BLASTX nr result

ID: Cnidium21_contig00002454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002454
         (1378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...   120   6e-25
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              120   6e-25
emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]   110   7e-22
ref|XP_002515641.1| RNA binding protein, putative [Ricinus commu...   109   1e-21
ref|XP_004164662.1| PREDICTED: uncharacterized LOC101218122 [Cuc...   108   2e-21

>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score =  120 bits (302), Expect = 6e-25
 Identities = 92/304 (30%), Positives = 144/304 (47%), Gaps = 3/304 (0%)
 Frame = +3

Query: 300  ESRYQDDNMMIDEVGNINDDQPLSMWLNALPPVG-SDDSRALPVRDQCANAKGRNEGFET 476
            +S+ +   M +  V ++ DDQPL MW   +   G +D+S+  P   Q  N    NE  E 
Sbjct: 948  DSKTKQVEMAVSGVHSVPDDQPLKMWFEGMHSPGVADNSKLSP--GQTVNQW--NEARE- 1002

Query: 477  PLLAKVDTVKPSLLQKTDGPDPGDLPIKNLNGCAESNGKGCELGTPAIISIDTVEDQSLP 656
                     +PS + ++   DP    + +LN                         QSLP
Sbjct: 1003 ---------RPSEVTQSPRIDPTGEIMLDLN-------------------------QSLP 1028

Query: 657  FVKRSPLWKVVDSMELYKKT-QKPHFSPLVKHIEETREGLAIGTMVNFSNLVESTLKLQF 833
            FVK SP+W  ++++E++++  QKPHF PL    EE REGLAIG MV FS L+E   KL+F
Sbjct: 1029 FVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLRF 1088

Query: 834  SCDITIIERSLENLAEFESHGFDVEKVRACLTQLLSKKQTAIELQKEYDNIGSEIY-NSF 1010
                +I   SLE L E E HGFD + V++ + +L+  K    +L+     + ++I  ++ 
Sbjct: 1089 DDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIMEHTH 1148

Query: 1011 DEGKLDEEINXXXXXXXXXXXXXXXXXXXXXXXXXXMSALQTRRGVVGESVQSLQAEFES 1190
            ++ K+DEEI                           ++AL +    + ES+QS + +FE 
Sbjct: 1149 EKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNESIQSARQDFER 1208

Query: 1191 IAGS 1202
            +A S
Sbjct: 1209 VATS 1212


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  120 bits (302), Expect = 6e-25
 Identities = 92/304 (30%), Positives = 144/304 (47%), Gaps = 3/304 (0%)
 Frame = +3

Query: 300  ESRYQDDNMMIDEVGNINDDQPLSMWLNALPPVG-SDDSRALPVRDQCANAKGRNEGFET 476
            +S+ +   M +  V ++ DDQPL MW   +   G +D+S+  P   Q  N    NE  E 
Sbjct: 808  DSKTKQVEMAVSGVHSVPDDQPLKMWFEGMHSPGVADNSKLSP--GQTVNQW--NEARE- 862

Query: 477  PLLAKVDTVKPSLLQKTDGPDPGDLPIKNLNGCAESNGKGCELGTPAIISIDTVEDQSLP 656
                     +PS + ++   DP    + +LN                         QSLP
Sbjct: 863  ---------RPSEVTQSPRIDPTGEIMLDLN-------------------------QSLP 888

Query: 657  FVKRSPLWKVVDSMELYKKT-QKPHFSPLVKHIEETREGLAIGTMVNFSNLVESTLKLQF 833
            FVK SP+W  ++++E++++  QKPHF PL    EE REGLAIG MV FS L+E   KL+F
Sbjct: 889  FVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLRF 948

Query: 834  SCDITIIERSLENLAEFESHGFDVEKVRACLTQLLSKKQTAIELQKEYDNIGSEIY-NSF 1010
                +I   SLE L E E HGFD + V++ + +L+  K    +L+     + ++I  ++ 
Sbjct: 949  DDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIMEHTH 1008

Query: 1011 DEGKLDEEINXXXXXXXXXXXXXXXXXXXXXXXXXXMSALQTRRGVVGESVQSLQAEFES 1190
            ++ K+DEEI                           ++AL +    + ES+QS + +FE 
Sbjct: 1009 EKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNESIQSARQDFER 1068

Query: 1191 IAGS 1202
            +A S
Sbjct: 1069 VATS 1072


>emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]
          Length = 1348

 Score =  110 bits (276), Expect = 7e-22
 Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
 Frame = +3

Query: 642  DQSLPFVKRSPLWKVVDSMELYKKT-QKPHFSPLVKHIEETREGLAIGTMVNFSNLVEST 818
            +QSLPFVK SP+W  ++++E++++  QKPHF PL    EE REGLAIG MV FS L+E  
Sbjct: 1006 NQSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKV 1065

Query: 819  LKLQFSCDITIIERSLENLAEFESHGFDVEKVRACLTQLLSKKQTAIELQKEYDNIGSEI 998
             KL+F    +I   SLE L E E HGFD + V++ + +L+  K    +L+     + ++I
Sbjct: 1066 AKLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQI 1125

Query: 999  Y-NSFDEGKLDEEINXXXXXXXXXXXXXXXXXXXXXXXXXXMSALQTRRGVVGESVQSLQ 1175
              ++ ++ K+DEEI                           ++AL +    + ES+QS +
Sbjct: 1126 MEHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALLSSADAMNESIQSAR 1185

Query: 1176 AEFE 1187
             +FE
Sbjct: 1186 QDFE 1189


>ref|XP_002515641.1| RNA binding protein, putative [Ricinus communis]
            gi|223545235|gb|EEF46743.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 683

 Score =  109 bits (273), Expect = 1e-21
 Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 6/195 (3%)
 Frame = +3

Query: 630  DTVEDQSLPFVKRSPLWKVVDSMELYKKT-QKPHFSPLVKHIEETREGLAIGTMVNFSNL 806
            + VE+  +PF K S +WK ++S+E+++   QKPHFSPL++H EE+REG+A+G M++F+ L
Sbjct: 489  ELVENLEMPFFKSSLIWKNIESLEVFQVLPQKPHFSPLIRHKEESREGMAMGHMLSFAVL 548

Query: 807  VESTLKLQFSCDITIIERSLENLAEFESHGFDVEKVRACLTQLLSKKQTAIELQKEYDNI 986
            +E   KLQ      + +  +E LA+ E HGF VE +  CL +LLS K     L+ E    
Sbjct: 549  IEKMSKLQVDDGREVFDSYMEVLADLEMHGFQVEAIAECLEKLLSIKDRCKRLEDE---- 604

Query: 987  GSEIYNSFDEG-----KLDEEINXXXXXXXXXXXXXXXXXXXXXXXXXXMSALQTRRGVV 1151
              +++    EG     KL+E+I+                          +  LQ     V
Sbjct: 605  AKKVHIGMAEGKHEKIKLEEDIDKIEKRISLLEEQRAMKVSMKMMKDSELITLQVNANAV 664

Query: 1152 GESVQSLQAEFESIA 1196
             E + +++ EFE++A
Sbjct: 665  NEDIVNMEHEFENVA 679


>ref|XP_004164662.1| PREDICTED: uncharacterized LOC101218122 [Cucumis sativus]
          Length = 566

 Score =  108 bits (271), Expect = 2e-21
 Identities = 105/338 (31%), Positives = 162/338 (47%), Gaps = 6/338 (1%)
 Frame = +3

Query: 45   VMSTSVDEIPNNGDILVSSKESTAVSTFDRKLRSGVCRQNGVVGKTAHIPLLNDQAGE-- 218
            ++ T +DE   +G+ LV S    + +   ++L+    ++ G   K   +P   + + +  
Sbjct: 220  LLKTVIDE---SGEGLVKSCRKLSSNKLVKQLQ----KKRGRPRKLMLVPTTAEDSNKDG 272

Query: 219  TVPSERVDRLKNSVSNGHGEMIRTVDSE-SRYQDDNMMIDEVGNINDDQPLSMWLNALPP 395
            +V       LK+SV+    ++ R   SE S Y+ +    + V +  DD+PL MWL  +  
Sbjct: 273  SVWKPEKATLKSSVT----DLNRRNGSEISAYKTNGSGTNSVDD--DDRPLLMWLGGIQ- 325

Query: 396  VGSDDSRALPVRDQC-ANAKGRNEGFETPLLAKVDTVKPSLLQKTDGPDPGDLPIKNLNG 572
             GS  + AL +     ++AK R +G E     +VD V                       
Sbjct: 326  -GSASNNALKLGQASGSSAKRRTKGSE-----QVDAV----------------------- 356

Query: 573  CAESNGKGCELGTPAIISIDTVEDQSLPFVKRSPLWKVVDSMELYKKT-QKPHFSPLVKH 749
                NG     GTP     +  ++Q  PFVK SP+W  +DS+E++K   QKPHF PL  H
Sbjct: 357  ----NGVRRVDGTP---EHEVDKNQDWPFVKNSPVWSAIDSLEVFKHIPQKPHFQPLSTH 409

Query: 750  IEETREGLAIGTMVNFSNLVESTLKLQFSCDITIIERSLENLAEFESHGFDVEKVRACLT 929
             EE REGLAIG MV F++LVE   KLQFS    I E +L +L E E HGF++  +   + 
Sbjct: 410  KEECREGLAIGCMVTFASLVEKITKLQFSNPRHIFESTLASLYELEQHGFNISMLCNRVN 469

Query: 930  QLLSKKQTAIELQKEYDNIGSEIYNSFD-EGKLDEEIN 1040
            +LL  K + +   +E     ++I    + + KL EE N
Sbjct: 470  ELLFIKDSEMRYGEETKVTENKIMEYIENKTKLAEESN 507


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