BLASTX nr result

ID: Cnidium21_contig00002636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002636
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32867.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002283987.1| PREDICTED: 50S ribosomal protein 5, chloropl...    94   2e-17
ref|XP_002322592.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_004144312.1| PREDICTED: 50S ribosomal protein 5, chloropl...    64   1e-08
gb|AAF72995.1|AF261940_1 ribosomal protein 5 precursor [Spinacia...    60   2e-07

>emb|CBI32867.3| unnamed protein product [Vitis vinifera]
          Length = 124

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/101 (47%), Positives = 58/101 (57%)
 Frame = +1

Query: 97  NEVQICTPFVARQRGSFVVKASAEIDGTGSDAPETPSDSKEETVPVENLPLESKLQLKLE 276
           N V++  PF  +QR   +VKAS+++DG   D  ET S+ +E+ VPVENLPLESKLQLKLE
Sbjct: 24  NGVRLHAPFTVKQRDGVIVKASSDVDGVAPDGGETASEGEEDVVPVENLPLESKLQLKLE 83

Query: 277 AXXXXXXXXXXXXXXXXXXXXXXXXXXGRWPPSKMKKNKNV 399
                                      GRWPPSKMKKNKNV
Sbjct: 84  QKLRMKIAKKIRLRRKRLVRKRRMRKKGRWPPSKMKKNKNV 124


>ref|XP_002283987.1| PREDICTED: 50S ribosomal protein 5, chloroplastic-like [Vitis
           vinifera]
          Length = 144

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/101 (47%), Positives = 58/101 (57%)
 Frame = +1

Query: 97  NEVQICTPFVARQRGSFVVKASAEIDGTGSDAPETPSDSKEETVPVENLPLESKLQLKLE 276
           N V++  PF  +QR   +VKAS+++DG   D  ET S+ +E+ VPVENLPLESKLQLKLE
Sbjct: 44  NGVRLHAPFTVKQRDGVIVKASSDVDGVAPDGGETASEGEEDVVPVENLPLESKLQLKLE 103

Query: 277 AXXXXXXXXXXXXXXXXXXXXXXXXXXGRWPPSKMKKNKNV 399
                                      GRWPPSKMKKNKNV
Sbjct: 104 QKLRMKIAKKIRLRRKRLVRKRRMRKKGRWPPSKMKKNKNV 144


>ref|XP_002322592.1| predicted protein [Populus trichocarpa] gi|222867222|gb|EEF04353.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/102 (40%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
 Frame = +1

Query: 97  NEVQICTPFVARQRGSFVVKASAEIDGTG-SDAPETPSDSKEETVPVENLPLESKLQLKL 273
           N V+   P    + G+ +V+AS++IDGT  ++  E P +SKEE V V+ LPLESKLQ + 
Sbjct: 46  NGVRFQNPIRGNRIGAVIVRASSDIDGTAPTETSEPPVESKEEVVAVDKLPLESKLQERE 105

Query: 274 EAXXXXXXXXXXXXXXXXXXXXXXXXXXGRWPPSKMKKNKNV 399
           E                           GRWPPSKMKK KNV
Sbjct: 106 EQKMKMKLARKIRLRRNRLVRKRRMRKKGRWPPSKMKKLKNV 147


>ref|XP_004144312.1| PREDICTED: 50S ribosomal protein 5, chloroplastic-like [Cucumis
           sativus]
          Length = 153

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/104 (38%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
 Frame = +1

Query: 97  NEVQICTPFVARQRGSFVVKASAEIDGTG---SDAPETPSDSKEETVPVENLPLESKLQL 267
           N V++          S VVKA++E D TG   S   +  +++K+E VPV+ LPLESKLQ 
Sbjct: 50  NGVRLRNHSFVENTASLVVKAASETDATGETDSSDVQPAAEAKKEDVPVDKLPLESKLQE 109

Query: 268 KLEAXXXXXXXXXXXXXXXXXXXXXXXXXXGRWPPSKMKKNKNV 399
           +LE                           GRWPPSKMKK KNV
Sbjct: 110 RLEQKARMKLAKKIRLRRKRLVQKRHLRKKGRWPPSKMKKLKNV 153


>gb|AAF72995.1|AF261940_1 ribosomal protein 5 precursor [Spinacia oleracea]
          Length = 142

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/95 (40%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
 Frame = +1

Query: 118 PFVARQRGSFVVKASAEIDGT-GSDAPETPSDSKEETVPVENLPLESKLQLKLEAXXXXX 294
           P +A++RG+ V   SA  + T G D  +  S  +E  + V+NLPLESKLQLKLE      
Sbjct: 50  PVIAQKRGTVVAMVSAAAEETAGEDGDQ--SKVEEANISVQNLPLESKLQLKLEQKIKMK 107

Query: 295 XXXXXXXXXXXXXXXXXXXXXGRWPPSKMKKNKNV 399
                                G WPPSKMKK KNV
Sbjct: 108 MAKKIRLRRNRLMRKRKLRKRGAWPPSKMKKLKNV 142


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