BLASTX nr result

ID: Cnidium21_contig00002484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002484
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]         250   2e-64
ref|XP_002527284.1| Photosystem I reaction center subunit XI, ch...   243   3e-62
gb|ACG24344.1| photosystem I reaction center subunit XI [Zea mays]    240   2e-61
ref|NP_193016.1| photosystem I reaction center subunit XI [Arabi...   240   2e-61
sp|Q41385.1|PSAL_SPIOL RecName: Full=Photosystem I reaction cent...   240   2e-61

>gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]
          Length = 220

 Score =  250 bits (638), Expect = 2e-64
 Identities = 136/209 (65%), Positives = 145/209 (69%), Gaps = 1/209 (0%)
 Frame = +3

Query: 90  KSSFTSSLTRG-GLVSPKGISGAPLRVLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 266
           KS F SSLTRG GLV+PKGISG+P ++ PS                              
Sbjct: 13  KSKFASSLTRGSGLVTPKGISGSPFKIFPSTRKSCFTIKAVQTDKPTYQVIQPLNGDPF- 71

Query: 267 XXXIGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRN 446
              IGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRN
Sbjct: 72  ---IGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRN 128

Query: 447 TEIXXXXXXXXXXXXVTILSICLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQTADGW 626
           TE             V ILS+CLT+YGI+SFKEGE S APALTLTGRKK PDQLQTA+GW
Sbjct: 129 TEYAGGAGSLAAAGLVVILSMCLTIYGISSFKEGEASTAPALTLTGRKKVPDQLQTAEGW 188

Query: 627 AKXXXXXXXXXISGVTWAYFLLYVLDLPY 713
           +K         ISGVTWAYFLLYVLDLPY
Sbjct: 189 SKFTGGFFFGGISGVTWAYFLLYVLDLPY 217


>ref|XP_002527284.1| Photosystem I reaction center subunit XI, chloroplast precursor,
           putative [Ricinus communis] gi|223533377|gb|EEF35128.1|
           Photosystem I reaction center subunit XI, chloroplast
           precursor, putative [Ricinus communis]
          Length = 218

 Score =  243 bits (620), Expect = 3e-62
 Identities = 133/208 (63%), Positives = 142/208 (68%)
 Frame = +3

Query: 90  KSSFTSSLTRGGLVSPKGISGAPLRVLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 269
           KSSF SS+TRG L  P+GISG P RV P+                               
Sbjct: 13  KSSFASSVTRG-LGVPRGISGNPFRVSPAKRATSFTVKAIQSEKPTFQVIQPINGDPF-- 69

Query: 270 XXIGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNT 449
             IGSLETPVTSSPLIAWYLSNLPAYRTAV+PLLRG+EVGLAHGFLLVGPFVKAGPLRNT
Sbjct: 70  --IGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKAGPLRNT 127

Query: 450 EIXXXXXXXXXXXXVTILSICLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQTADGWA 629
           E             V ILSICLTMYG+ASF EGEPS AP+LTLTGRKK+PDQLQTADGWA
Sbjct: 128 EFAGAAGSLAAGGLVAILSICLTMYGVASFNEGEPSTAPSLTLTGRKKEPDQLQTADGWA 187

Query: 630 KXXXXXXXXXISGVTWAYFLLYVLDLPY 713
           K         ISGV WAYFLLYVL+LPY
Sbjct: 188 KFTGGFFFGGISGVIWAYFLLYVLNLPY 215


>gb|ACG24344.1| photosystem I reaction center subunit XI [Zea mays]
          Length = 219

 Score =  240 bits (613), Expect = 2e-61
 Identities = 131/208 (62%), Positives = 139/208 (66%)
 Frame = +3

Query: 90  KSSFTSSLTRGGLVSPKGISGAPLRVLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 269
           +SSF+S+     L  PKGISGAP  V P+                               
Sbjct: 13  RSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVVQPINGDPF-- 70

Query: 270 XXIGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNT 449
             IGSLETPVTSSPLIAWYLSNLP YRTAVNPLLRGVEVGLAHGF LVGPFVKAGPLRNT
Sbjct: 71  --IGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKAGPLRNT 128

Query: 450 EIXXXXXXXXXXXXVTILSICLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQTADGWA 629
                         V ILS+CLT+YGI+SFKEGEPSIAP+LTLTGRKKQPDQLQTADGWA
Sbjct: 129 AYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQTADGWA 188

Query: 630 KXXXXXXXXXISGVTWAYFLLYVLDLPY 713
           K         ISGVTWAYFLLYVLDLPY
Sbjct: 189 KFTRGFFFGGISGVTWAYFLLYVLDLPY 216


>ref|NP_193016.1| photosystem I reaction center subunit XI [Arabidopsis thaliana]
           gi|18203449|sp|Q9SUI4.2|PSAL_ARATH RecName:
           Full=Photosystem I reaction center subunit XI,
           chloroplastic; Short=PSI-L; AltName: Full=PSI subunit V;
           Flags: Precursor gi|16226622|gb|AAL16216.1|AF428447_1
           AT4g12800/T20K18_150 [Arabidopsis thaliana]
           gi|17933283|gb|AAL48225.1|AF446350_1
           AT4g12800/T20K18_150 [Arabidopsis thaliana]
           gi|4586256|emb|CAB40997.1| probable photosystem I chain
           XI precursor [Arabidopsis thaliana]
           gi|7267981|emb|CAB78322.1| probable photosystem I chain
           XI precursor [Arabidopsis thaliana]
           gi|16649159|gb|AAL24431.1| probable photosystem I chain
           XI precursor [Arabidopsis thaliana]
           gi|20453409|gb|AAM19943.1| AT4g12800/T20K18_150
           [Arabidopsis thaliana] gi|21592939|gb|AAM64889.1|
           probable photosystem I chain XI precursor [Arabidopsis
           thaliana] gi|332657786|gb|AEE83186.1| photosystem I
           reaction center subunit XI [Arabidopsis thaliana]
          Length = 219

 Score =  240 bits (613), Expect = 2e-61
 Identities = 131/208 (62%), Positives = 139/208 (66%)
 Frame = +3

Query: 90  KSSFTSSLTRGGLVSPKGISGAPLRVLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 269
           +SSF+S+     L  PKGISGAP  V P+                               
Sbjct: 13  RSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVVQPINGDPF-- 70

Query: 270 XXIGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNT 449
             IGSLETPVTSSPLIAWYLSNLP YRTAVNPLLRGVEVGLAHGF LVGPFVKAGPLRNT
Sbjct: 71  --IGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKAGPLRNT 128

Query: 450 EIXXXXXXXXXXXXVTILSICLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQTADGWA 629
                         V ILS+CLT+YGI+SFKEGEPSIAP+LTLTGRKKQPDQLQTADGWA
Sbjct: 129 AYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQTADGWA 188

Query: 630 KXXXXXXXXXISGVTWAYFLLYVLDLPY 713
           K         ISGVTWAYFLLYVLDLPY
Sbjct: 189 KFTGGFFFGGISGVTWAYFLLYVLDLPY 216


>sp|Q41385.1|PSAL_SPIOL RecName: Full=Photosystem I reaction center subunit XI,
           chloroplastic; Short=PSI-L; AltName: Full=PSI subunit V;
           Flags: Precursor gi|268612155|pdb|2WSC|L Chain L,
           Improved Model Of Plant Photosystem I
           gi|268612173|pdb|2WSE|L Chain L, Improved Model Of Plant
           Photosystem I gi|268612191|pdb|2WSF|L Chain L, Improved
           Model Of Plant Photosystem I gi|396275|emb|CAA45775.1|
           subunit XI of photosystem I reaction center [Spinacia
           oleracea]
          Length = 216

 Score =  240 bits (612), Expect = 2e-61
 Identities = 132/207 (63%), Positives = 136/207 (65%)
 Frame = +3

Query: 93  SSFTSSLTRGGLVSPKGISGAPLRVLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 272
           S   S  T   LV PKGISG  LR  PS                                
Sbjct: 10  SQLKSGFTTKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQPLNGDPF-- 67

Query: 273 XIGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTE 452
            IG LETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTE
Sbjct: 68  -IGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTE 126

Query: 453 IXXXXXXXXXXXXVTILSICLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQTADGWAK 632
                        V ILS+CLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQ+ADGWAK
Sbjct: 127 YAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQSADGWAK 186

Query: 633 XXXXXXXXXISGVTWAYFLLYVLDLPY 713
                    +SGVTWA FL+YVLDLPY
Sbjct: 187 FTGGFFFGGVSGVTWACFLMYVLDLPY 213


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