265340.1| PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase,
           mitochondrial [Vitis vinifera]
           gi|296088718|emb|CBI38168.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/71 (60%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
 Frame = +1

Query: 76  YKSLKITEAS--GGVYNLILNQPATLNALSPDFFIEFPKALSYLDSNPDVSVILLSGNGN 249
           YK+L+I + S    V++L LN+P+  NALS DFF EFPKAL  LD NP+VSVI+LSGNG 
Sbjct: 4   YKTLEIVQRSPKSSVFHLNLNRPSLRNALSLDFFSEFPKALDSLDQNPNVSVIILSGNGA 63

Query: 250 HFCAGIDINSL 282
           HFC+GID+  L
Sbjct: 64  HFCSGIDLKVL 74


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