BLASTX nr result
ID: Cnidium21_contig00002471
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00002471 (604 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor... 243 2e-62 ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinu... 242 3e-62 ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor... 242 4e-62 ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor... 241 7e-62 ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor... 241 7e-62 >ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like [Vitis vinifera] Length = 1056 Score = 243 bits (619), Expect = 2e-62 Identities = 117/141 (82%), Positives = 133/141 (94%) Frame = +3 Query: 171 QVLLVIGETRSEKTTQIPHYLHEAGYTKYGNIGCTQPRRVAGISVAARVSK*MGVKLGHE 350 Q+L+++GET S KTTQIP YLHE+GYTK G +GCTQPRRVA +SVAARVS+ MGVKLGHE Sbjct: 432 QILVIVGETGSGKTTQIPQYLHESGYTKRGKVGCTQPRRVAAMSVAARVSQEMGVKLGHE 491 Query: 351 VGYAIRFEDCTYEKTVIKYMTDGMLLREFIGEPDLSSYSVVIVDEAHERTVSTDVLFGLV 530 VGY+IRFEDCT EKTV+KYMTDGMLLREF+GEPDL+SYSVV+VDEAHERT+STD+LFGLV Sbjct: 492 VGYSIRFEDCTSEKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLV 551 Query: 531 KDIARFRPDLKLIISSATLDA 593 KDIARFRPDLKL+ISSATLDA Sbjct: 552 KDIARFRPDLKLLISSATLDA 572 >ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinus communis] gi|223538063|gb|EEF39675.1| ATP-dependent RNA helicase, putative [Ricinus communis] Length = 756 Score = 242 bits (618), Expect = 3e-62 Identities = 117/143 (81%), Positives = 134/143 (93%) Frame = +3 Query: 171 QVLLVIGETRSEKTTQIPHYLHEAGYTKYGNIGCTQPRRVAGISVAARVSK*MGVKLGHE 350 QVL+++GET S KTTQIP YLHEAGYTK G +GCTQPRRVA +SVAARVS+ MGVKLGHE Sbjct: 416 QVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVSQEMGVKLGHE 475 Query: 351 VGYAIRFEDCTYEKTVIKYMTDGMLLREFIGEPDLSSYSVVIVDEAHERTVSTDVLFGLV 530 VGY+IRFEDCT EKT++KYMTDGMLLREF+GEPDL+SYSVV+VDEAHERT+STD+LFGLV Sbjct: 476 VGYSIRFEDCTSEKTLLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLV 535 Query: 531 KDIARFRPDLKLIISSATLDAVR 599 KDIARFRP+LKL+ISSATLDA + Sbjct: 536 KDIARFRPELKLLISSATLDAAK 558 >ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like [Cucumis sativus] Length = 1055 Score = 242 bits (617), Expect = 4e-62 Identities = 117/141 (82%), Positives = 133/141 (94%) Frame = +3 Query: 171 QVLLVIGETRSEKTTQIPHYLHEAGYTKYGNIGCTQPRRVAGISVAARVSK*MGVKLGHE 350 QVL+++GET S KTTQIP YLHEAGYTK G +GCTQPRRVA +S+AARVS+ +GVKLGHE Sbjct: 426 QVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHE 485 Query: 351 VGYAIRFEDCTYEKTVIKYMTDGMLLREFIGEPDLSSYSVVIVDEAHERTVSTDVLFGLV 530 VGY+IRFEDCT +KTV+KYMTDGMLLREF+GEPDL+SYSVV+VDEAHERT+STDVLFGLV Sbjct: 486 VGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDVLFGLV 545 Query: 531 KDIARFRPDLKLIISSATLDA 593 KDIARFRPDLKL+ISSATLDA Sbjct: 546 KDIARFRPDLKLLISSATLDA 566 >ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform 2 [Glycine max] Length = 1035 Score = 241 bits (615), Expect = 7e-62 Identities = 118/141 (83%), Positives = 132/141 (93%) Frame = +3 Query: 171 QVLLVIGETRSEKTTQIPHYLHEAGYTKYGNIGCTQPRRVAGISVAARVSK*MGVKLGHE 350 QVL+++GET S KTTQIP YLHEAGYTK G I CTQPRRVA +SVAARVS+ MGVKLGHE Sbjct: 413 QVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPRRVAAMSVAARVSQEMGVKLGHE 472 Query: 351 VGYAIRFEDCTYEKTVIKYMTDGMLLREFIGEPDLSSYSVVIVDEAHERTVSTDVLFGLV 530 VGY+IRFEDCT EKT++KYMTDGMLLREF+GEPDL+SYSVV+VDEAHERT+STD+LFGLV Sbjct: 473 VGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLV 532 Query: 531 KDIARFRPDLKLIISSATLDA 593 KDIARFRPDLKL+ISSATLDA Sbjct: 533 KDIARFRPDLKLLISSATLDA 553 >ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform 1 [Glycine max] Length = 1044 Score = 241 bits (615), Expect = 7e-62 Identities = 118/141 (83%), Positives = 132/141 (93%) Frame = +3 Query: 171 QVLLVIGETRSEKTTQIPHYLHEAGYTKYGNIGCTQPRRVAGISVAARVSK*MGVKLGHE 350 QVL+++GET S KTTQIP YLHEAGYTK G I CTQPRRVA +SVAARVS+ MGVKLGHE Sbjct: 422 QVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPRRVAAMSVAARVSQEMGVKLGHE 481 Query: 351 VGYAIRFEDCTYEKTVIKYMTDGMLLREFIGEPDLSSYSVVIVDEAHERTVSTDVLFGLV 530 VGY+IRFEDCT EKT++KYMTDGMLLREF+GEPDL+SYSVV+VDEAHERT+STD+LFGLV Sbjct: 482 VGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLV 541 Query: 531 KDIARFRPDLKLIISSATLDA 593 KDIARFRPDLKL+ISSATLDA Sbjct: 542 KDIARFRPDLKLLISSATLDA 562