BLASTX nr result

ID: Cnidium21_contig00002486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002486
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330602.1| predicted protein [Populus trichocarpa] gi|2...   112   7e-27
ref|XP_002263998.1| PREDICTED: 2-succinylbenzoate--CoA ligase, c...   106   2e-26
emb|CAN63633.1| hypothetical protein VITISV_009387 [Vitis vinifera]   106   6e-26
ref|XP_003594530.1| 2-succinylbenzoate-CoA ligase [Medicago trun...   103   4e-23
ref|XP_003546260.1| PREDICTED: 2-succinylbenzoate--CoA ligase, c...    99   1e-22

>ref|XP_002330602.1| predicted protein [Populus trichocarpa] gi|222872160|gb|EEF09291.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score =  112 bits (280), Expect(2) = 7e-27
 Identities = 57/98 (58%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
 Frame = +1

Query: 76  RTTETRDRLLSVKKILNGGGSLSVELLKDAIQIFPRSKILSAYGMTEACSSLTFMTLYDS 255
           R  ET      VKK+LNGGGSLS EL+KDA ++FPR+K+LSAYGMTE CSSLTFMTL+D 
Sbjct: 305 RLKETWKGRQYVKKLLNGGGSLSAELMKDATELFPRAKLLSAYGMTETCSSLTFMTLHDP 364

Query: 256 TKENPDQSF--IKEETKSKLHELRGVCVGKTAPHVELE 363
           T + P Q+   + +   S  H+  GVCVGK  PHVEL+
Sbjct: 365 TLQTPAQTLQTVDKTKSSSAHQPHGVCVGKPPPHVELK 402



 Score = 33.1 bits (74), Expect(2) = 7e-27
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +3

Query: 3   QHKVTSLITVPAMLVDMVSV 62
           QH VTSLITVPAM+ D++S+
Sbjct: 284 QHCVTSLITVPAMMADLISL 303


>ref|XP_002263998.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
           chloroplastic/peroxisomal isoform 1 [Vitis vinifera]
           gi|297740839|emb|CBI31021.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score =  106 bits (264), Expect(2) = 2e-26
 Identities = 57/88 (64%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
 Frame = +1

Query: 106 SVKKILNGGGSLSVELLKDAIQIFPRSKILSAYGMTEACSSLTFMTLYDSTKENPDQSF- 282
           SVKKILNGGG LS  L++DAI+ FPR+KILSAYGMTE CSSLTFMTLYD T  +  Q+  
Sbjct: 289 SVKKILNGGGGLSNGLIEDAIKFFPRAKILSAYGMTETCSSLTFMTLYDPTCASSRQALQ 348

Query: 283 -IKEETKSKLHELRGVCVGKTAPHVELE 363
              E   S  H   GVCVGK APHVEL+
Sbjct: 349 EFVEIKSSSFHLPEGVCVGKPAPHVELK 376



 Score = 37.7 bits (86), Expect(2) = 2e-26
 Identities = 18/37 (48%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
 Frame = +3

Query: 3   QHKVTSLITVPAMLVDMVSVISF---WQDDRNTRQII 104
           QH VTSLITVPA++VD+VS+I     W+   + ++I+
Sbjct: 258 QHHVTSLITVPAIMVDLVSIIRMKMTWKVTESVKKIL 294


>emb|CAN63633.1| hypothetical protein VITISV_009387 [Vitis vinifera]
          Length = 520

 Score =  106 bits (264), Expect(2) = 6e-26
 Identities = 57/88 (64%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
 Frame = +1

Query: 106 SVKKILNGGGSLSVELLKDAIQIFPRSKILSAYGMTEACSSLTFMTLYDSTKENPDQSF- 282
           SVKKILNGGG LS  L++DAI+ FPR+KILSAYGMTE CSSLTFMTLYD T  +  Q+  
Sbjct: 286 SVKKILNGGGGLSNGLIEDAIKFFPRAKILSAYGMTETCSSLTFMTLYDPTCASSRQALQ 345

Query: 283 -IKEETKSKLHELRGVCVGKTAPHVELE 363
              E   S  H   GVCVGK APHVEL+
Sbjct: 346 EFVEIKSSSFHLPEGVCVGKPAPHVELK 373



 Score = 36.2 bits (82), Expect(2) = 6e-26
 Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
 Frame = +3

Query: 3   QHKVTSLITVPAMLVDMVSVISF---WQDDRNTRQII 104
           QH VTSLITVPA++ D+VS+I     W+   + ++I+
Sbjct: 255 QHHVTSLITVPAIMADLVSIIRMKMTWKVTESVKKIL 291


>ref|XP_003594530.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
           gi|355483578|gb|AES64781.1| 2-succinylbenzoate-CoA
           ligase [Medicago truncatula]
          Length = 562

 Score =  103 bits (256), Expect(2) = 4e-23
 Identities = 55/97 (56%), Positives = 71/97 (73%), Gaps = 11/97 (11%)
 Frame = +1

Query: 106 SVKKILNGGGSLSVELLKDAIQIFPRSKILSAYG--------MTEACSSLTFMTLYD--- 252
           +VKKILNGGGSLS EL+KD    F ++K++SAYG        MTEACSSLTF+TLYD   
Sbjct: 283 TVKKILNGGGSLSFELIKDTHIFFHKAKLISAYGRSFLTQCWMTEACSSLTFLTLYDPMQ 342

Query: 253 STKENPDQSFIKEETKSKLHELRGVCVGKTAPHVELE 363
            T  +P Q++ +EE+K  +H+ +GVCVGK APHVEL+
Sbjct: 343 KTISHPFQTYGEEESKHLIHQPQGVCVGKAAPHVELK 379



 Score = 29.6 bits (65), Expect(2) = 4e-23
 Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
 Frame = +3

Query: 3   QHKVTSLITVPAMLVDMVSVI---SFWQDDRNTRQII 104
           ++ VTSLITVPA++  ++S++     W+     ++I+
Sbjct: 252 RYNVTSLITVPAIMTSLISIVRRKETWKGGETVKKIL 288


>ref|XP_003546260.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
           chloroplastic/peroxisomal-like isoform 1 [Glycine max]
          Length = 560

 Score = 99.4 bits (246), Expect(2) = 1e-22
 Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
 Frame = +1

Query: 106 SVKKILNGGGSLSVELLKDAIQIFPRSKILSAYGMTEACSSLTFMTLYDSTKENPDQSF- 282
           +VKKILNGGGSLS EL+KD    F ++K++SAYGMTE CSSLTF+TLYD   E  +QS  
Sbjct: 287 TVKKILNGGGSLSHELIKDTSIFFHKAKLISAYGMTETCSSLTFLTLYDPMHETTNQSLQ 346

Query: 283 -IKEETKSKLHELRGVCVGKTAPHVELE 363
                    +H+ +GVC+GK APH+EL+
Sbjct: 347 AFGVAGSKLIHQQQGVCIGKAAPHIELK 374



 Score = 32.0 bits (71), Expect(2) = 1e-22
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = +3

Query: 3   QHKVTSLITVPAMLVDMVSVI---SFWQDDRNTRQII 104
           QH VTS ITVPA++  ++S+I     W+     ++I+
Sbjct: 256 QHAVTSFITVPAIMASLISIIRHKETWKGGETVKKIL 292


Top