BLASTX nr result
ID: Cnidium21_contig00002611
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00002611
(1506 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis... 239 e-127
ref|XP_003634397.1| PREDICTED: putative transcription elongation... 235 e-125
ref|XP_002265283.2| PREDICTED: putative transcription elongation... 235 e-124
ref|XP_003526672.1| PREDICTED: putative transcription elongation... 227 e-123
emb|CAN68098.1| hypothetical protein VITISV_043874 [Vitis vinifera] 235 e-123
>ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis]
gi|223534550|gb|EEF36249.1| suppressor of ty, putative
[Ricinus communis]
Length = 1045
Score = 239 bits (609), Expect(3) = e-127
Identities = 119/161 (73%), Positives = 143/161 (88%)
Frame = +3
Query: 3 KTLALSERELCKYFEPGNHVKVVSGATEGATGKVVTVERHLVNIVLDTTKKVIQVFSDNV 182
+T+A++E+ELCKYFEPGNHVKVVSG EGATG VV VE+H++ I+ DTTK+ I+VF+D+V
Sbjct: 464 RTIAVNEKELCKYFEPGNHVKVVSGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDV 523
Query: 183 VENSEVTSGKTRIRDYELHDLVLLDNMSFGVIIRVENEAFQVLKGVHERPEIAVVRLREI 362
VE+SEVT+G T+I DYELHDLVLLDNMSFGVIIRVE+EAFQVLKGV ERPE+A+VRLREI
Sbjct: 524 VESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGVPERPEVALVRLREI 583
Query: 363 KYKIERKNLAQDRSRNIIAVKDVVKVLDGPSKGKQGPVVHI 485
K KIE+K QDR +N IAVKDVV+++DGP KGKQGPV HI
Sbjct: 584 KCKIEKKFNVQDRYKNTIAVKDVVRIIDGPCKGKQGPVEHI 624
Score = 158 bits (400), Expect(3) = e-127
Identities = 70/80 (87%), Positives = 73/80 (91%), Gaps = 1/80 (1%)
Frame = +2
Query: 833 SETPMHPSRTPMHPYMTPMRDAGATPIHDGMRTPMLNRAWNPYTPKSPPRDNWEEGNPAS 1012
SETPMHPSRTP+HPYMTPMRDAGATPIHDGMRTPM +RAWNPY P SPPRDNWE+GNPAS
Sbjct: 776 SETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEDGNPAS 835
Query: 1013 WGTSPQYQLGS-PSRTYEAP 1069
WGTSP YQ GS PSR YEAP
Sbjct: 836 WGTSPHYQPGSPPSRAYEAP 855
Score = 108 bits (270), Expect(3) = e-127
Identities = 62/124 (50%), Positives = 79/124 (63%), Gaps = 12/124 (9%)
Frame = +1
Query: 466 KDLLFIYDCHHLEHAGLL--------VVGG-RANGDRNGDPTSRFA-LKPPSRVPQSPGR 615
K +LFIYD HHLEHAG + VVGG RANGDRNGD SRF+ K P RVPQSP R
Sbjct: 626 KGVLFIYDRHHLEHAGFICAKSHSCIVVGGTRANGDRNGDSYSRFSSFKTPPRVPQSPRR 685
Query: 616 MPXXXXXXXXXXXXXAR--GHNSLIGTSIRVRLGRYKDCKGIVKDVKGQTVRVELEAQMK 789
P GH++L+GT++++RLG +K +G V ++KG +VRVELE+QMK
Sbjct: 686 FPRGGPPFESGGRNRGGRGGHDALVGTTVKIRLGPFKGYRGRVVEIKGPSVRVELESQMK 745
Query: 790 DVTG 801
+ G
Sbjct: 746 VILG 749
Score = 108 bits (269), Expect = 5e-21
Identities = 48/88 (54%), Positives = 66/88 (75%)
Frame = +1
Query: 1243 YLPSTPGGQPPLTPSSAYLPRAXXXXXXXXXXXXLDMMSPVVGGDHEGPWFLPNILVTLR 1422
YLPSTPGGQP S+AYLP LD+MSPV+GGD+EGPW++P+ILV +R
Sbjct: 889 YLPSTPGGQPMTPSSAAYLPGTPGGQPMTPGTGGLDVMSPVIGGDNEGPWYMPDILVNVR 948
Query: 1423 RSADETSLGVVWELLPDGSCRVALGASG 1506
++AD++++GV+ ++L DGSCRV LGA+G
Sbjct: 949 KAADDSAIGVIRDVLADGSCRVVLGANG 976
>ref|XP_003634397.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like isoform 2 [Vitis vinifera]
Length = 1044
Score = 235 bits (599), Expect(3) = e-125
Identities = 115/161 (71%), Positives = 142/161 (88%)
Frame = +3
Query: 3 KTLALSERELCKYFEPGNHVKVVSGATEGATGKVVTVERHLVNIVLDTTKKVIQVFSDNV 182
KTLA++E+ELCKYFEPGNHVKVVSG EGATG VV VE H++ I+ DTTK+ ++VF+D+V
Sbjct: 457 KTLAVNEKELCKYFEPGNHVKVVSGTQEGATGMVVKVEGHVLIILSDTTKEHLRVFADDV 516
Query: 183 VENSEVTSGKTRIRDYELHDLVLLDNMSFGVIIRVENEAFQVLKGVHERPEIAVVRLREI 362
VE+SEVTSG TRI DYELHDLVLLDN+SFGVIIRVE+EAFQVLKGV +RPE+ +V+LREI
Sbjct: 517 VESSEVTSGVTRIGDYELHDLVLLDNLSFGVIIRVESEAFQVLKGVPDRPEVVLVKLREI 576
Query: 363 KYKIERKNLAQDRSRNIIAVKDVVKVLDGPSKGKQGPVVHI 485
K+KI+++ QDR +N ++VKDVV++LDGP KGKQGPV HI
Sbjct: 577 KFKIDKRVNVQDRFKNTVSVKDVVRILDGPCKGKQGPVEHI 617
Score = 152 bits (383), Expect(3) = e-125
Identities = 70/81 (86%), Positives = 72/81 (88%), Gaps = 2/81 (2%)
Frame = +2
Query: 833 SETPMHPSRTPMHPYMTPMRDAGATPIHDGMRTPMLNRAWNPYTPKSPPRDNWEEGNPAS 1012
SETPMHPSRTP+HPYMTPMRD GATPIHDGMRTPM +RAWNPY P SPPRDNWEEGNP S
Sbjct: 776 SETPMHPSRTPLHPYMTPMRDVGATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEEGNPDS 835
Query: 1013 W-GTSPQYQLGS-PSRTYEAP 1069
W TSPQYQ GS PSRTYEAP
Sbjct: 836 WVTTSPQYQPGSPPSRTYEAP 856
Score = 110 bits (274), Expect(3) = e-125
Identities = 65/125 (52%), Positives = 81/125 (64%), Gaps = 11/125 (8%)
Frame = +1
Query: 466 KDLLFIYDCHHLEHAGLL--------VVGG-RANGDRNGDPTSRFA-LKPPSRVPQSPGR 615
K +LFIYD HHLEHAG + VVGG R+N DR+GD SRFA L+ P RVP+SP R
Sbjct: 619 KGVLFIYDRHHLEHAGFICAKSHSCVVVGGSRSNADRSGDSFSRFANLRTPPRVPESPRR 678
Query: 616 MPXXXXXXXXXXXXXA-RGHNSLIGTSIRVRLGRYKDCKGIVKDVKGQTVRVELEAQMKD 792
P RGH+SLIG++I++R G +K +G V DV GQ+VRVELE+QMK
Sbjct: 679 FPRGGRPMDSGGRHRGGRGHDSLIGSTIKIRQGPFKGYRGRVVDVNGQSVRVELESQMKV 738
Query: 793 VTGSN 807
VTG +
Sbjct: 739 VTGKS 743
Score = 90.9 bits (224), Expect = 8e-16
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = +1
Query: 1243 YLPSTPGGQPPLTPSSAYLPRAXXXXXXXXXXXXLDMMSPVVGGDHEGPWFLPNILVTLR 1422
YLPSTPGGQP S +YLP +D+MSP+ GG+ EGPWF+P+ILV +R
Sbjct: 890 YLPSTPGGQPMTPNSVSYLP-GTPGGQPMTPGTGVDVMSPI-GGEQEGPWFMPDILVHIR 947
Query: 1423 RSADETSLGVVWELLPDGSCRVALGASG 1506
R +E +LGV+ E+LPDG+ RV LG+SG
Sbjct: 948 RPGEENTLGVIREVLPDGTYRVGLGSSG 975
>ref|XP_002265283.2| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like isoform 1 [Vitis vinifera]
gi|302142757|emb|CBI19960.3| unnamed protein product
[Vitis vinifera]
Length = 1034
Score = 235 bits (599), Expect(3) = e-124
Identities = 115/161 (71%), Positives = 142/161 (88%)
Frame = +3
Query: 3 KTLALSERELCKYFEPGNHVKVVSGATEGATGKVVTVERHLVNIVLDTTKKVIQVFSDNV 182
KTLA++E+ELCKYFEPGNHVKVVSG EGATG VV VE H++ I+ DTTK+ ++VF+D+V
Sbjct: 457 KTLAVNEKELCKYFEPGNHVKVVSGTQEGATGMVVKVEGHVLIILSDTTKEHLRVFADDV 516
Query: 183 VENSEVTSGKTRIRDYELHDLVLLDNMSFGVIIRVENEAFQVLKGVHERPEIAVVRLREI 362
VE+SEVTSG TRI DYELHDLVLLDN+SFGVIIRVE+EAFQVLKGV +RPE+ +V+LREI
Sbjct: 517 VESSEVTSGVTRIGDYELHDLVLLDNLSFGVIIRVESEAFQVLKGVPDRPEVVLVKLREI 576
Query: 363 KYKIERKNLAQDRSRNIIAVKDVVKVLDGPSKGKQGPVVHI 485
K+KI+++ QDR +N ++VKDVV++LDGP KGKQGPV HI
Sbjct: 577 KFKIDKRVNVQDRFKNTVSVKDVVRILDGPCKGKQGPVEHI 617
Score = 152 bits (383), Expect(3) = e-124
Identities = 70/81 (86%), Positives = 72/81 (88%), Gaps = 2/81 (2%)
Frame = +2
Query: 833 SETPMHPSRTPMHPYMTPMRDAGATPIHDGMRTPMLNRAWNPYTPKSPPRDNWEEGNPAS 1012
SETPMHPSRTP+HPYMTPMRD GATPIHDGMRTPM +RAWNPY P SPPRDNWEEGNP S
Sbjct: 766 SETPMHPSRTPLHPYMTPMRDVGATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEEGNPDS 825
Query: 1013 W-GTSPQYQLGS-PSRTYEAP 1069
W TSPQYQ GS PSRTYEAP
Sbjct: 826 WVTTSPQYQPGSPPSRTYEAP 846
Score = 107 bits (267), Expect(3) = e-124
Identities = 64/122 (52%), Positives = 79/122 (64%), Gaps = 11/122 (9%)
Frame = +1
Query: 466 KDLLFIYDCHHLEHAGLL--------VVGG-RANGDRNGDPTSRFA-LKPPSRVPQSPGR 615
K +LFIYD HHLEHAG + VVGG R+N DR+GD SRFA L+ P RVP+SP R
Sbjct: 619 KGVLFIYDRHHLEHAGFICAKSHSCVVVGGSRSNADRSGDSFSRFANLRTPPRVPESPRR 678
Query: 616 MPXXXXXXXXXXXXXA-RGHNSLIGTSIRVRLGRYKDCKGIVKDVKGQTVRVELEAQMKD 792
P RGH+SLIG++I++R G +K +G V DV GQ+VRVELE+QMK
Sbjct: 679 FPRGGRPMDSGGRHRGGRGHDSLIGSTIKIRQGPFKGYRGRVVDVNGQSVRVELESQMKV 738
Query: 793 VT 798
VT
Sbjct: 739 VT 740
Score = 90.9 bits (224), Expect = 8e-16
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = +1
Query: 1243 YLPSTPGGQPPLTPSSAYLPRAXXXXXXXXXXXXLDMMSPVVGGDHEGPWFLPNILVTLR 1422
YLPSTPGGQP S +YLP +D+MSP+ GG+ EGPWF+P+ILV +R
Sbjct: 880 YLPSTPGGQPMTPNSVSYLP-GTPGGQPMTPGTGVDVMSPI-GGEQEGPWFMPDILVHIR 937
Query: 1423 RSADETSLGVVWELLPDGSCRVALGASG 1506
R +E +LGV+ E+LPDG+ RV LG+SG
Sbjct: 938 RPGEENTLGVIREVLPDGTYRVGLGSSG 965
>ref|XP_003526672.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like [Glycine max]
Length = 1039
Score = 227 bits (579), Expect(3) = e-123
Identities = 110/161 (68%), Positives = 140/161 (86%)
Frame = +3
Query: 3 KTLALSERELCKYFEPGNHVKVVSGATEGATGKVVTVERHLVNIVLDTTKKVIQVFSDNV 182
KT+A++E+ELCKYFEPGNHVKVVSGA EGATG VV VE+H++ ++ DTTK+ I+VF+D+V
Sbjct: 465 KTIAVNEKELCKYFEPGNHVKVVSGAQEGATGMVVKVEQHVLILISDTTKEHIRVFADDV 524
Query: 183 VENSEVTSGKTRIRDYELHDLVLLDNMSFGVIIRVENEAFQVLKGVHERPEIAVVRLREI 362
VE+SEVT+G TRI DYEL DLVLLDN SFGVIIRVE+EAFQVLKG+ +RPE+ +++LREI
Sbjct: 525 VESSEVTTGVTRIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGIPDRPEVVLIKLREI 584
Query: 363 KYKIERKNLAQDRSRNIIAVKDVVKVLDGPSKGKQGPVVHI 485
K KI++K QDR +N ++ KDVV+++DGP KGKQGPV HI
Sbjct: 585 KCKIDKKISVQDRFKNTVSSKDVVRIVDGPCKGKQGPVEHI 625
Score = 156 bits (394), Expect(3) = e-123
Identities = 69/80 (86%), Positives = 72/80 (90%), Gaps = 1/80 (1%)
Frame = +2
Query: 833 SETPMHPSRTPMHPYMTPMRDAGATPIHDGMRTPMLNRAWNPYTPKSPPRDNWEEGNPAS 1012
SETPMHPSRTP+HPYMTPMRD GATPIHDGMRTPM +RAWNPYTP SPPRDNWE+GNP S
Sbjct: 772 SETPMHPSRTPLHPYMTPMRDPGATPIHDGMRTPMHSRAWNPYTPMSPPRDNWEDGNPGS 831
Query: 1013 WGTSPQYQLGS-PSRTYEAP 1069
WG SPQYQ GS PSR YEAP
Sbjct: 832 WGASPQYQPGSPPSRPYEAP 851
Score = 109 bits (273), Expect(3) = e-123
Identities = 63/121 (52%), Positives = 78/121 (64%), Gaps = 10/121 (8%)
Frame = +1
Query: 466 KDLLFIYDCHHLEHAGLL--------VVGG-RANGDRNGDPTSRFA-LKPPSRVPQSPGR 615
+ +LFI+D HHLEHAG + VVGG R++G+RNGD SRFA L+ PSR+P SP R
Sbjct: 627 RGILFIFDRHHLEHAGFICAKAQSCVVVGGSRSSGERNGDAYSRFASLRSPSRIPPSPRR 686
Query: 616 MPXXXXXXXXXXXXXARGHNSLIGTSIRVRLGRYKDCKGIVKDVKGQTVRVELEAQMKDV 795
RGH+SL GT+++VR G YK +G V DVKG TVRVELE+QMK V
Sbjct: 687 FSRGGPMDSGGRHRGGRGHDSLAGTTVKVRQGPYKGYRGRVIDVKGTTVRVELESQMKVV 746
Query: 796 T 798
T
Sbjct: 747 T 747
Score = 99.8 bits (247), Expect = 2e-18
Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Frame = +1
Query: 1243 YLPSTPGGQPPLTPSSA-YLPRAXXXXXXXXXXXXLDMMSPVVGGDHEGPWFLPNILVTL 1419
YLPSTPGGQP +TPSSA YLP +DMMSPV+GG++EGPWF+P+ILV +
Sbjct: 884 YLPSTPGGQP-MTPSSASYLPGTPGGQPMTPGTGGMDMMSPVLGGENEGPWFIPDILVNV 942
Query: 1420 RRSADETSLGVVWELLPDGSCRVALGASG 1506
R+ +E S+GV+ E LPDGS RV LG+SG
Sbjct: 943 HRAGEE-SIGVIREALPDGSYRVGLGSSG 970
>emb|CAN68098.1| hypothetical protein VITISV_043874 [Vitis vinifera]
Length = 1107
Score = 235 bits (599), Expect(3) = e-123
Identities = 115/161 (71%), Positives = 142/161 (88%)
Frame = +3
Query: 3 KTLALSERELCKYFEPGNHVKVVSGATEGATGKVVTVERHLVNIVLDTTKKVIQVFSDNV 182
KTLA++E+ELCKYFEPGNHVKVVSG EGATG VV VE H++ I+ DTTK+ ++VF+D+V
Sbjct: 457 KTLAVNEKELCKYFEPGNHVKVVSGTQEGATGMVVKVEGHVLIILSDTTKEHLRVFADDV 516
Query: 183 VENSEVTSGKTRIRDYELHDLVLLDNMSFGVIIRVENEAFQVLKGVHERPEIAVVRLREI 362
VE+SEVTSG TRI DYELHDLVLLDN+SFGVIIRVE+EAFQVLKGV +RPE+ +V+LREI
Sbjct: 517 VESSEVTSGVTRIGDYELHDLVLLDNLSFGVIIRVESEAFQVLKGVPDRPEVVLVKLREI 576
Query: 363 KYKIERKNLAQDRSRNIIAVKDVVKVLDGPSKGKQGPVVHI 485
K+KI+++ QDR +N ++VKDVV++LDGP KGKQGPV HI
Sbjct: 577 KFKIDKRVNVQDRFKNTVSVKDVVRILDGPCKGKQGPVEHI 617
Score = 152 bits (384), Expect(3) = e-123
Identities = 70/81 (86%), Positives = 72/81 (88%), Gaps = 2/81 (2%)
Frame = +2
Query: 833 SETPMHPSRTPMHPYMTPMRDAGATPIHDGMRTPMLNRAWNPYTPKSPPRDNWEEGNPAS 1012
SETPMHPSRTP+HPYMTPMRD GATPIHDGMRTPM +RAWNPY P SPPRDNWEEGNP S
Sbjct: 775 SETPMHPSRTPLHPYMTPMRDVGATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEEGNPDS 834
Query: 1013 W-GTSPQYQLGS-PSRTYEAP 1069
W TSPQYQ GS PSRTYEAP
Sbjct: 835 WVXTSPQYQPGSPPSRTYEAP 855
Score = 105 bits (261), Expect(3) = e-123
Identities = 62/119 (52%), Positives = 77/119 (64%), Gaps = 11/119 (9%)
Frame = +1
Query: 466 KDLLFIYDCHHLEHAGLL--------VVGG-RANGDRNGDPTSRFA-LKPPSRVPQSPGR 615
K +LFIYD HHLEHAG + VVGG R+N DR+GD SRFA L+ P RVP+SP R
Sbjct: 619 KGVLFIYDRHHLEHAGFICAKSHSCVVVGGSRSNADRSGDSFSRFANLRTPPRVPESPRR 678
Query: 616 MPXXXXXXXXXXXXXA-RGHNSLIGTSIRVRLGRYKDCKGIVKDVKGQTVRVELEAQMK 789
P RGH+SLIG++I++R G +K +G V DV GQ+VRVELE+QMK
Sbjct: 679 FPRGGRPMDSGGRHRGGRGHDSLIGSTIKIRQGPFKGYRGRVVDVNGQSVRVELESQMK 737
Score = 78.2 bits (191), Expect = 5e-12
Identities = 46/110 (41%), Positives = 60/110 (54%), Gaps = 22/110 (20%)
Frame = +1
Query: 1243 YLPSTPGGQPPLTPSSAYLPRAXXXXXXXXXXXXLDMMSPVVGGDHEGPWFLPNILVTLR 1422
YLPSTPGGQP S +YLP +D+MSP+ GG+ EGPWF+P+ILV +R
Sbjct: 889 YLPSTPGGQPMTPNSVSYLP-GTPGGQPMTPGTGVDVMSPI-GGEQEGPWFMPDILVHIR 946
Query: 1423 RSADETSLGVVWELLP----------------------DGSCRVALGASG 1506
R +E +LGV+ E+LP DG+ RV LG+SG
Sbjct: 947 RPGEENTLGVIREVLPHASGMGIFHWLSGSINKCFVVQDGTYRVGLGSSG 996