BLASTX nr result

ID: Cnidium21_contig00002471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002471
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...   243   2e-62
ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinu...   242   3e-62
ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor...   242   4e-62
ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor...   241   7e-62
ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor...   241   7e-62

>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score =  243 bits (619), Expect = 2e-62
 Identities = 117/141 (82%), Positives = 133/141 (94%)
 Frame = +3

Query: 171 QVLLVIGETRSEKTTQIPHYLHEAGYTKYGNIGCTQPRRVAGISVAARVSK*MGVKLGHE 350
           Q+L+++GET S KTTQIP YLHE+GYTK G +GCTQPRRVA +SVAARVS+ MGVKLGHE
Sbjct: 432 QILVIVGETGSGKTTQIPQYLHESGYTKRGKVGCTQPRRVAAMSVAARVSQEMGVKLGHE 491

Query: 351 VGYAIRFEDCTYEKTVIKYMTDGMLLREFIGEPDLSSYSVVIVDEAHERTVSTDVLFGLV 530
           VGY+IRFEDCT EKTV+KYMTDGMLLREF+GEPDL+SYSVV+VDEAHERT+STD+LFGLV
Sbjct: 492 VGYSIRFEDCTSEKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLV 551

Query: 531 KDIARFRPDLKLIISSATLDA 593
           KDIARFRPDLKL+ISSATLDA
Sbjct: 552 KDIARFRPDLKLLISSATLDA 572


>ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538063|gb|EEF39675.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 756

 Score =  242 bits (618), Expect = 3e-62
 Identities = 117/143 (81%), Positives = 134/143 (93%)
 Frame = +3

Query: 171 QVLLVIGETRSEKTTQIPHYLHEAGYTKYGNIGCTQPRRVAGISVAARVSK*MGVKLGHE 350
           QVL+++GET S KTTQIP YLHEAGYTK G +GCTQPRRVA +SVAARVS+ MGVKLGHE
Sbjct: 416 QVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVSQEMGVKLGHE 475

Query: 351 VGYAIRFEDCTYEKTVIKYMTDGMLLREFIGEPDLSSYSVVIVDEAHERTVSTDVLFGLV 530
           VGY+IRFEDCT EKT++KYMTDGMLLREF+GEPDL+SYSVV+VDEAHERT+STD+LFGLV
Sbjct: 476 VGYSIRFEDCTSEKTLLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLV 535

Query: 531 KDIARFRPDLKLIISSATLDAVR 599
           KDIARFRP+LKL+ISSATLDA +
Sbjct: 536 KDIARFRPELKLLISSATLDAAK 558


>ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Cucumis sativus]
          Length = 1055

 Score =  242 bits (617), Expect = 4e-62
 Identities = 117/141 (82%), Positives = 133/141 (94%)
 Frame = +3

Query: 171 QVLLVIGETRSEKTTQIPHYLHEAGYTKYGNIGCTQPRRVAGISVAARVSK*MGVKLGHE 350
           QVL+++GET S KTTQIP YLHEAGYTK G +GCTQPRRVA +S+AARVS+ +GVKLGHE
Sbjct: 426 QVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHE 485

Query: 351 VGYAIRFEDCTYEKTVIKYMTDGMLLREFIGEPDLSSYSVVIVDEAHERTVSTDVLFGLV 530
           VGY+IRFEDCT +KTV+KYMTDGMLLREF+GEPDL+SYSVV+VDEAHERT+STDVLFGLV
Sbjct: 486 VGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDVLFGLV 545

Query: 531 KDIARFRPDLKLIISSATLDA 593
           KDIARFRPDLKL+ISSATLDA
Sbjct: 546 KDIARFRPDLKLLISSATLDA 566


>ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 2 [Glycine max]
          Length = 1035

 Score =  241 bits (615), Expect = 7e-62
 Identities = 118/141 (83%), Positives = 132/141 (93%)
 Frame = +3

Query: 171 QVLLVIGETRSEKTTQIPHYLHEAGYTKYGNIGCTQPRRVAGISVAARVSK*MGVKLGHE 350
           QVL+++GET S KTTQIP YLHEAGYTK G I CTQPRRVA +SVAARVS+ MGVKLGHE
Sbjct: 413 QVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPRRVAAMSVAARVSQEMGVKLGHE 472

Query: 351 VGYAIRFEDCTYEKTVIKYMTDGMLLREFIGEPDLSSYSVVIVDEAHERTVSTDVLFGLV 530
           VGY+IRFEDCT EKT++KYMTDGMLLREF+GEPDL+SYSVV+VDEAHERT+STD+LFGLV
Sbjct: 473 VGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLV 532

Query: 531 KDIARFRPDLKLIISSATLDA 593
           KDIARFRPDLKL+ISSATLDA
Sbjct: 533 KDIARFRPDLKLLISSATLDA 553


>ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 1 [Glycine max]
          Length = 1044

 Score =  241 bits (615), Expect = 7e-62
 Identities = 118/141 (83%), Positives = 132/141 (93%)
 Frame = +3

Query: 171 QVLLVIGETRSEKTTQIPHYLHEAGYTKYGNIGCTQPRRVAGISVAARVSK*MGVKLGHE 350
           QVL+++GET S KTTQIP YLHEAGYTK G I CTQPRRVA +SVAARVS+ MGVKLGHE
Sbjct: 422 QVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPRRVAAMSVAARVSQEMGVKLGHE 481

Query: 351 VGYAIRFEDCTYEKTVIKYMTDGMLLREFIGEPDLSSYSVVIVDEAHERTVSTDVLFGLV 530
           VGY+IRFEDCT EKT++KYMTDGMLLREF+GEPDL+SYSVV+VDEAHERT+STD+LFGLV
Sbjct: 482 VGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLV 541

Query: 531 KDIARFRPDLKLIISSATLDA 593
           KDIARFRPDLKL+ISSATLDA
Sbjct: 542 KDIARFRPDLKLLISSATLDA 562


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