BLASTX nr result

ID: Cnidium21_contig00002587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002587
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302516.1| predicted protein [Populus trichocarpa] gi|2...   415   e-113
ref|XP_002511646.1| F-box/LRR-repeat protein, putative [Ricinus ...   409   e-111
ref|XP_002326818.1| predicted protein [Populus trichocarpa] gi|2...   408   e-111
emb|CBI16593.3| unnamed protein product [Vitis vinifera]              404   e-110
ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vi...   404   e-110

>ref|XP_002302516.1| predicted protein [Populus trichocarpa] gi|222844242|gb|EEE81789.1|
            predicted protein [Populus trichocarpa]
          Length = 450

 Score =  415 bits (1067), Expect = e-113
 Identities = 193/260 (74%), Positives = 228/260 (87%)
 Frame = -2

Query: 1211 LYCCCDFVLRGISKCRNLQILKLVGCIDGFYDSVVSDIGLTILAQGCRRLVQLELVGCEG 1032
            L+CC D  L+GIS CRNLQ+LKL+GC+DGFY+SVVSDIGLTILAQGCRRLV+LEL GCEG
Sbjct: 186  LHCCGDMSLKGISGCRNLQVLKLIGCVDGFYNSVVSDIGLTILAQGCRRLVKLELCGCEG 245

Query: 1031 SFDGIKAVGQCCEMLEELTLCDHRMDGGWLAALSYCGNLKTLKLKSCKSIDSSPGPDEHL 852
            S+DGIKA+GQCC+MLEELT+CDHRMDGGWLAALS+C NLKTL+L+SCKS+DSSPG  EHL
Sbjct: 246  SYDGIKAIGQCCQMLEELTICDHRMDGGWLAALSFCENLKTLRLQSCKSVDSSPGLLEHL 305

Query: 851  SYCPTLEELHLQHCQMRDKQGVRALFIACQTIRDLVIEDCWGLDNLTFAYASICRRVRLL 672
              CPTLEELH+Q CQMRDKQ V+ALF+ C+T+R++V+++CW L++  FA AS+CRRVRLL
Sbjct: 306  GSCPTLEELHVQRCQMRDKQAVKALFLVCKTVREIVLQNCWRLEDEVFAAASVCRRVRLL 365

Query: 671  SLEGCSLLTMDGFDPVVLSWKELNRLKVISCNNINDGEITIELATLFSSLKELKWRPDSR 492
            SLEGCSLLT  G + V+L+WKEL RL V S NNI D EIT +LATLFS LKELKWRPDSR
Sbjct: 366  SLEGCSLLTTGGLESVILNWKELQRLTVTSSNNIKDSEITPDLATLFSVLKELKWRPDSR 425

Query: 491  SILLSGLSGTGVGQRGGRSF 432
            S+L SGL+GTGVG +GGR F
Sbjct: 426  SLLSSGLAGTGVGNKGGRFF 445


>ref|XP_002511646.1| F-box/LRR-repeat protein, putative [Ricinus communis]
            gi|223548826|gb|EEF50315.1| F-box/LRR-repeat protein,
            putative [Ricinus communis]
          Length = 459

 Score =  409 bits (1050), Expect = e-111
 Identities = 189/260 (72%), Positives = 224/260 (86%)
 Frame = -2

Query: 1211 LYCCCDFVLRGISKCRNLQILKLVGCIDGFYDSVVSDIGLTILAQGCRRLVQLELVGCEG 1032
            L+CC DF L+GIS C NLQ++KLVGC+D FY SVVSDIGLTILAQGC+RLV+LEL GCEG
Sbjct: 195  LHCCGDFALKGISGCTNLQVVKLVGCVDVFYYSVVSDIGLTILAQGCKRLVKLELCGCEG 254

Query: 1031 SFDGIKAVGQCCEMLEELTLCDHRMDGGWLAALSYCGNLKTLKLKSCKSIDSSPGPDEHL 852
            S+DGIKA+GQCC+MLEELT+ DHRMDGGWLAALS+CGNLKTL LK+CKSIDSSPGPDEHL
Sbjct: 255  SYDGIKAIGQCCQMLEELTISDHRMDGGWLAALSFCGNLKTLTLKTCKSIDSSPGPDEHL 314

Query: 851  SYCPTLEELHLQHCQMRDKQGVRALFIACQTIRDLVIEDCWGLDNLTFAYASICRRVRLL 672
              CPTLEELHLQ CQMRDK GV+ALF  C+ +R++V ++CWGL++  F+ AS+CRRVRLL
Sbjct: 315  GSCPTLEELHLQQCQMRDKLGVKALFSVCEAVREIVFQNCWGLEDEVFSTASVCRRVRLL 374

Query: 671  SLEGCSLLTMDGFDPVVLSWKELNRLKVISCNNINDGEITIELATLFSSLKELKWRPDSR 492
            SLEGCS LT  G + V+L+WKEL RL+V+SCN I D E++  LA+LFS LKELKWRPDSR
Sbjct: 375  SLEGCSSLTTGGLEAVILNWKELQRLRVMSCNKIKDNEVSPALASLFSVLKELKWRPDSR 434

Query: 491  SILLSGLSGTGVGQRGGRSF 432
            S+L S L+GTGVG +GGR F
Sbjct: 435  SLLSSSLAGTGVGNKGGRFF 454


>ref|XP_002326818.1| predicted protein [Populus trichocarpa] gi|222835133|gb|EEE73568.1|
            predicted protein [Populus trichocarpa]
          Length = 413

 Score =  408 bits (1049), Expect = e-111
 Identities = 189/260 (72%), Positives = 227/260 (87%)
 Frame = -2

Query: 1211 LYCCCDFVLRGISKCRNLQILKLVGCIDGFYDSVVSDIGLTILAQGCRRLVQLELVGCEG 1032
            L+CC D  L+GIS CRNLQ+LKL+GC+DGF++S+VSDIGLTILAQGCRRLV+LEL GCEG
Sbjct: 149  LHCCGDMSLKGISGCRNLQVLKLIGCVDGFFNSMVSDIGLTILAQGCRRLVKLELCGCEG 208

Query: 1031 SFDGIKAVGQCCEMLEELTLCDHRMDGGWLAALSYCGNLKTLKLKSCKSIDSSPGPDEHL 852
            S+DGIKA+GQCC+MLEELT+ DHRMDGGWLAAL +C NLKTL+L+SCKSIDSSPG  EHL
Sbjct: 209  SYDGIKAIGQCCQMLEELTIRDHRMDGGWLAALLFCENLKTLRLQSCKSIDSSPGLPEHL 268

Query: 851  SYCPTLEELHLQHCQMRDKQGVRALFIACQTIRDLVIEDCWGLDNLTFAYASICRRVRLL 672
              CPTLEELHLQ CQMRDKQ V+ALF+ C+T+R++V+++CWGL++  FA A++CRR RLL
Sbjct: 269  GSCPTLEELHLQQCQMRDKQAVKALFLICKTVREIVLQNCWGLEDEVFATATVCRRARLL 328

Query: 671  SLEGCSLLTMDGFDPVVLSWKELNRLKVISCNNINDGEITIELATLFSSLKELKWRPDSR 492
            SLEGCSLLT    + V+L+WKEL RL VISCNNI D EIT +LATLFS LKELKWRPDS+
Sbjct: 329  SLEGCSLLTTGCLESVILNWKELERLTVISCNNIKDSEITPDLATLFSVLKELKWRPDSK 388

Query: 491  SILLSGLSGTGVGQRGGRSF 432
            S+L +GL+GTGVG +GGR F
Sbjct: 389  SLLSAGLAGTGVGNKGGRFF 408


>emb|CBI16593.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  404 bits (1039), Expect = e-110
 Identities = 187/262 (71%), Positives = 224/262 (85%)
 Frame = -2

Query: 1211 LYCCCDFVLRGISKCRNLQILKLVGCIDGFYDSVVSDIGLTILAQGCRRLVQLELVGCEG 1032
            L+ C D  LRGIS C+NLQILKL+G +   Y+SV+SDIGLTILAQGCRRLV+LEL GCEG
Sbjct: 83   LHYCTDLSLRGISGCQNLQILKLIGSVRELYNSVISDIGLTILAQGCRRLVKLELCGCEG 142

Query: 1031 SFDGIKAVGQCCEMLEELTLCDHRMDGGWLAALSYCGNLKTLKLKSCKSIDSSPGPDEHL 852
            S+DGIKA+GQCC+MLEELTLCDHRMDGGWL+ALS+CGNLKTLKL+SCKSID+SPG D+HL
Sbjct: 143  SYDGIKAIGQCCQMLEELTLCDHRMDGGWLSALSFCGNLKTLKLQSCKSIDASPGSDQHL 202

Query: 851  SYCPTLEELHLQHCQMRDKQGVRALFIACQTIRDLVIEDCWGLDNLTFAYASICRRVRLL 672
              CPTLE LHLQ CQMRDKQ  RALF+ C+ +R++V++DCWGL++ TF  A+ICRR++ L
Sbjct: 203  GSCPTLETLHLQRCQMRDKQSTRALFLVCEAVREIVLQDCWGLEDETFGIATICRRLKSL 262

Query: 671  SLEGCSLLTMDGFDPVVLSWKELNRLKVISCNNINDGEITIELATLFSSLKELKWRPDSR 492
            SLEGCSLLT++G D VV SWKEL RL+V+SCNNI D E+T  LATLFS LKELKWRPDSR
Sbjct: 263  SLEGCSLLTVEGLDSVVHSWKELQRLRVVSCNNIKDSEVTPALATLFSVLKELKWRPDSR 322

Query: 491  SILLSGLSGTGVGQRGGRSFSR 426
            S+L S L  TG+G++GG+ F R
Sbjct: 323  SLLSSSLGETGMGKKGGKFFKR 344


>ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vinifera]
          Length = 473

 Score =  404 bits (1039), Expect = e-110
 Identities = 187/262 (71%), Positives = 224/262 (85%)
 Frame = -2

Query: 1211 LYCCCDFVLRGISKCRNLQILKLVGCIDGFYDSVVSDIGLTILAQGCRRLVQLELVGCEG 1032
            L+ C D  LRGIS C+NLQILKL+G +   Y+SV+SDIGLTILAQGCRRLV+LEL GCEG
Sbjct: 211  LHYCTDLSLRGISGCQNLQILKLIGSVRELYNSVISDIGLTILAQGCRRLVKLELCGCEG 270

Query: 1031 SFDGIKAVGQCCEMLEELTLCDHRMDGGWLAALSYCGNLKTLKLKSCKSIDSSPGPDEHL 852
            S+DGIKA+GQCC+MLEELTLCDHRMDGGWL+ALS+CGNLKTLKL+SCKSID+SPG D+HL
Sbjct: 271  SYDGIKAIGQCCQMLEELTLCDHRMDGGWLSALSFCGNLKTLKLQSCKSIDASPGSDQHL 330

Query: 851  SYCPTLEELHLQHCQMRDKQGVRALFIACQTIRDLVIEDCWGLDNLTFAYASICRRVRLL 672
              CPTLE LHLQ CQMRDKQ  RALF+ C+ +R++V++DCWGL++ TF  A+ICRR++ L
Sbjct: 331  GSCPTLETLHLQRCQMRDKQSTRALFLVCEAVREIVLQDCWGLEDETFGIATICRRLKSL 390

Query: 671  SLEGCSLLTMDGFDPVVLSWKELNRLKVISCNNINDGEITIELATLFSSLKELKWRPDSR 492
            SLEGCSLLT++G D VV SWKEL RL+V+SCNNI D E+T  LATLFS LKELKWRPDSR
Sbjct: 391  SLEGCSLLTVEGLDSVVHSWKELQRLRVVSCNNIKDSEVTPALATLFSVLKELKWRPDSR 450

Query: 491  SILLSGLSGTGVGQRGGRSFSR 426
            S+L S L  TG+G++GG+ F R
Sbjct: 451  SLLSSSLGETGMGKKGGKFFKR 472



 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 6/205 (2%)
 Frame = -2

Query: 1109 VSDIGLTILAQGCRRLVQLELVGCEGSFDGIKAVGQCCEMLEELTLCDHRMDGGWLAALS 930
            V D GL I+A+GC  L +L L+G   S  G+ +V   C  L+EL L  H      L  +S
Sbjct: 168  VIDEGLRIVAEGCPNLRKLVLIG--ASEKGLSSVATECLTLQELEL--HYCTDLSLRGIS 223

Query: 929  YCGNLKTLKL-----KSCKSIDSSPGPDEHLSYCPTLEELHLQHCQMRDKQGVRALFIAC 765
             C NL+ LKL     +   S+ S  G       C  L +L L  C+     G++A+   C
Sbjct: 224  GCQNLQILKLIGSVRELYNSVISDIGLTILAQGCRRLVKLELCGCE-GSYDGIKAIGQCC 282

Query: 764  QTIRDLVIEDCWGLDNLTFAYASICRRVRLLSLEGC-SLLTMDGFDPVVLSWKELNRLKV 588
            Q + +L + D   +D    +  S C  ++ L L+ C S+    G D  + S   L  L +
Sbjct: 283  QMLEELTLCD-HRMDGGWLSALSFCGNLKTLKLQSCKSIDASPGSDQHLGSCPTLETLHL 341

Query: 587  ISCNNINDGEITIELATLFSSLKEL 513
              C  + D + T  L  +  +++E+
Sbjct: 342  QRC-QMRDKQSTRALFLVCEAVREI 365


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