BLASTX nr result

ID: Cnidium21_contig00002614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002614
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18988.3| unnamed protein product [Vitis vinifera]              198   2e-48
ref|XP_002284548.2| PREDICTED: SWI/SNF complex subunit SWI3C-lik...   192   2e-46
emb|CAN83645.1| hypothetical protein VITISV_016194 [Vitis vinifera]   190   6e-46
ref|XP_004161161.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF comp...   183   7e-44
ref|XP_004142633.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik...   176   7e-42

>emb|CBI18988.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score =  198 bits (504), Expect = 2e-48
 Identities = 127/295 (43%), Positives = 156/295 (52%), Gaps = 50/295 (16%)
 Frame = -2

Query: 1061 PFANYANPXXXXXXXXXXXVGPRVAAAYAHTTLIELTKDDQVATSDY------------- 921
            PFAN  NP           VGPRVAAA AH +LI L++++ +A +               
Sbjct: 381  PFANSGNPVMSMVAFLATAVGPRVAAACAHASLIALSEENALAAASGFIIPPEGSGHGNR 440

Query: 920  --------NITDSSQQKDST---------------PLSDXXXXXXXXXXXXXXXXXXXLF 810
                     +T+SSQ +D                  L                     LF
Sbjct: 441  MKEGGPHGELTNSSQHQDGNIAIQGSWGQNDAEVASLPVEKVRAAAKAGLAAAAMKAKLF 500

Query: 809  ADHEEREIQRLSANIINHQLKRLELKLKQITEVETILSKECEQVDRVKQRIAAERAALLS 630
            ADHEEREIQRLSANIINHQLKRLELKLKQ  EVET+L KECEQV+R +QR AAERA ++S
Sbjct: 501  ADHEEREIQRLSANIINHQLKRLELKLKQFAEVETLLMKECEQVERARQRFAAERARIIS 560

Query: 629  TQFGPAGVTRSTGLSASRPAMIYNSAGNTRQQTISDVPSQPYVSS-ANNQRVHPHVSPML 453
            T+FGP GVT    L    PA++ N+ GN RQQ IS  PSQP +S   NNQ++HPH+S  +
Sbjct: 561  TRFGPTGVTSPMNLPGVAPALVSNNTGNNRQQIISASPSQPSISGYGNNQQMHPHMS-FM 619

Query: 452  SQQPTYGLGPRLPLSAINLYPEVPN-------------ITNCTMSRPTSGTRSGV 327
             +QP +  GPRLPL+AI      P+               N  M RP SGT SG+
Sbjct: 620  PRQPMFSFGPRLPLAAIQPSSSTPSPNAMFNNSGNSQPTLNHPMMRPVSGTSSGL 674


>ref|XP_002284548.2| PREDICTED: SWI/SNF complex subunit SWI3C-like [Vitis vinifera]
          Length = 771

 Score =  192 bits (487), Expect = 2e-46
 Identities = 118/265 (44%), Positives = 146/265 (55%), Gaps = 37/265 (13%)
 Frame = -2

Query: 1061 PFANYANPXXXXXXXXXXXVGPRVAAAYAHTTLIELTKDDQVATSDY------------- 921
            PFAN  NP           VGPRVAAA AH +LI L++++ +A +               
Sbjct: 499  PFANSGNPVMSMVAFLATAVGPRVAAACAHASLIALSEENALAAASGFIIPPEGSGHGNR 558

Query: 920  --------NITDSSQQKDST---------------PLSDXXXXXXXXXXXXXXXXXXXLF 810
                     +T+SSQ +D                  L                     LF
Sbjct: 559  MKEGGPHGELTNSSQHQDGNIAIQGSWGQNDAEVASLPVEKVRAAAKAGLAAAAMKAKLF 618

Query: 809  ADHEEREIQRLSANIINHQLKRLELKLKQITEVETILSKECEQVDRVKQRIAAERAALLS 630
            ADHEEREIQRLSANIINHQLKRLELKLKQ  EVET+L KECEQV+R +QR AAERA ++S
Sbjct: 619  ADHEEREIQRLSANIINHQLKRLELKLKQFAEVETLLMKECEQVERARQRFAAERARIIS 678

Query: 629  TQFGPAGVTRSTGLSASRPAMIYNSAGNTRQQTISDVPSQPYVSS-ANNQRVHPHVSPML 453
            T+FGP GVT    L    PA++ N+ GN RQQ IS  PSQP +S   NNQ++HPH+S  +
Sbjct: 679  TRFGPTGVTSPMNLPGVAPALVSNNTGNNRQQIISASPSQPSISGYGNNQQMHPHMS-FM 737

Query: 452  SQQPTYGLGPRLPLSAINLYPEVPN 378
             +QP +  GPRLPL+AI      P+
Sbjct: 738  PRQPMFSFGPRLPLAAIQPSSSTPS 762


>emb|CAN83645.1| hypothetical protein VITISV_016194 [Vitis vinifera]
          Length = 334

 Score =  190 bits (482), Expect = 6e-46
 Identities = 120/275 (43%), Positives = 149/275 (54%), Gaps = 50/275 (18%)
 Frame = -2

Query: 1001 GPRVAAAYAHTTLIELTKDDQVATSDY---------------------NITDSSQQKDST 885
            GPRVAAA AH +LI L++++ +A +                        +T+SSQ +D  
Sbjct: 60   GPRVAAACAHASLIALSEENALAAASGFIIPPEGSGHGNRMKEGGPHGELTNSSQHQDGN 119

Query: 884  ---------------PLSDXXXXXXXXXXXXXXXXXXXLFADHEEREIQRLSANIINHQL 750
                            L                     LFADHEEREIQRLSANIINHQL
Sbjct: 120  IAIQGSWGQNDAEVASLPVEKVRAAAKAGLAAAAMKAKLFADHEEREIQRLSANIINHQL 179

Query: 749  KRLELKLKQITEVETILSKECEQVDRVKQRIAAERAALLSTQFGPAGVTRSTGLSASRPA 570
            KRLELKLKQ  EVET+L KECEQV+R +QR AAERA ++ST+FGP GVT    L    PA
Sbjct: 180  KRLELKLKQFAEVETLLMKECEQVERARQRFAAERARIISTRFGPTGVTSPMNLPGVAPA 239

Query: 569  MIYNSAGNTRQQTISDVPSQPYVSS-ANNQRVHPHVSPMLSQQPTYGLGPRLPLSAINLY 393
            ++ N+ GN RQQ IS  PSQP +S   NNQ++HPH+S  + +QP +  GPRLPL+AI   
Sbjct: 240  LVSNNTGNNRQQIISASPSQPSISGYGNNQQMHPHMS-FMPRQPMFSFGPRLPLAAIQPS 298

Query: 392  PEVPN-------------ITNCTMSRPTSGTRSGV 327
               P+               N  M RP SGT SG+
Sbjct: 299  SSTPSPNAMFNNSGNSQPTLNHPMMRPVSGTSSGL 333


>ref|XP_004161161.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3C-like
            [Cucumis sativus]
          Length = 779

 Score =  183 bits (464), Expect = 7e-44
 Identities = 123/283 (43%), Positives = 153/283 (54%), Gaps = 38/283 (13%)
 Frame = -2

Query: 1061 PFANYANPXXXXXXXXXXXVGPRVAAAYAHTTLIELTKDDQVAT--------SDYN-ITD 909
            PFAN  NP           +GPRVAA+ AH +L  L++D   ++        S Y  + +
Sbjct: 497  PFANSGNPVMALVAFLASAIGPRVAASCAHASLAALSEDSVASSGSIFHMEGSSYGELPN 556

Query: 908  SSQQKD-------STPLSDXXXXXXXXXXXXXXXXXXXLFADHEEREIQRLSANIINHQL 750
            S+ +KD       +T LS                    LFADHEEREIQRLSANIINHQL
Sbjct: 557  STDRKDENKAETEATLLSSERVKVAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQL 616

Query: 749  KRLELKLKQITEVETILSKECEQVDRVKQRIAAERAALLSTQFGPAGVTRSTGLSASRPA 570
            KRLELKLKQ  EVET L KECEQV+R +QR  AERA +L  QFGPAGVT    L    P+
Sbjct: 617  KRLELKLKQFAEVETFLMKECEQVERTRQRFVAERARMLGVQFGPAGVTPPASLPGVIPS 676

Query: 569  MIYNSAG-NTRQQTISDVPSQPYVS--SANNQRVHPHVSPMLSQQPTYGLGPRLPLSAIN 399
            M+ N++  N+R   IS   SQP VS  S N Q +HPH+S M  +QP +GLG RLPLSAI 
Sbjct: 677  MVVNNSNTNSRPNMISPPASQPSVSGYSNNQQPLHPHMSYM-PRQPMFGLGQRLPLSAIQ 735

Query: 398  LYPEVPNITNCT-------------------MSRPTSGTRSGV 327
               +   + + T                   M RP +G+ SG+
Sbjct: 736  QQQQQQQLPSTTSSNAMFNGPSNAQPSLSHPMMRPVTGSSSGL 778


>ref|XP_004142633.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Cucumis sativus]
          Length = 815

 Score =  176 bits (447), Expect = 7e-42
 Identities = 123/300 (41%), Positives = 153/300 (51%), Gaps = 55/300 (18%)
 Frame = -2

Query: 1061 PFANYANPXXXXXXXXXXXVGPRVAAAYAHTTLIELTKDDQVAT---------------- 930
            PFAN  NP           +GPRVAA+ AH +L  L++D   ++                
Sbjct: 516  PFANSGNPVMALVAFLASAIGPRVAASCAHASLAALSEDSVASSGSIFHMEGSVNANRMN 575

Query: 929  ---------SDYN-ITDSSQQKD-------STPLSDXXXXXXXXXXXXXXXXXXXLFADH 801
                     S Y  + +S+ +KD       +T LS                    LFADH
Sbjct: 576  VDAKQAREGSSYGELPNSTDRKDENKAETEATLLSSERVKVAAKAGLAAAATKAKLFADH 635

Query: 800  EEREIQRLSANIINHQLKRLELKLKQITEVETILSKECEQVDRVKQRIAAERAALLSTQF 621
            EEREIQRLSANIINHQLKRLELKLKQ  EVET L KECEQV+R +QR  AERA +L  QF
Sbjct: 636  EEREIQRLSANIINHQLKRLELKLKQFAEVETFLMKECEQVERTRQRFVAERARMLGVQF 695

Query: 620  GPAGVTRSTGLSASRPAMIYNSAG-NTRQQTISDVPSQPYVS--SANNQRVHPHVSPMLS 450
            GPAGVT    L    P+M+ N++  N+R   IS   SQP VS  S N Q +HPH+S M  
Sbjct: 696  GPAGVTPPASLPGVIPSMVVNNSNTNSRPNMISPPASQPSVSGYSNNQQPLHPHMSYM-P 754

Query: 449  QQPTYGLGPRLPLSAINLYPEVPNITNCT-------------------MSRPTSGTRSGV 327
            +QP +GLG RLPLSAI    +   + + T                   M RP +G+ SG+
Sbjct: 755  RQPMFGLGQRLPLSAIQQQQQQQQLPSTTSSNAMFNGPSNAQPSLSHPMMRPVTGSSSGL 814


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