BLASTX nr result

ID: Cnidium21_contig00002599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002599
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB55361.1| 40S ribosomal protein S10-like [Solanum tuberosum...   218   2e-54
gb|ABB55398.1| 40S ribosomal protein S10-like [Solanum tuberosum]     216   5e-54
emb|CBI22651.3| unnamed protein product [Vitis vinifera]              216   5e-54
ref|XP_002278759.1| PREDICTED: 40S ribosomal protein S10-like [V...   214   2e-53
ref|XP_002273286.2| PREDICTED: 40S ribosomal protein S10-like [V...   214   2e-53

>gb|ABB55361.1| 40S ribosomal protein S10-like [Solanum tuberosum]
           gi|82400160|gb|ABB72819.1| 40S ribosomal protein
           S10-like protein [Solanum tuberosum]
          Length = 180

 Score =  218 bits (554), Expect = 2e-54
 Identities = 105/129 (81%), Positives = 110/129 (85%)
 Frame = +2

Query: 65  MIITEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 244
           MII+EKNRREISKYLFQEGVC+AKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPNIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 245 WMHYYWYLTNDGIEFLRTYLNLPSDIVPSTLKKSAKXXXXXXXXXXXXXXXXXXXFEGDR 424
           WMHYYWYLTNDGIEFLRTYLNLPS+IVP+TLKKSAK                   FEGDR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGDRPRGPPRFEGDR 120

Query: 425 PRFGDRDGY 451
           PRFGDRDGY
Sbjct: 121 PRFGDRDGY 129


>gb|ABB55398.1| 40S ribosomal protein S10-like [Solanum tuberosum]
          Length = 182

 Score =  216 bits (550), Expect = 5e-54
 Identities = 105/129 (81%), Positives = 109/129 (84%)
 Frame = +2

Query: 65  MIITEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 244
           MII+EKNRREISKYLFQEGVCYAKKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 245 WMHYYWYLTNDGIEFLRTYLNLPSDIVPSTLKKSAKXXXXXXXXXXXXXXXXXXXFEGDR 424
           WMHYYWYLTNDGIEFLRTYLNLPS+IVP+TLKKSAK                   FEGDR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGDRPRGPPRFEGDR 120

Query: 425 PRFGDRDGY 451
           PR+GDRDGY
Sbjct: 121 PRYGDRDGY 129


>emb|CBI22651.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score =  216 bits (550), Expect = 5e-54
 Identities = 104/129 (80%), Positives = 108/129 (83%)
 Frame = +2

Query: 65  MIITEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 244
           MII EKNRREISKYLFQEGVCYAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 36  MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 95

Query: 245 WMHYYWYLTNDGIEFLRTYLNLPSDIVPSTLKKSAKXXXXXXXXXXXXXXXXXXXFEGDR 424
           WMHYYWYLTNDGIEFLRTYLNLPS+IVP+TLKKS K                   F+GDR
Sbjct: 96  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSVKPPGRPMGGPPGDRPRGPPRFDGDR 155

Query: 425 PRFGDRDGY 451
           PRFGDRDGY
Sbjct: 156 PRFGDRDGY 164


>ref|XP_002278759.1| PREDICTED: 40S ribosomal protein S10-like [Vitis vinifera]
          Length = 180

 Score =  214 bits (546), Expect = 2e-53
 Identities = 106/129 (82%), Positives = 108/129 (83%)
 Frame = +2

Query: 65  MIITEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 244
           MII EKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 245 WMHYYWYLTNDGIEFLRTYLNLPSDIVPSTLKKSAKXXXXXXXXXXXXXXXXXXXFEGDR 424
           WMHYYWYLTNDGIEFLRTYLNLPS+IVP+TLKKS K                   FEGDR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSVK-PAGRPMGPPGDRPRGPPRFEGDR 119

Query: 425 PRFGDRDGY 451
           PRFGDRDGY
Sbjct: 120 PRFGDRDGY 128


>ref|XP_002273286.2| PREDICTED: 40S ribosomal protein S10-like [Vitis vinifera]
          Length = 187

 Score =  214 bits (545), Expect = 2e-53
 Identities = 103/128 (80%), Positives = 107/128 (83%)
 Frame = +2

Query: 68  IITEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAW 247
           II EKNRREISKYLFQEGVCYAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 9   IIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 68

Query: 248 MHYYWYLTNDGIEFLRTYLNLPSDIVPSTLKKSAKXXXXXXXXXXXXXXXXXXXFEGDRP 427
           MHYYWYLTNDGIEFLRTYLNLPS+IVP+TLKKS K                   F+GDRP
Sbjct: 69  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSVKPPGRPMGGPPGDRPRGPPRFDGDRP 128

Query: 428 RFGDRDGY 451
           RFGDRDGY
Sbjct: 129 RFGDRDGY 136


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