BLASTX nr result

ID: Cnidium21_contig00002453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002453
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [...   128   6e-28
ref|XP_004141068.1| PREDICTED: 40S ribosomal protein S3-3-like [...   128   6e-28
ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis...   128   6e-28
ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis...   128   6e-28
ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volv...   127   1e-27

>ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
           gi|449521735|ref|XP_004167885.1| PREDICTED: 40S
           ribosomal protein S3-3-like [Cucumis sativus]
          Length = 236

 Score =  128 bits (321), Expect = 6e-28
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = +3

Query: 174 MATQLSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 353
           MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 354 EKGRRI 371
           EKGRRI
Sbjct: 61  EKGRRI 66


>ref|XP_004141068.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
           gi|449488075|ref|XP_004157933.1| PREDICTED: 40S
           ribosomal protein S3-3-like [Cucumis sativus]
          Length = 243

 Score =  128 bits (321), Expect = 6e-28
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = +3

Query: 174 MATQLSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 353
           MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 354 EKGRRI 371
           EKGRRI
Sbjct: 61  EKGRRI 66


>ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
           gi|297738588|emb|CBI27833.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  128 bits (321), Expect = 6e-28
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = +3

Query: 174 MATQLSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 353
           MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 354 EKGRRI 371
           EKGRRI
Sbjct: 61  EKGRRI 66


>ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
           gi|297743020|emb|CBI35887.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  128 bits (321), Expect = 6e-28
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = +3

Query: 174 MATQLSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 353
           MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 354 EKGRRI 371
           EKGRRI
Sbjct: 61  EKGRRI 66


>ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
            nagariensis] gi|300269048|gb|EFJ53228.1| hypothetical
            protein VOLCADRAFT_120230 [Volvox carteri f. nagariensis]
          Length = 1596

 Score =  127 bits (319), Expect = 1e-27
 Identities = 64/71 (90%), Positives = 68/71 (95%)
 Frame = +3

Query: 159  NSVLKMATQLSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRT 338
            N + KMA Q+SKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRT
Sbjct: 1362 NLLAKMAVQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRT 1421

Query: 339  QNVLGEKGRRI 371
            QNVLGEKGRRI
Sbjct: 1422 QNVLGEKGRRI 1432


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